EWM28017.1, cds2714 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|585110358|gb|EWM28017.1| (rhamnose biosynthetic enzyme expressed [Nannochloropsis gaditana]) HSP 1 Score: 842.032 bits (2174), Expect = 0.000e+0 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query: 1 MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403
MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS
Sbjct: 1 MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|553187699|ref|XP_005854661.1| (dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526] >gi|422294395|gb|EKU21695.1| dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 746.888 bits (1927), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query: 46 MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403
MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS
Sbjct: 1 MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 358
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|676384021|ref|XP_009035289.1| (hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens] >gi|323454628|gb|EGB10498.1| hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens]) HSP 1 Score: 510.76 bits (1314), Expect = 4.234e-179 Identity = 237/329 (72.04%), Postives = 279/329 (84.80%), Query Frame = 0
Query: 68 VTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGA-ADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
VTGGAGFIASHVV+LL KK IVN DRLDYC+C+ENL+E+ NYKFVKG+ICS+DLVN+VLE EE+DTIMHFAAQTHVDNSFGNSF FT+NNI+GTHVLLE+AKVH+IKRF+HVSTDEVYGEG + EPM ED VLEPTNPYAATKA AEF+ KSY RSF LP+IITRGNNVYGPHQ+PEKLIPKFVN L R RPVTLHG G NTRNFLYVEDVARAF+ ILH+ GKIYNIGG +E++N+ VAK+LIR+MG E ++ FV DRAFNDLRYT+++ L +LGW+E++SWE+GL TVEWY++++ RY +I+ ALVAHPR
Sbjct: 1 VTGGAGFIASHVVILLAKKRGPGVIVNFDRLDYCACIENLNEVAKLPNYKFVKGDICSADLVNFVLETEEVDTIMHFAAQTHVDNSFGNSFQFTRNNIMGTHVLLEAAKVHSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAVGKIYNIGGCNERSNLSVAKELIRIMGLSDNESSLITFVPDRAFNDLRYTIDNSELAKLGWKELMSWEEGLATTVEWYRKYSNRYKDIERALVAHPR 329
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1210517877|dbj|GAX23278.1| (dTDP-glucose 4,6-dehydratase [Fistulifera solaris]) HSP 1 Score: 496.893 bits (1278), Expect = 3.559e-173 Identity = 231/344 (67.15%), Postives = 283/344 (82.27%), Query Frame = 0
Query: 54 GSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKV-HNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
+A +Y P+NI++TGGAGFIASHV +LL KK+P+YKIV D LDYC+CL NL E+ N+KFVKG+I S DLV+YVL+EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK IKRF+HVSTDEVYGEG D +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L+RD P+T+HG+G NTRNFLYV DVA AF+ I+H+G G +YNIGG +E ANI+VA+ L++L G E++++ FV DR FNDLRYT+NS L +LGW+E+++WE+GL TV+WYKQ++ RYGNID ALVAHPR
Sbjct: 4 AAAASEDYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANIDVARALLKLFGKEDREQELITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWYKQYSHRYGNIDAALVAHPR 347
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|224002825|ref|XP_002291084.1| (dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220972860|gb|EED91191.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 496.508 bits (1277), Expect = 5.282e-173 Identity = 234/342 (68.42%), Postives = 283/342 (82.75%), Query Frame = 0
Query: 58 EAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-NIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSG 397
E +Y PKNIL+TGGAGFI SHV +LL KK+P Y IV D+LDYCSCL NLDE+ KN+KFVKG+I S DLV+YV+ EE+IDT+MHFAAQTHVDNSFGNSF+FTQ+NI GTHV+LE+AK H +KRFIHVSTDEVYGEG + E M E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N ++R RPVTLHG+G NTRNFLYVEDVARAFEV++H+ G IYNIGG +E +N+EVAK LI ++G G + ++++ FV DR FNDLRYT+NS L +LGW+E ++WE+GL TVEWY +++ R+GNI+ ALVAHPR G
Sbjct: 8 ENDYIPKNILLTGGAGFIGSHVAILLAKKYPHYNIVVYDKLDYCSCLANLDEVSRLKNFKFVKGDITSPDLVSYVMVEEDIDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVMLEAAKCHRGMKRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQILRGRPVTLHGDGSNTRNFLYVEDVARAFEVLVHKASPGMIYNIGGDNEISNLEVAKKLIEILGKGDQMDELITFVPDRKFNDLRYTINSGKLHKLGWKEEMNWEEGLRTTVEWYTKYSDRFGNIEDALVAHPRIG 349
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1210514462|dbj|GAX26571.1| (dTDP-glucose 4,6-dehydratase [Fistulifera solaris]) HSP 1 Score: 495.738 bits (1275), Expect = 9.841e-173 Identity = 230/344 (66.86%), Postives = 283/344 (82.27%), Query Frame = 0
Query: 54 GSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKV-HNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
+A +Y P+NI++TGGAGFIASHV +LL KK+P+YKIV D LDYC+CL NL E+ N+KFVKG+I S DLV+YVL+EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK IKRF+HVSTDEVYGEG D +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L+RD P+T+HG+G NTRNFLYV DVA AF+ I+H+G G +YNIGG +E AN++VA+ L++L G E++++ FV DR FNDLRYT+NS L +LGW+E+++WE+GL TV+WYKQ++ RYGNID ALVAHPR
Sbjct: 4 AAAASEDYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANLDVARALLKLFGKEDREQELITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWYKQYSHRYGNIDAALVAHPR 347
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|219121781|ref|XP_002181238.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407224|gb|EEC47161.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 498.434 bits (1282), Expect = 1.029e-172 Identity = 237/360 (65.83%), Postives = 289/360 (80.28%), Query Frame = 0
Query: 39 HPCISFI-MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHN-IKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
HP F M N +AP +YTP+NILVTGGAGFIASHV +LL KK+P+YKIV D LDYC+CL NL E+ N+KFVKG+I S DLV+YVL EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK + ++RF+HVSTDEVYGEG + +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N L+++ P+T+HG+G NTRNFLYV DVA AF++I+H+G G +YNIGG +E N+EVA+ L++L KEE+ +++FV DR FNDLRYT+NS L +LGW E++SWE+GL TV+WYK++T RYGNID ALVAHPR
Sbjct: 55 HPLRKFCTMVETNGTKPTAPVEDYTPENILVTGGAGFIASHVAILLCKKYPQYKIVVYDCLDYCACLANLQELFDLPNFKFVKGDIASPDLVSYVLREEKIDTILHFAAQTHVDNSFGNSFAFTQTNIYGTHVLLESAKCCDTLRRFVHVSTDEVYGEGEDFETDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFQLPCLITRGNNVYGPHQFPEKLIPKFTNQLLKNLPLTIHGDGSNTRNFLYVTDVANAFDIIMHKGTPGHVYNIGGKNEVPNLEVARALLKLFDKEKEEDTLIKFVPDRRFNDLRYTINSNKLHELGWTELMSWEEGLATTVDWYKKYTSRYGNIDAALVAHPR 414
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|397571503|gb|EJK47833.1| (hypothetical protein THAOC_33424 [Thalassiosira oceanica]) HSP 1 Score: 494.967 bits (1273), Expect = 2.146e-172 Identity = 237/351 (67.52%), Postives = 283/351 (80.63%), Query Frame = 0
Query: 58 EAEYTPKNILVTGGAG---------FIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-NIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSG 397
E +Y P+NIL+TGGAG FI SH +LL KK+P+Y ++ D+LDYCSCL NLDEI KN+KFVKG+ICS DLV+YV+ EE++DT+MHFAAQTHVDNSFGNSF+FTQ+NI GTHVLLESAK H I+RFIHVSTDEVYGEG + E M E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N L+R R VTLHG+G NTRNFLYVEDVARAFEVILH+ G+I NIGG +E +N++VAK LI ++G +EE+++ FV DR FNDLRYT+NS L +LGW+E +SWEDGL TVEWY ++T R+GNI+ ALVAHPR G
Sbjct: 10 ENDYIPRNILLTGGAGPLIIAETLGFIGSHAAILLAKKYPQYNVIVYDKLDYCSCLANLDEISRLKNFKFVKGDICSPDLVSYVMREEDVDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVLLESAKNHKTIRRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQLLRGRQVTLHGDGSNTRNFLYVEDVARAFEVILHKASPGQILNIGGENEISNLDVAKTLIDILGMKDKEEELISFVPDRKFNDLRYTINSGKLHELGWKEEMSWEDGLKTTVEWYTKYTSRFGNIEDALVAHPRIG 360
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|299469656|emb|CBN76510.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 487.649 bits (1254), Expect = 3.087e-169 Identity = 234/328 (71.34%), Postives = 269/328 (82.01%), Query Frame = 0
Query: 49 GNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEE-EKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEW 375
G A A YTP+NIL+TGGAGFIASH+V+LLV+K+P+Y IV DRLDYC+CLENLD I NYKFVKGNICSSD+V YVL EE+IDTI+HFAAQTHVDNSFGNSF FTQNNI GTHVLLESAK IKRF+HVSTDEVYGEG DQEPMFED VLEPTNPYAATKAGAEFIAK+Y RSFNLP+IITRGNNVYGPHQYPEKLIPKF+N LMR + +T+HG G N RNFL+V DVA AFE ILH GV G IYNIGGT+E + ++VA+DL+R+ E+ +K +F +DR FNDLRYT+NS+ L LGW+E +WE GL +TVEW
Sbjct: 9 GGASTPDAVAAHYTPQNILITGGAGFIASHLVILLVEKYPQYNIVVFDRLDYCACLENLDCIAQKPNYKFVKGNICSSDMVTYVLREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAGVEGSIYNIGGTNEHSVLKVARDLMRIFELPSEDGDKATEFGDDRVFNDLRYTINSDKLAALGWKEEKTWEQGLKETVEW 336
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1072231043|gb|OEU15776.1| (putative dTDP-glucose 4,6-dehydratase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 479.559 bits (1233), Expect = 2.155e-166 Identity = 228/340 (67.06%), Postives = 273/340 (80.29%), Query Frame = 0
Query: 58 EAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAK-VHNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
+A Y PKNI +TGGAGFI SHV + L KK+P+Y IV DRLDYCSCLENL E+K KN+KF+KG+I ++DLV Y L EE IDTIMHFAAQTHVDNSFGNS +FTQ+NI GTHVLLE AK IKRFIHVSTDEVYGEG + +PM E+ +LEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N LM + +TLHG+G NTRNFLYV DVA AFE ILH+G+ G +YNIGG +E +N++VAK L+++ G +E++ + +V DR FNDLRYT+NS L +LGW E +SWE+GL TV+WYK+ T RYGNI+ ALVAHPR
Sbjct: 6 DAHYVPKNIFLTGGAGFIGSHVAIKLCKKYPEYNIVVYDRLDYCSCLENLGELKGLKNFKFIKGDIATADLVTYALLEENIDTIMHFAAQTHVDNSFGNSLAFTQSNIYGTHVLLECAKNCPTIKRFIHVSTDEVYGEGEDFETDPMTEEHILEPTNPYAATKAGAEFLVKSYFRSFKLPCLITRGNNVYGPHQFPEKLIPKFTNQLMSGKKLTLHGDGTNTRNFLYVTDVAAAFETILHKGLPGHVYNIGGDNEVSNVKVAKTLLKIFGLEDKEDEYITYVPDRQFNDLRYTINSSKLHELGWTEEMSWEEGLKTTVDWYKEFTSRYGNIENALVAHPR 345 The following BLAST results are available for this feature:
BLAST of EWM28017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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