EWM27965.1, cds2732 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|585110306|gb|EWM27965.1| (hypothetical protein Naga_100008g116 [Nannochloropsis gaditana]) HSP 1 Score: 1424.45 bits (3686), Expect = 0.000e+0 Identity = 690/690 (100.00%), Postives = 690/690 (100.00%), Query Frame = 0
Query: 1 MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQAAACAAAKAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLRCFPTDDGATSPPSMTSPTDVATAIFRRRVPAYKTLALGNKSLNSLQEAMPLLPPLSSTIQTPLALPLAPASKVTVTSQSQDGAQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW 690
MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQAAACAAAKAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLRCFPTDDGATSPPSMTSPTDVATAIFRRRVPAYKTLALGNKSLNSLQEAMPLLPPLSSTIQTPLALPLAPASKVTVTSQSQDGAQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW
Sbjct: 1 MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQAAACAAAKAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLRCFPTDDGATSPPSMTSPTDVATAIFRRRVPAYKTLALGNKSLNSLQEAMPLLPPLSSTIQTPLALPLAPASKVTVTSQSQDGAQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW 690
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|553193138|ref|XP_005855717.1| (cell adhesion domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293339|gb|EKU20639.1| cell adhesion domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1402.88 bits (3630), Expect = 0.000e+0 Identity = 680/690 (98.55%), Postives = 683/690 (98.99%), Query Frame = 0
Query: 1 MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQAAACAAAKAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLRCFPTDDGATSPPSMTSPTDVATAIFRRRVPAYKTLALGNKSLNSLQEAMPLLPPLSSTIQTPLALPLAPASKVTVTSQSQDGAQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW 690
MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQ AACAA KAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLR FPTDDGATS PSMTSPTD+ATAIFRRRVPA+KTLALGNKSLNSLQEAMPLLPPLS TIQ PLALPLAPASKVTVTS+SQD AQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW
Sbjct: 120 MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQEAACAATKAAAATQAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLALRGLGIVFEQFQTSLIGRRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKKADLRRHQSVEICFSLLNSAGGSLGSGLNGLKSHLLPETEEEQNADPSAWAMGATSCVALSTLISGASPSSRSPPLRTSVSLSIFQRRHSAGTLSNQENPNESLRSFPTDDGATSLPSMTSPTDMATAIFRRRVPAHKTLALGNKSLNSLQEAMPLLPPLSPTIQPPLALPLAPASKVTVTSKSQDEAQVLGRQQRHEYYSHGAYEGHNKNHLRWLTASAYREVEIGDFPLMARATDAEVRELMLGNYVYKQYRGHLFLRVSRAW 809
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|585110366|gb|EWM28025.1| (hypothetical protein Naga_100008g20 [Nannochloropsis gaditana]) HSP 1 Score: 235.343 bits (599), Expect = 1.928e-65 Identity = 137/341 (40.18%), Postives = 193/341 (56.60%), Query Frame = 0
Query: 90 FFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPYRLVGHSLGTQVVVHAATLLSQRKAREEEEVRSATALAAAAASAAVAVARTGAAATMKAKMGVYASKKEKRKTVAAAKRAEAAAISTAAQAAACAAAKAAAAT-QAPLQLPTRIALLDAFATLGVKAYLSGWPIMVVVQKEVLA--LRGLGIVFEQFQTSLIG-RRGFFLRHLTAFVQLDPPGIPWYRLRSRHVAAVYMYFLSFGHAVDGPRLKK 426
+FDP KP+V+YVHG+ RT R FRE+ NW +D +GLD+NAAD W++ GWN+G+F+W+++ADE+ D E+KIW++ GMRYR++ RV + S P ++ LA +L F A YRLVGHSLG QVV+HAATLL++ K R+ +A L + V T+ K ++ + + A E + A ++ T +A LPTRIALLDAF TL K Y+ GW + V KE LA ++ +VFEQ++TSL+ F L+ TAF L+P IPW++LR+RHV A Y+YF S G R+ K
Sbjct: 157 YFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGYRLVGHSLGAQVVIHAATLLARAKRRQA----NAVCLQDGIVNCDV---------TLDEK-----TRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYV-GWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMASLEVGRRVMK 478
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|1149916691|ref|WP_077848017.1| (cell adhesion domain-containing protein [Clostridium puniceum] >gi|1149499488|gb|OOM75901.1| hypothetical protein CLPUN_29380 [Clostridium puniceum]) HSP 1 Score: 141.739 bits (356), Expect = 3.422e-33 Identity = 73/218 (33.49%), Postives = 119/218 (54.59%), Query Frame = 0
Query: 26 HDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPY-----RLVGHSLGTQVVVHAATLLSQR 238
+DG+ +D +Y++G +N EK++ S NP +FDP KPT+IY+HG+ + +T + +RE+FN + D+ YG+D+N AD W+ +GWN+GIF+WN +DE +D E+KIWT++G MR+R + Y +++ P+ S++Q L D ++ A + + RL GHSLG QVV++ L+S
Sbjct: 29 YDGNGTKLDASIYWYGKNNAAEKFVEGQS----------------------------NP-----YFDPKKPTIIYIHGWQKDSTTKLYRESFNPSTMDREYGVDVNLADYWIDKGWNVGIFYWNQFSDESEVKDAEAKIWTTSGPKSMRWRKVDG-----TYESNNVPTVSVAQ----LFVDNYKKAMSNFSGSEIRLAGHSLGGQVVINGTKLISDE 204
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|505204890|ref|WP_015391992.1| (cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum] >gi|451784703|gb|AGF55671.1| cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum N1-4(HMT)]) HSP 1 Score: 139.043 bits (349), Expect = 2.687e-32 Identity = 75/238 (31.51%), Postives = 121/238 (50.84%), Query Frame = 0
Query: 1 MLVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRG-AQAPYRLVGHSLGTQVVVHAATLLSQ 237
M V+++ ++ L +N A +D +D G+Y+FG N +K++ S+ K+FD KPTVIY+HG+ + T + +RE FN +H+D YG D++ + WV +GWNIGIF+WN +DE +D E+KIWT++G GMR+R + Y + + P+ S +Q D + + + RL GHSLG+Q+V++ L+S
Sbjct: 11 MFVMVFTVISVGLIQNGTMASAATTYDA--KTLDTGIYWFGKGNVSQKFVSGESN---------------------------------KYFDSSKPTVIYIHGWQKDKTEKLYREIFNPSHNDSSYGADVDTVNYWVDKGWNIGIFYWNQLSDESEVKDAEAKIWTTSGSKGMRWRKVDGS-----YNSINVPTVSAAQLFVDDYVKAMKNFSGSEIRLAGHSLGSQMVINGGMLISN 208
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|922998689|ref|WP_053400131.1| (cell adhesion domain-containing protein [Bacillus koreensis]) HSP 1 Score: 139.043 bits (349), Expect = 2.863e-32 Identity = 81/238 (34.03%), Postives = 119/238 (50.00%), Query Frame = 0
Query: 2 LVVIYFRLARFLSENVLQTPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRG-AQAPYRLVGHSLGTQVVVHAATLLSQR 238
L++++ L F S PA +DG +D G+Y+FG N +K++ S+S +F+ KPTVIY+HG+ TTA FRETFN +D G D+N D WV +GWN+GIF+WN ADE +D E+KIW+++G GMR+R + Y S P+ S +Q + +G + RL GHSLG+Q+V + A L+S +
Sbjct: 11 LILLFVMLPWFPS------PAAAAYDGQT--LDTGIYWFGSGNVSQKFIAGQSNS---------------------------------YFNASKPTVIYIHGWQNGTTASLFRETFNPKRNDPTNGPDVNTVDYWVAKGWNVGIFYWNQLADESEVKDAEAKIWSTSGTQGMRWR-----KKDGTYSTSGAPTVSAAQLFVNTYKQAMQGFTGSEVRLAGHSLGSQMVTNGAKLISDQ 202
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|922882902|gb|KOO48641.1| (cell adhesion domain-containing protein [Bacillus koreensis]) HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32 Identity = 77/220 (35.00%), Postives = 112/220 (50.91%), Query Frame = 0
Query: 20 TPAVHVHDGDEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRG-AQAPYRLVGHSLGTQVVVHAATLLSQR 238
+PA +DG +D G+Y+FG N +K++ S+S +F+ KPTVIY+HG+ TTA FRETFN +D G D+N D WV +GWN+GIF+WN ADE +D E+KIW+++G GMR+R + Y S P+ S +Q + +G + RL GHSLG+Q+V + A L+S +
Sbjct: 12 SPAAAAYDGQT--LDTGIYWFGSGNVSQKFIAGQSNS---------------------------------YFNASKPTVIYIHGWQNGTTASLFRETFNPKRNDPTNGPDVNTVDYWVAKGWNVGIFYWNQLADESEVKDAEAKIWSTSGTQGMRWR-----KKDGTYSTSGAPTVSAAQLFVNTYKQAMQGFTGSEVRLAGHSLGSQMVTNGAKLISDQ 191
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|1028465953|gb|ANE48876.1| (cell adhesion domain-containing protein [Paenibacillus swuensis]) HSP 1 Score: 137.117 bits (344), Expect = 1.011e-31 Identity = 66/154 (42.86%), Postives = 92/154 (59.74%), Query Frame = 0
Query: 90 FFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPY-----RLVGHSLGTQVVVHAATLLSQR 238
+++P KPT+IYVHG+ + TTA FRETFN+ H+D YG+++N AD WV GWNIGIF+WN ADE +D E+KIWT+ G MR+R + Y A +++ DL D + A + Y R+ GHSLG Q+ V L+S +
Sbjct: 47 YYNPTKPTIIYVHGWQKDTTATAFRETFNYLHNDASYGVNVNTADAWVSAGWNIGIFYWNQFADEAEVKDAEAKIWTATGPKAMRWR-----KKDGTYIAGP------TKSAGDLFYDAYASAMSNYTGSNIRIAGHSLGNQMAVRLTKLVSDK 189
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|1057236351|ref|WP_068606794.1| (cell adhesion domain-containing protein [Paenibacillus swuensis]) HSP 1 Score: 137.117 bits (344), Expect = 1.110e-31 Identity = 66/154 (42.86%), Postives = 92/154 (59.74%), Query Frame = 0
Query: 90 FFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPY-----RLVGHSLGTQVVVHAATLLSQR 238
+++P KPT+IYVHG+ + TTA FRETFN+ H+D YG+++N AD WV GWNIGIF+WN ADE +D E+KIWT+ G MR+R + Y A +++ DL D + A + Y R+ GHSLG Q+ V L+S +
Sbjct: 54 YYNPTKPTIIYVHGWQKDTTATAFRETFNYLHNDASYGVNVNTADAWVSAGWNIGIFYWNQFADEAEVKDAEAKIWTATGPKAMRWR-----KKDGTYIAGP------TKSAGDLFYDAYASAMSNYTGSNIRIAGHSLGNQMAVRLTKLVSDK 196
BLAST of EWM27965.1 vs. NCBI_GenBank
Match: gi|1149917095|ref|WP_077848421.1| (cell adhesion domain-containing protein [Clostridium puniceum] >gi|1149498833|gb|OOM75263.1| hypothetical protein CLPUN_33930 [Clostridium puniceum]) HSP 1 Score: 135.576 bits (340), Expect = 4.202e-31 Identity = 76/212 (35.85%), Postives = 114/212 (53.77%), Query Frame = 0
Query: 29 DEAPVDMGLYFFGLDNQCEKWLPSSSSSAAEDLAPTFRMSLLRGSKGKKSTIDANPKGQCKFFDPCKPTVIYVHGFSRRTTARRFRETFNWAHSDKLYGLDINAADRWVREGWNIGIFFWNNHADEEVPQDTESKIWTSNGRCGMRYRTICPQRGRVMYYASSRPSPSISQTLADLLADVFRGAQAPY-----RLVGHSLGTQVVVHAATLL 235
D +D G+Y+FG +NQ EK++ +G+K++ +FDP KPTVIY+HG+ +T + RETFN ++ L++N+AD WV+ GWNIGIF+WN ADE +D E+KIWT+ MR+R I G YA S S +A++ +V+ A + RLVGHSLG Q+V++++ L+
Sbjct: 29 DGKTLDTGIYWFGQNNQSEKYV-----------------------EGQKNS----------YFDPSKPTVIYIHGWQNGSTKKLHRETFNATSNNSGIDLNVNSADYWVKAGWNIGIFYWNQFADEGELKDAEAKIWTNETSKKMRWRKI---DGSYESYAGSEKS------VAEIFKNVYGKAMKNFTGSEIRLVGHSLGNQMVINSSKLI 198 The following BLAST results are available for this feature:
BLAST of EWM27965.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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