EWM27914.1, cds2764 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|585110253|gb|EWM27914.1| (histone deacetylase superfamily protein [Nannochloropsis gaditana]) HSP 1 Score: 818.535 bits (2113), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
Query: 1 MAANAGAGTKLSSALTKSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKRRMAGMK 392
MAANAGAGTKLSSALTKSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKRRMAGMK
Sbjct: 1 MAANAGAGTKLSSALTKSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKRRMAGMK 392
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|1125275764|gb|OLC20517.1| (class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_66_19] >gi|1125307044|gb|OLC49912.1| class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_4_65_16] >gi|1125563321|gb|OLE72623.1| class II histone deacetylase [Actinobacteria bacterium 13_1_20CM_2_66_18]) HSP 1 Score: 410.223 bits (1053), Expect = 5.190e-139 Identity = 199/366 (54.37%), Postives = 263/366 (71.86%), Query Frame = 0
Query: 19 TTGYVWHERYMWHHAGKYTW----NEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEAL 380
TTG+VWHE Y WH G W +QP H E+ E KRR+ NL++ SGL+D LV + PR A+ EE+ HT EYV +I+ S GG+AG+ FGPGSY+IA LAVGG + A+DAV+ G+ D NAY L RPPGHHAE+D G GFC+F NVAL A+HAR +GL RVA+VD+DVHHGNGT+ AFY+D +VL ISIHQD+NYP ++G + + G+G GEG IN+PLP GSG GAY AF+R ++PA+RA+ PEL++++SG DA +DPLA+MM++S+ +R L Q + G+A++VC GR+V HEGGYS YVP+CG AI+EEL RT + D +L + +G QELQPHQ+AVI++ L
Sbjct: 2 TTGFVWHELYAWHDTGTGAWVIPAGLTVQPLGHLENSEGKRRIRNLIEVSGLIDHLVMLKPRAATEEEILGLHTSEYVDRIRRESSQLGGDAGELTPFGPGSYDIALLAVGGCITAVDAVLDGKVD------NAYALVRPPGHHAERDTGRGFCIFGNVALTAIHARQLRGLSRVAVVDWDVHHGNGTEHAFYDDPSVLTISIHQDNNYPPNSGAITDTGSGAGEGYNINVPLPAGSGVGAYVAAFERAVVPALRAYQPELIIIASGLDASAMDPLASMMMTSDGYRKLTQLMLGVADEVCAGRLVMCHEGGYSPAYVPYCGLAIMEELAGMRTELADPLLDLLASFGGQELQPHQEAVIQEAMKL 361
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|567945527|gb|ETK71338.1| (hypothetical protein L915_21408 [Phytophthora parasitica] >gi|567974182|gb|ETL24783.1| hypothetical protein L916_21274 [Phytophthora parasitica] >gi|570311725|gb|ETO59673.1| hypothetical protein F444_22020 [Phytophthora parasitica P1976] >gi|570935497|gb|ETP00754.1| hypothetical protein F441_21891 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 401.749 bits (1031), Expect = 1.071e-135 Identity = 198/373 (53.08%), Postives = 258/373 (69.17%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLS-RAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMH--ARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTG---VRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKR 386
GYV+ ERY+WH ++ ++P RH+ESPE+KRR H+LL SGLLD LV + P +A+ +L R HT YV K++ LS R +GG AG+ A F +++IA L+ GGVL A+DAV+ GR +T AY L RPPGHHA DRGMGFCL NNVA+ A H +KR+AIVDYDVHHGNGTQ+AFY+D VLF+S+HQ +NYPA +G + E G GKG G+ IN+PLPPGSGSGAY AF V++PA+ +F P+ +LVSSG+DA Y DPLA M+LSS FR + +L+ A+ +C GRIV+ HEGGYS+ YVPFCG A++EEL + ++D L +V +W YQELQ HQ V+ L TA K+
Sbjct: 3 VGYVFDERYLWHRPWSQQYSSLVEPFRHWESPETKRRFHSLLAVSGLLDQLVTIKPLIATKAQLERVHTRRYVEKMERLSAREEGGNAGEEAPFSQFAFDIAQLSAGGVLAAVDAVMDGRVNT------AYALTRPPGHHAVADRGMGFCLLNNVAISAKHLLETYTTRIKRIAIVDYDVHHGNGTQEAFYDDNRVLFVSLHQANNYPADSGAIIERGEGKGLGSNINLPLPPGSGSGAYEYAFKSVVVPALESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHELSEAAKRLCGGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDADKQIKDPFLDEVERWEYQELQEHQRKVVDTVVELQTAPKQ 369
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|675212617|ref|XP_008915193.1| (hypothetical protein PPTG_18708 [Phytophthora parasitica INRA-310] >gi|566008042|gb|ETI30953.1| hypothetical protein F443_21999 [Phytophthora parasitica P1569] >gi|568003659|gb|ETL78005.1| hypothetical protein L917_21123 [Phytophthora parasitica] >gi|568084526|gb|ETM99454.1| hypothetical protein PPTG_18708 [Phytophthora parasitica INRA-310] >gi|970629678|gb|KUF76865.1| Histone deacetylase amidohydrolase [Phytophthora nicotianae]) HSP 1 Score: 400.979 bits (1029), Expect = 1.639e-135 Identity = 198/373 (53.08%), Postives = 258/373 (69.17%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLS-RAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMH--ARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTG---VRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKR 386
GYV+ ERY+WH ++ ++P RH+ESPE+KRR H+LL SGLLD LV + P +A+ +L R HT YV K++ LS R +GG AG+ A F +++IA L+ GGVL A+DAV+ GR +T AY L RPPGHHA DRGMGFCL NNVA+ A H +KR+AIVDYDVHHGNGTQ+AFY+D VLF+S+HQ +NYPA +G + E G GKG G+ IN+PLPPGSGSGAY AF V++PA+ +F P+ +LVSSG+DA Y DPLA M+LSS FR + +L+ A+ +C GRIV+ HEGGYS+ YVPFCG A++EEL + ++D L +V +W YQELQ HQ V+ L TA K+
Sbjct: 3 VGYVFDERYLWHRPWSQQYSSLVEPFRHWESPETKRRFHSLLAVSGLLDQLVPIKPLIATKAQLERVHTRRYVEKMERLSAREEGGNAGEEAPFSQFAFDIAQLSAGGVLAAVDAVMDGRVNT------AYALTRPPGHHAVADRGMGFCLLNNVAISAKHLLETYTTRIKRIAIVDYDVHHGNGTQEAFYDDNRVLFVSLHQANNYPADSGAIIERGEGKGLGSNINLPLPPGSGSGAYEYAFKSVVVPALESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHELSEAAKRLCGGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDADKQIKDPFLDEVERWEYQELQEHQRKVVDTVVELQTAPKQ 369
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|568033564|gb|ETM31266.1| (hypothetical protein L914_21140 [Phytophthora parasitica]) HSP 1 Score: 400.979 bits (1029), Expect = 1.868e-135 Identity = 198/373 (53.08%), Postives = 258/373 (69.17%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLS-RAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMH--ARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTG---VRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKR 386
GYV+ ERY+WH ++ ++P RH+ESPE+KRR H+LL SGLLD LV + P +A+ +L R HT YV K++ LS R +GG AG+ A F +++IA L+ GGVL A+DAV+ GR +T AY L RPPGHHA DRGMGFCL NNVA+ A H +KR+AIVDYDVHHGNGTQ+AFY+D VLF+S+HQ +NYPA +G + E G GKG G+ IN+PLPPGSGSGAY AF V++PA+ +F P+ +LVSSG+DA Y DPLA M+LSS FR + +L+ A+ +C GRIV+ HEGGYS+ YVPFCG A++EEL + ++D L +V +W YQELQ HQ V+ L TA K+
Sbjct: 3 VGYVFDERYLWHRPWSQQYSSLVEPFRHWESPETKRRFHSLLAVSGLLDQLVPIKPLIATKAQLERVHTRRYVEKMERLSAREEGGNAGEEAPFSQFAFDIAQLSAGGVLAAVDAVMDGRVNT------AYALTRPPGHHAVTDRGMGFCLLNNVAISAKHLLETYTTRIKRIAIVDYDVHHGNGTQEAFYDDNRVLFVSLHQANNYPADSGAIIERGEGKGLGSNINLPLPPGSGSGAYEYAFKSVVVPALESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHELSEAAKRLCGGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDADKQIKDPFLDEVERWEYQELQEHQRKVVDTVVELQTAPKQ 369
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|570965782|gb|ETP28901.1| (hypothetical protein F442_21866 [Phytophthora parasitica P10297]) HSP 1 Score: 399.053 bits (1024), Expect = 1.070e-134 Identity = 197/373 (52.82%), Postives = 257/373 (68.90%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLS-RAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMH--ARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTG---VRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKR 386
GYV+ ERY+WH ++ ++P RH+ESPE+KRR H+LL SGLLD LV + P +A+ +L R HT YV K++ LS R +GG AG+ A F +++IA L+ GGVL A+DAV+ GR +T AY L RPPGHHA DRGMGFCL NNVA+ A H +KR+AIVDYDVHHGNGTQ+AFY+D VLF+S+HQ +NYPA +G + E G GKG G+ IN+PLPPGSGSGAY AF V++PA+ +F P+ +LVSSG+DA Y DPLA M+LSS FR + +L+ A+ +C GRIV+ HEGGYS+ YVPFCG A++EEL + ++D L +V +W YQELQ HQ V+ L A K+
Sbjct: 3 VGYVFDERYLWHRPWSQQYSSLVEPFRHWESPETKRRFHSLLAVSGLLDQLVPIKPLIATKAQLERVHTRRYVEKMERLSAREEGGNAGEEAPFSQFAFDIAQLSAGGVLAAVDAVMDGRVNT------AYALTRPPGHHAVADRGMGFCLLNNVAISAKHLLETYTTRIKRIAIVDYDVHHGNGTQEAFYDDNRVLFVSLHQANNYPADSGAIIERGEGKGLGSNINLPLPPGSGSGAYEYAFKSVVVPALESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHELSEAAKRLCGGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDADKQIKDPFLDEVERWEYQELQEHQRKVVDTVVELQAAPKQ 369
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|301102851|ref|XP_002900512.1| (histone deacetylase, putative [Phytophthora infestans T30-4] >gi|262101775|gb|EEY59827.1| histone deacetylase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 397.512 bits (1020), Expect = 4.369e-134 Identity = 190/361 (52.63%), Postives = 257/361 (71.19%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLS-RAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMH--ARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRR---TGVRDCMLTDVHQWGYQELQPHQDAVI 374
GYV+ ERY+WH ++ +++P RH+ESPE+KRR H+LL SGLLD LV + P++A++ +L R HT Y+ +++ LS R +GG AG+ A F +++IA L+ GGVL A+DAV+ GR DT AY L RPPGHHA DRGMGFCL NNVA+ A H +K++AIVDYDVHHGNGTQ+AFY+D+ VLF+S+HQ +NYPA TG + E G KG G T+N+PLPPGSGSGAY AF V++P++ +F P+ +LVSSG+DA Y DPLA M+LSS FR + ++ +A+ +C GRIV+ HEGGYS+ YVPFCG A++EEL + ++D L++V +W YQELQ HQ V+
Sbjct: 3 VGYVYDERYLWHRPWSQQYSAFVEPFRHWESPETKRRFHSLLAVSGLLDQLVTIRPQIATMIQLERVHTRRYLEELEQLSAREEGGNAGEEAPFSQLAFDIARLSAGGVLAAVDAVMEGRVDT------AYALTRPPGHHAVADRGMGFCLLNNVAITAKHLLETYSSQIKKIAIVDYDVHHGNGTQEAFYDDDRVLFVSLHQANNYPADTGKITERGEDKGLGFTVNVPLPPGSGSGAYEYAFRNVVIPSLESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHEVVDVAKRICAGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDVDKQIKDPFLSEVERWEYQELQEHQKKVV 357
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|751285502|ref|WP_040994237.1| (class II histone deacetylase [Mesorhizobium sp. SOD10] >gi|685087662|emb|CDX18467.1| Histone deacetylase-like amidohydrolase [Mesorhizobium sp. SOD10]) HSP 1 Score: 392.889 bits (1008), Expect = 2.801e-132 Identity = 192/375 (51.20%), Postives = 254/375 (67.73%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEW---------IQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALK 385
TG+V+HE Y+WH+ TWN W +QP H E+PE+KRRL NLL+ SG+LD LV + PR A+VEEL+R HT ++ KI+ +S G+A G GSYEIA LA GG + AI+AV+TG+ D NAY L RPPGHHA D GMGFCLF+N A+ HA+ GL R+A VD+DVHHGNGTQ FY+D +VL IS+HQD+ +PA++G + ENG GKG+G IN+PLPPGSG GAY AF+RV++PA+ F PEL++V SG+DA +DP+ M+++S +R L + L A ++C GR+V HEGGYS++YVP+CG A++EEL RTGV D + QWG QPHQ A+I + LV +
Sbjct: 3 TGFVFHELYLWHN----TWN-WAQVFPPSLTVQPGTHAENPETKRRLRNLLEVSGILDHLVTIKPRRATVEELSRVHTPAHIAKIREISDRGYGDASSLTPLGAGSYEIALLAAGGAIKAIEAVITGQVD------NAYALIRPPGHHATADVGMGFCLFSNAAIAIRHAQQLHGLTRIATVDWDVHHGNGTQAIFYDDPSVLSISLHQDNLFPANSGAIAENGEGKGKGFNINVPLPPGSGPGAYAAAFERVVIPALTRFKPELIVVPSGFDASGVDPMGRMLMNSSGYRRLARMLLDAARELCGGRLVMTHEGGYSEMYVPYCGLAVIEELCGHRTGVEDPWDQLMGQWGGMSAQPHQTAIIDQAAELVKNIN 366
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|1184557785|ref|WP_085124717.1| (class II histone deacetylase [Tistlia consotensis] >gi|1182742834|emb|SMF55776.1| Acetoin utilization deacetylase AcuC [Tistlia consotensis USBA 355]) HSP 1 Score: 391.349 bits (1004), Expect = 9.193e-132 Identity = 197/375 (52.53%), Postives = 251/375 (66.93%), Query Frame = 0
Query: 20 TGYVWHERYMWHHAGKYTWNEW---------IQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALK 385
TG+V+HE YMWH+ TWN W +QP H E+PE+KRR NLL+ SGLLD L+ + R AS +E+ RFHT +Y+ +I+ S GG+A FG GS+EIA L+ GG + A DAV+TG VRNAY L RPPGHHA D G+GFCLF NVAL MHAR GL R+A VD+DVHHGNGTQ AFY D L +SIHQD+ YP +G ++E G G G G +NIPLPPGSG GAY AF+RV+LPA+R F PEL++V SG+DA +DPL MM+SSE +R + + L A+++C GR+V HEGGYS YVP+CG A++EEL+ RTGV D + WG Q L PHQ+AVI+ A + ++
Sbjct: 3 TGFVFHEIYMWHN----TWN-WAQVFPPSLTVQPGEHAENPETKRRFRNLLEVSGLLDRLLPLKARAASEDEIARFHTRDYIERIKRASAGSGGDASHLTPFGTGSFEIAQLSAGGTMAAFDAVITG------AVRNAYALVRPPGHHAIADAGLGFCLFGNVALAIMHARAVHGLGRIATVDWDVHHGNGTQAAFYSDPTTLTLSIHQDNLYPPDSGGLDEIGEGAGRGYNLNIPLPPGSGDGAYLAAFERVVLPALRRFRPELIVVPSGFDASGVDPLGRMMVSSEGYRAMTRLLLDAADELCAGRLVMSHEGGYSATYVPYCGLAVLEELSGFRTGVEDPWGPLMAGWGGQALAPHQEAVIEAAAARLAGIR 366
BLAST of EWM27914.1 vs. NCBI_GenBank
Match: gi|1125232439|gb|OLB80247.1| (class II histone deacetylase [Actinobacteria bacterium 13_2_20CM_2_66_6]) HSP 1 Score: 390.193 bits (1001), Expect = 2.260e-131 Identity = 190/361 (52.63%), Postives = 254/361 (70.36%), Query Frame = 0
Query: 29 MWHHAGKYTW----NEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDKVRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALK 385
MWH G W +QP H E+ E KRR+ NL++ SGL+D LV + PR A+ +E+ R HT EYV +I+ S GG+AG+ FGPGSYEIA LA GG + A+DAVV G+ D NAY L RPPGHHAE+D G GFC+F NVA+ A HAR +GL+RVA+VD+DVHHGNGT+ AFY+D +VL ISIHQD+NYP ++G + + G+G G+G IN+PLP GSG GAY F+RV+ PA+R + PEL++V+SG DA +DPLA+MM++S+ +R L Q + G+A +VC GR+V HEGGYS YVPFCG AI+EEL RT + D +L + +G Q+LQPHQ+AV+++ L ++
Sbjct: 1 MWHDTGTGAWVIPAGLTVQPLGHLENAEGKRRIRNLIEVSGLIDHLVLLKPRAATEDEVLRLHTREYVDRIKDESSKMGGDAGELTPFGPGSYEIALLAAGGCIAAVDAVVDGKVD------NAYALVRPPGHHAERDTGRGFCIFANVAIAATHARQVRGLRRVAVVDWDVHHGNGTEHAFYDDPSVLTISIHQDNNYPPNSGAMTDTGSGAGKGYNINVPLPAGSGVGAYVATFERVVAPALRNYRPELIIVASGLDASAMDPLASMMMTSDGYRKLTQVMLGVAHEVCGGRLVMCHEGGYSPAYVPFCGLAIMEELAGVRTELADPLLDLLASFGGQDLQPHQEAVLREAMKLAAGVR 355 The following BLAST results are available for this feature:
BLAST of EWM27914.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|