EWM27921.1, cds2754 (CDS) Nannochloropsis gaditana

Overview
NameEWM27921.1
Unique Namecds2754
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1144429..1144735 +
Alignment locationCM002459.1:1144948..1145111 +
Alignment locationCM002459.1:1145412..1145771 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27921.1
ProductMethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100285g8.3542.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1144429..1144735 +
CM002459.1supercontigCM002459.1:1144948..1145111 +
CM002459.1supercontigCM002459.1:1145412..1145771 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|553189114|ref|XP_005854934.1| (hypothetical protein NGA_0388400 [Nannochloropsis gaditana CCMP526] >gi|422294122|gb|EKU21422.1| hypothetical protein NGA_0388400 [Nannochloropsis gaditana CCMP526] >gi|585110261|gb|EWM27921.1| Methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
Query:    1 MRSLQHWSRAASCFCALPVTAFIAPTFSQSCSDVASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEATSG 276
            MRSLQHWSRAASCFCALPVTAFIAPTFSQSCSDVASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEATSG
Sbjct:    1 MRSLQHWSRAASCFCALPVTAFIAPTFSQSCSDVASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEATSG 276          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|298710415|emb|CBJ25479.1| (B1142C05.17 [Ectocarpus siliculosus])

HSP 1 Score: 299.286 bits (765), Expect = 1.073e-98
Identity = 144/236 (61.02%), Postives = 171/236 (72.46%), Query Frame = 0
Query:   35 ASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKK 270
            A+ P+ +     +  V   +VLK PKWPE+  F   D+ R DESSD  FYS PR V HIDD A+KALT YYA   P  A+VLDICSSW+SH+P+  +  +  G+GMN+ EL+KN QLDEY VKDLNVD   PF D SFDVVTCVVSVDYL +PLEVF EI RVL+PGG  IMSMSNRCFPTKA+ IW +T D  H+FIVG+YF Y    F+PP + DISPNPGRSDPM+IV+  KK
Sbjct:   42 ATRPAGSTALFASGGVSAEEVLKAPKWPEKWPFYEDDFSRMDESSDGDFYSQPRLVYHIDDSAVKALTKYYAKALPKGADVLDICSSWVSHFPKDWEHGKRTGLGMNEFELSKNVQLDEYKVKDLNVDAKFPFEDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGG-FDPPVSRDISPNPGRSDPMYIVEGRKK 276          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|1012173730|ref|XP_015966394.1| (uncharacterized protein LOC107490140 isoform X2 [Arachis duranensis])

HSP 1 Score: 296.204 bits (757), Expect = 9.902e-98
Identity = 142/222 (63.96%), Postives = 172/222 (77.48%), Query Frame = 0
Query:   52 IADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAK 269
            + ++LK+ +WPE+  F+  D+QR DESSD  FY +PRFVTHIDDPAI ALT YY+V FPP+      +LD+CSSW+SH+P G K++R VG+GMN+ EL +N  L EYVV+DLNV+P LPF D SFDV+T VVSVDYL +PL+VF E+ R+LKPGG  IMS SNRCF TKA+SIW  TGDA HV IVGAYF Y    FEPP AVDISPNPGRSDPM+IV + K
Sbjct:   35 VNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSVVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDSSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG-FEPPQAVDISPNPGRSDPMYIVYSRK 255          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|1012173726|ref|XP_015966393.1| (uncharacterized protein LOC107490140 isoform X1 [Arachis duranensis])

HSP 1 Score: 297.36 bits (760), Expect = 5.931e-97
Identity = 142/222 (63.96%), Postives = 172/222 (77.48%), Query Frame = 0
Query:   52 IADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAK 269
            + ++LK+ +WPE+  F+  D+QR DESSD  FY +PRFVTHIDDPAI ALT YY+V FPP+      +LD+CSSW+SH+P G K++R VG+GMN+ EL +N  L EYVV+DLNV+P LPF D SFDV+T VVSVDYL +PL+VF E+ R+LKPGG  IMS SNRCF TKA+SIW  TGDA HV IVGAYF Y    FEPP AVDISPNPGRSDPM+IV + K
Sbjct:  117 VNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSVVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDSSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG-FEPPQAVDISPNPGRSDPMYIVYSRK 337          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|1021520916|ref|XP_016203838.1| (uncharacterized protein LOC107644486 isoform X2 [Arachis ipaensis])

HSP 1 Score: 293.893 bits (751), Expect = 7.633e-97
Identity = 141/222 (63.51%), Postives = 171/222 (77.03%), Query Frame = 0
Query:   52 IADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAK 269
            + ++LK+ +WPE+  F+  D+QR DESSD  FY +PRFVTHIDDPAI ALT YY+  FPP+      +LD+CSSW+SH+P G K++R VG+GMN+ EL +N  L EYVV+DLNV+P LPF D SFDV+T VVSVDYL +PL+VF E+ R+LKPGG  IMS SNRCF TKA+SIW  TGDA HV IVGAYF Y    FEPP AVDISPNPGRSDPM+IV + K
Sbjct:   35 VNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG-FEPPQAVDISPNPGRSDPMYIVYSRK 255          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|449446582|ref|XP_004141050.1| (PREDICTED: uncharacterized protein LOC101203969 [Cucumis sativus] >gi|700205423|gb|KGN60542.1| hypothetical protein Csa_2G000500 [Cucumis sativus])

HSP 1 Score: 295.049 bits (754), Expect = 1.575e-96
Identity = 154/279 (55.20%), Postives = 193/279 (69.18%), Query Frame = 0
Query:    3 SLQHWSRAASCFCALPV---TAFIAPTFSQSCSDV-ASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEA 273
            SL+ WS        L +    +F AP  + S S V A S  ++ R   +    + ++LK+ +WPE+  FR  D+QR DE+ D+ FY SPRFVTHIDDPAI ALT +Y+  FPP+      +LD+CSSW+SH+P G K++R VGMGMN+ EL +N  L EY+V+DLNV+P LPF D SFDV+T VVSVDYL +PL VF E++RVLKPGG  IMS SNRCF TKA+SIW  TGDA H+ IVG+YF Y    FEPP AVDISPNPGRSDPM+IV + K   A
Sbjct:   32 SLKRWSAGGKHRRRLVLGLGISFWAPFMNMSGSLVGAKSFVASARPKNS----VEEILKNVEWPEKFPFREEDFQRFDETPDSYFYESPRFVTHIDDPAIAALTKFYSEVFPPSNTPGISMLDMCSSWVSHFPAGYKQERVVGMGMNEEELKRNTVLTEYIVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLTVFKEMSRVLKPGGLAIMSFSNRCFFTKAISIWTSTGDADHIMIVGSYFHYAGG-FEPPQAVDISPNPGRSDPMYIVYSRKLSTA 305          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|659071335|ref|XP_008459281.1| (PREDICTED: uncharacterized protein LOC103498457 [Cucumis melo])

HSP 1 Score: 294.664 bits (753), Expect = 2.002e-96
Identity = 141/226 (62.39%), Postives = 171/226 (75.66%), Query Frame = 0
Query:   52 IADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKKEA 273
            + ++LK+ +WPE+  FR  D+QR DE+ DT FY SPRFVTHIDDPAI ALT +Y+  FPP+      +LD+CSSW+SH+P G K++R VGMGMN+ EL +N  L EY+V+DLNV+P LPF D SFDV+T VVSVDYL +PL VF E+ RVLKPGG  IMS SNRCF TKA+SIW  TGDA H+ IVG+YF Y    FEPP AVDISPNPGRSDPM+IV + K   A
Sbjct:   81 VEEILKNVEWPEQFPFREEDFQRFDETPDTYFYESPRFVTHIDDPAIAALTKFYSEVFPPSNTPGVSMLDMCSSWVSHFPAGYKQERVVGMGMNEEELKRNPVLTEYIVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLTVFKEMNRVLKPGGLAIMSFSNRCFFTKAISIWTSTGDADHIMIVGSYFHYAGG-FEPPQAVDISPNPGRSDPMYIVYSRKLSTA 305          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|702292893|ref|XP_010047581.1| (PREDICTED: uncharacterized protein LOC104436494 [Eucalyptus grandis] >gi|629114855|gb|KCW79530.1| hypothetical protein EUGRSUZ_C00903 [Eucalyptus grandis])

HSP 1 Score: 294.664 bits (753), Expect = 2.384e-96
Identity = 138/223 (61.88%), Postives = 170/223 (76.23%), Query Frame = 0
Query:   51 KIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAK 269
             +  VLK+ +WPE+  F+  D+QR DESSD+ FY +PRFVTHIDDPAI ALT +Y+   PP+      +LD+CSSWISHYP G K++R VGMGMN+ EL +N  L EY+++DLNV+P LPF D SFDV+T VVSVDYL +PL+VF E++R+LKPGG  IMS SNRCF TKA+SIW  TGD  HV IVG+YF Y    FEPP AVDISPNPGRSDPM++V + K
Sbjct:   84 NVEQVLKNVEWPEQFPFKEEDFQRFDESSDSQFYEAPRFVTHIDDPAIAALTKFYSKVLPPSNSPGVSILDMCSSWISHYPAGYKQERIVGMGMNEEELKRNLVLTEYIIQDLNVNPKLPFEDNSFDVITNVVSVDYLSKPLDVFKEMSRILKPGGQAIMSFSNRCFWTKAISIWTSTGDTDHVLIVGSYFHYAGG-FEPPQAVDISPNPGRSDPMYVVYSRK 305          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|1150737258|ref|XP_020242598.1| (uncharacterized protein LOC109820813, partial [Asparagus officinalis])

HSP 1 Score: 291.967 bits (746), Expect = 2.454e-96
Identity = 141/223 (63.23%), Postives = 170/223 (76.23%), Query Frame = 0
Query:   52 IADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKK 270
            +  VLK+ +WPE+  F+  D+ R DES+DT FYS PRFVTHIDDPAI ALT YY+  FPP+      +LD+CSSWISHYP G ++ R VGMG+N+ EL +N  L EY+V+DLNV+P LPF D SFDV+T VVSVDYL +PL+VF E+ R+LKPGG  IMS SNRCF TKA+SIW  TGDA H +IVGAYF Y    FEPP AVDISPNPGRSDPM++V + KK
Sbjct:   14 VEKVLKNVEWPEKFPFKDEDFTRFDESADTMFYSEPRFVTHIDDPAIAALTKYYSKVFPPSNTPGVSLLDMCSSWISHYPPGYRQDRVVGMGLNEEELKRNPVLTEYIVQDLNVNPKLPFDDHSFDVITNVVSVDYLTKPLDVFKEMQRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHAWIVGAYFHYAGG-FEPPEAVDISPNPGRSDPMYVVYSRKK 235          
BLAST of EWM27921.1 vs. NCBI_GenBank
Match: gi|168059905|ref|XP_001781940.1| (predicted protein [Physcomitrella patens] >gi|162666586|gb|EDQ53236.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 291.967 bits (746), Expect = 2.959e-96
Identity = 138/222 (62.16%), Postives = 168/222 (75.68%), Query Frame = 0
Query:   54 DVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIVGAYFRYGSPLFEPPTAVDISPNPGRSDPMFIVQAAKKK 271
            +VLK  +WPE+  F   D+ R DES DT FY +PRFVTHIDDPAI+ALT YY+   PP+      +LD+CSSWISHYP+G K++R  G+G+N+ EL +N+ L EYVV+DLN+DPTLP+ D SFDV+T VVSVDYL +PLE+F E+ RVLKPGG   MS SNRCF TKA+SIW  TGD  HV IVG+YF Y    FEPP A+DISPNPGRSDPM+IV + K K
Sbjct:   18 EVLKKVQWPEQFPFTKEDFARYDESPDTVFYDAPRFVTHIDDPAIRALTRYYSTALPPSNTPGTAILDMCSSWISHYPKGYKQERIAGLGLNEEELKRNEVLTEYVVRDLNIDPTLPYADNSFDVITNVVSVDYLTKPLEIFKEMHRVLKPGGLAAMSFSNRCFFTKAISIWTSTGDVDHVMIVGSYFHYAGG-FEPPQALDISPNPGRSDPMYIVYSRKLK 238          
The following BLAST results are available for this feature:
BLAST of EWM27921.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553189114|ref|XP_005854934.1|0.000e+0100.00hypothetical protein NGA_0388400 [Nannochloropsis ... [more]
gi|298710415|emb|CBJ25479.1|1.073e-9861.02B1142C05.17 [Ectocarpus siliculosus][more]
gi|1012173730|ref|XP_015966394.1|9.902e-9863.96uncharacterized protein LOC107490140 isoform X2 [A... [more]
gi|1012173726|ref|XP_015966393.1|5.931e-9763.96uncharacterized protein LOC107490140 isoform X1 [A... [more]
gi|1021520916|ref|XP_016203838.1|7.633e-9763.51uncharacterized protein LOC107644486 isoform X2 [A... [more]
gi|449446582|ref|XP_004141050.1|1.575e-9655.20PREDICTED: uncharacterized protein LOC101203969 [C... [more]
gi|659071335|ref|XP_008459281.1|2.002e-9662.39PREDICTED: uncharacterized protein LOC103498457 [C... [more]
gi|702292893|ref|XP_010047581.1|2.384e-9661.88PREDICTED: uncharacterized protein LOC104436494 [E... [more]
gi|1150737258|ref|XP_020242598.1|2.454e-9663.23uncharacterized protein LOC109820813, partial [Asp... [more]
gi|168059905|ref|XP_001781940.1|2.959e-9662.16predicted protein [Physcomitrella patens] >gi|1626... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2762rna2762Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications