EWM30416.1, cds273 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|585113076|gb|EWM30416.1| (hypothetical protein Naga_100026g43 [Nannochloropsis gaditana]) HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MSLLLHLTRCAPIDCCRLVLTTPCSHPARPGRFVYSESLPDTSKKLCRMSRVDAELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFAPVEESDAFRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNSKNL 337
MSLLLHLTRCAPIDCCRLVLTTPCSHPARPGRFVYSESLPDTSKKLCRMSRVDAELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFAPVEESDAFRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNSKNL
Sbjct: 1 MSLLLHLTRCAPIDCCRLVLTTPCSHPARPGRFVYSESLPDTSKKLCRMSRVDAELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFAPVEESDAFRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNSKNL 337
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|219115898|ref|XP_002178744.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409511|gb|EEC49442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 162.155 bits (409), Expect = 9.793e-44 Identity = 110/317 (34.70%), Postives = 172/317 (54.26%), Query Frame = 0
Query: 50 SRVDAELETLLGVLDDIQRAVGGKVKKITKEG-----------------GKVDKFMDLKQTMIARMIDVQELIASTKS--QTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFAPVEESDA-----------FRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNSKN 336
SR D EL LL L IQ +G K K E K KF+DLK T++ R+ + L+ +TK Q KD+I A +REH+RQ ++ KE+D +++KE K+KSKF+PEELE++ ++V ++ +EI ++KE+ + GY R + AV L +D+ MT++ + Q+ Q+++RD D D Q LD+I +G+ DL +IA E +K +VML+ + K+ V + + VN KMK TLD+VGR +DKLC+D++C+V+++G V+YN+ N N
Sbjct: 6 SRQDDELTELLTKLYTIQEEIGAKPKSSEDEKRAKAENVAVMGQGKKAQAKGSKFLDLKSTILDRLKTIHGLLKATKEKEQAGFGGDNAKDIIKMQANVREHLRQATDEWKEMDEIYKKEARKKKSKFTPEELEVQSELVRRLYAEIDKVKEVQMRGYTRSR-QPDAAVSLNTKALYTDSASSSRKGGSKSASWAGTGGGGGVAMTDNQRQQMLQLEERDADFDKQ-LDEIGEGILDLAEIAALQGEEVKRQSVMLDGVNNKMDKVGERMTSVNSKMKETLDEVGRSADKLCVDIMCVVLMVGFAAVIYNMVSNDSN 320
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|224014686|ref|XP_002297005.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968385|gb|EED86733.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 162.54 bits (410), Expect = 2.055e-43 Identity = 109/297 (36.70%), Postives = 165/297 (55.56%), Query Frame = 0
Query: 65 DIQRAVGGKVKKI-------TKEGGKV------------DKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN--------TPGAVGLFAPVEESDAFRGPIGML---PMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLG 331
DIQ VG K K ++ G+V +F++LK ++ R+ V LI + Q++ + PK+ IA A+IRE IRQ ++ EL+ L++KE K+KSKF+ EELE++ +V Q+ EI+++KE L GY + N GA+ V+ S G P T +T S Q+QLQQI+ RD + D Q LDQI +G++DL ++A R E ++ NVML + KI +H+ VN KMK+TL++VGR SDKLC+D++CI++ +G V Y +
Sbjct: 71 DIQEQVGAKEKSSKEDKLSRAQQAGQVVMGKGKKGQKKGSRFLELKSNIVDRLKSVHSLI---EEQSNSKRNNPKEAIAAQAEIRELIRQASDEWSELNELYKKEARKKKSKFTSEELELQQALVMQLNVEIEKVKEAQLQGYANRSGNGMDEGVRLNLGALAALDAVDISSGGEGNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEFD-QDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFYKMA 363
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|397614938|gb|EJK63107.1| (hypothetical protein THAOC_16253 [Thalassiosira oceanica]) HSP 1 Score: 154.066 bits (388), Expect = 1.206e-40 Identity = 110/319 (34.48%), Postives = 166/319 (52.04%), Query Frame = 0
Query: 55 ELETLLGVLDDIQRAVGGKVKKITKE-------GGKVD------------KFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIR----------------------KKNNTPGAVGLFAPVEESDAFRGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGK 332
EL LL L IQ VG K K E G + +F++LK ++A + +V LI + Q++ + PKD I A+IRE IRQ ++ EL+ +++KE K+KSKF+ EELE++ +V Q+ EI ++K+ GY R +N P G A++ G T +T + Q+QLQ IQ RD + D LD+I G++DL ++ALR E ++ N ML+ EQ++ Q+H+ VN KMK+TL++VGR SDKLC+D++CIV+++G V Y L K
Sbjct: 8 ELNNLLTKLYTIQEQVGAKEKTTDDEKKQRAADAGHISMGKGRKGQKKGSRFLELKSNIVAGLKNVHSLI---EQQSNAVSLNPKDSITAQAEIREVIRQASDEWNELNEIYKKEARKKKSKFTEEELEVQQALVMQLKQEIDKVKDAQQGGYARGGATLQNSQLNLGALAALDAADLSSNDPSGGGR--------AWQSGTGG----TALTGNQQVQLQAIQDRDAEFDKD-LDEIGDGIQDLHELALRQGEEVRRQNEMLKGTEQRMDQAQEHMTNVNAKMKDTLNEVGRSSDKLCVDIMCIVMMMGFAAVFYQLSK 310
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|1072224768|gb|OEU09517.1| (hypothetical protein FRACYDRAFT_173608 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 129.798 bits (325), Expect = 1.580e-31 Identity = 98/308 (31.82%), Postives = 170/308 (55.19%), Query Frame = 0
Query: 50 SRVDAELETLLGVLDDIQRAVGGKVK-----------KITKEGG------KVDKFMDLKQTMIARMIDVQELIASTKS-QTSGQE-MQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTP-GAVGLFAPVEESDAFRGPIGMLPMQT------DMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLG 331
+R D E+ LL L IQ +G K K ++K G K KF++LK ++ R+ + +L+ TK+ + +G KD+I A+ RE +RQ ++ +EL+ +++KE K+KSKF+PEELE++ ++V ++ +EI+++K+ + GY R + P A L D G G P + +T + Q+ Q+++RD D D Q LD+I +G+ DL +IA + E ++ + ML+ +++K+ + + VN +MK TL++VGR DK+ ID++CIV+ +G V+Y
Sbjct: 5 NREDEEITDLLTKLYSIQEDIGAKPKTSENEKREKAENVSKMGTTKKSEKKGSKFLELKSKIVDRLRSIHQLLKDTKALEGAGYGGNNAKDIIKMQAETREQVRQATDEWRELEAIYKKEARKKKSKFTPEELEVQSELVKRLYAEIEKVKDAQMKGYARSR--VPDAATALNTKALSYDPSAGKSGGKPSWSGTGGGTALTGDQKQQMLQLEERDADFDLQ-LDEIGEGILDLAEIAQQQGEEVRLQSQMLDQVDKKLDKNLERMTTVNSRMKETLEEVGRAGDKVMIDIMCIVLAIGFGAVIYKFA 309
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|669165842|ref|XP_008618483.1| (hypothetical protein SDRG_14152 [Saprolegnia diclina VS20] >gi|530729816|gb|EQC28058.1| hypothetical protein SDRG_14152 [Saprolegnia diclina VS20]) HSP 1 Score: 124.405 bits (311), Expect = 2.173e-29 Identity = 93/304 (30.59%), Postives = 157/304 (51.64%), Query Frame = 0
Query: 55 ELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQ-PKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN--TPGA------VGLFA-----PVEESDAF--------------RGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNL 330
E++ LL L I +GG+ + + D+F +L+ + R+ ++ + TS ++ Q P++ I +R+ IR ++ED E+ ++ E K+KSKFSPEEL +R V Q SE+ +KE + + Y++ +PG LF E F G G + ++T H+ + QI+Q+D+ +D ++QI GV +L +A NE ++ N+ML+ LE++I Q ++ +N KMK TL+QVGR DK +D +C+VILLG++ V+YN+
Sbjct: 5 EVDALLEKLAHINVEMGGQETRKDR-AKAADRFGELRIKISDRLHGLKITLTEMAQPTSAKKPQHPREKIKQQQGVRDDIRLVEEDLAEMAECYETEMKKKKSKFSPEELAIRKDFVDQYTSELAFIKEQASSAYVKASPGLRSPGGGLGFDRAALFGIPSATTTTEFAGFADRTGSGGTGVHNASGGGGPSYHEEEVTSEHRDIMLQIEQKDQHIDG-MVEQIGTGVMELGVLARGLNEELQKQNMMLDGLEERIDNTQATVENLNLKMKKTLEQVGRSGDKCMMDFICLVILLGILAVVYNM 306
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|299470547|emb|CBN78535.1| (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 123.25 bits (308), Expect = 2.803e-29 Identity = 91/295 (30.85%), Postives = 160/295 (54.24%), Query Frame = 0
Query: 52 VDAELETLLGVLDDIQRAVGGK-----VKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFA-PVEE---SDAFRG---PIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334
D E++ LL L IQ AVGG +++ ++ + D+F +K +I R+ D +L+A + P VI ++ ++R L+E+ K+LD +Q E++KR+SK + EELE + +++ + EI ELK + AG + K A P E +A G + P +T +++QQI+ R K+++ +YL +E+ V+ L ++A E ++ + M+++L +I Q+H+ VN +MK L V R +DK C+D++CI++LLGMI V+Y + K +
Sbjct: 5 TDREVDLLLSKLRKIQAAVGGSDEERALRRKKRKSKEDDRFNAVKSAIIKRLGDTCDLLAKEPASKD-----PTAVIQKKNAVQSNLRALEENWKQLDSAYQAEKSKRRSKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGTTSVAEAPPPGKLTSEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNMRMKEVLKNV-RSADKFCMDIMCILLLLGMIAVLYAVVKET 293
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|1173945257|gb|OQR93910.1| (hypothetical protein ACHHYP_02102 [Achlya hypogyna]) HSP 1 Score: 119.398 bits (298), Expect = 1.491e-27 Identity = 100/308 (32.47%), Postives = 163/308 (52.92%), Query Frame = 0
Query: 49 MSRVDAELETLLGVLDDIQRAVGGKVKKITKEGGKV-DKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQ-PKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN--TPGA-VGL-------------------FAPVEESDAFRGPIGMLP--MQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNL 330
MSR E++ LL L I +GG+ ++ K+ K D+F +L+ + R+ ++ +A S ++ Q P++ I IR+ IR ++ED E+ ++ E K+KSKFSPEEL +R + Q +E+ +KE + Y++ + +PGA +G FA S G P + ++T H+ + QI+Q+D+ LD +DQI GV +L +A NE + N+ML+ LE++I Q ++ +N KMK TL QVGR DK +D +C+VILLG++ V+YN+
Sbjct: 1 MSR---EVDGLLERLAHINVEMGGQ--EVRKDKAKATDRFGELRLKISDRLHALKITLAEMAQPVSAKKPQHPREKIKQQQGIRDDIRLVEEDLTEMTECYEAEAKKKKSKFSPEELAIRKDFLDQYTAELAFIKEQASNAYVKTNPSLRSPGAGLGFDRAALFGIPTATTATEFAGFADRTGSGGVHNASGGGPSYQEEEVTSEHRDIMLQIEQKDQQLDG-MVDQIGTGVMELGVLARGLNEELVKQNIMLDGLEERIDNTQATVENLNMKMKKTLAQVGRSGDKCMMDFICLVILLGILAVVYNM 302
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|813176499|ref|XP_012205039.1| (hypothetical protein SPRG_09904 [Saprolegnia parasitica CBS 223.65] >gi|641530126|gb|KDO24268.1| hypothetical protein SPRG_09904 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.398 bits (298), Expect = 1.579e-27 Identity = 91/303 (30.03%), Postives = 151/303 (49.83%), Query Frame = 0
Query: 55 ELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQ-PKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN--TPGA------VGLFA----------------PVEESDAFRGPIGMLP--MQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNL 330
E++ LL L I +GG+ + + D+F +L+ + R+ ++ + S ++ Q P++ I +R+ IR ++ED E+ ++ E K+KSKFSPEEL +R V Q SE+ +KE + + Y++ PG LF S G P + ++T H+ + QI+Q+D+ +D ++QI GV +L +A NE ++ N+ML LE++I Q ++ +N KMK TL QVGR DK +D +C+VILLG++ V YN+
Sbjct: 5 EVDALLEKLAHINVEMGGQETRKDR-AKAADRFGELRIKISDRLHGLKISLTEMAQPISAKKPQHPREKIKQQQGVRDDIRLVEEDLAEMAECYEAETKKKKSKFSPEELAIRKDFVDQYTSELAFIKEQASSAYVKASPGLRAPGGGLGFDRAALFGIPSATTTTEFAGFADRTASGSAGVHNASGGGPSYQEEEVTSEHRDIMLQIEQKDQHIDG-MVEQIGTGVMELGVLARGLNEELQKQNMMLTGLEERIDNTQATVENLNLKMKKTLAQVGRSGDKCMMDFICLVILLGILAVAYNM 305
BLAST of EWM30416.1 vs. NCBI_GenBank
Match: gi|325184915|emb|CCA19407.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 115.161 bits (287), Expect = 3.813e-26 Identity = 93/302 (30.79%), Postives = 163/302 (53.97%), Query Frame = 0
Query: 55 ELETLLGVLDDIQRAVGGKVKKITKEGGKVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRK--------KNNTPGAVGLFAPVEESDAF------------------RGPIGMLPMQTDMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNL 330
++++LL L I +GG K K G D+F +LK + R+ ++ + ++ QT + P++VI +IRE IR + ED EL ++E K+KSKF+P EL MR + + Q SE+ +++++ Y R ++ P A+G F E+ AF + G+ + ++T+ Q LQQI+ D+ D Q +DQI GV++L +A NE ++ ++M++ L+++I Q H++ VN+KMK TL+ R DK +D++C+++LLG++ V+YN+
Sbjct: 5 DIDSLLEKLTKINAEMGGDESKKKKGKGTSDRFEELKTKIGDRLHRLKSNLQESEPQTR-RNKHPREVIRRQQEIREDIRTVTEDIHELKMSHEQEAKKKKSKFTPAELSMRKEYIEQYTSELVIIRDMAAQTYARSNAMAAGYGEDGVPSALGTF----ENGAFFAKHQTAADYVLSGGGDGKEVTGVTRLAEEVTDDQQSTLQQIKNNDQRFD-QIIDQIGTGVQELGQLARGLNEELQQQSIMIDGLDERIDTTQAHVESVNQKMKKTLETFARSPDKCMMDMICLILLLGILTVVYNM 300 The following BLAST results are available for this feature:
BLAST of EWM30416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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