EWM28017.1, cds2714 (CDS) Nannochloropsis gaditana

Overview
NameEWM28017.1
Unique Namecds2714
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1045926..1046149 +
Alignment locationCM002459.1:1046229..1046280 +
Alignment locationCM002459.1:1046505..1046855 +
Alignment locationCM002459.1:1047009..1047227 +
Alignment locationCM002459.1:1047320..1047503 +
Alignment locationCM002459.1:1047651..1047832 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28017.1
Productrhamnose biosynthetic enzyme expressed
Orig transcript idgnl|cribi|Naga_100008g94.7909.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1045926..1046149 +
CM002459.1supercontigCM002459.1:1046229..1046280 +
CM002459.1supercontigCM002459.1:1046505..1046855 +
CM002459.1supercontigCM002459.1:1047009..1047227 +
CM002459.1supercontigCM002459.1:1047320..1047503 +
CM002459.1supercontigCM002459.1:1047651..1047832 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009225nucleotide-sugar metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0008460dTDP-glucose 4,6-dehydratase activity
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005888dTDP_Gluc_deHydtase
IPR016040NAD(P)-bd_dom
IPR001509Epimerase_deHydtase_N
Homology
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|585110358|gb|EWM28017.1| (rhamnose biosynthetic enzyme expressed [Nannochloropsis gaditana])

HSP 1 Score: 842.032 bits (2174), Expect = 0.000e+0
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query:    1 MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403
            MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS
Sbjct:    1 MVSYLNSLWAFASTVSNPILSMSHHAHTHLHTHIQLRHHPCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|553187699|ref|XP_005854661.1| (dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526] >gi|422294395|gb|EKU21695.1| dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 746.888 bits (1927), Expect = 0.000e+0
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query:   46 MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 403
            MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS
Sbjct:    1 MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSGAVHEFS 358          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|676384021|ref|XP_009035289.1| (hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens] >gi|323454628|gb|EGB10498.1| hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens])

HSP 1 Score: 510.76 bits (1314), Expect = 4.234e-179
Identity = 237/329 (72.04%), Postives = 279/329 (84.80%), Query Frame = 0
Query:   68 VTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGA-ADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
            VTGGAGFIASHVV+LL KK     IVN DRLDYC+C+ENL+E+    NYKFVKG+ICS+DLVN+VLE EE+DTIMHFAAQTHVDNSFGNSF FT+NNI+GTHVLLE+AKVH+IKRF+HVSTDEVYGEG   + EPM ED VLEPTNPYAATKA AEF+ KSY RSF LP+IITRGNNVYGPHQ+PEKLIPKFVN L R RPVTLHG G NTRNFLYVEDVARAF+ ILH+   GKIYNIGG +E++N+ VAK+LIR+MG    E  ++ FV DRAFNDLRYT+++  L +LGW+E++SWE+GL  TVEWY++++ RY +I+ ALVAHPR
Sbjct:    1 VTGGAGFIASHVVILLAKKRGPGVIVNFDRLDYCACIENLNEVAKLPNYKFVKGDICSADLVNFVLETEEVDTIMHFAAQTHVDNSFGNSFQFTRNNIMGTHVLLEAAKVHSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAVGKIYNIGGCNERSNLSVAKELIRIMGLSDNESSLITFVPDRAFNDLRYTIDNSELAKLGWKELMSWEEGLATTVEWYRKYSNRYKDIERALVAHPR 329          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1210517877|dbj|GAX23278.1| (dTDP-glucose 4,6-dehydratase [Fistulifera solaris])

HSP 1 Score: 496.893 bits (1278), Expect = 3.559e-173
Identity = 231/344 (67.15%), Postives = 283/344 (82.27%), Query Frame = 0
Query:   54 GSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKV-HNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
             +A   +Y P+NI++TGGAGFIASHV +LL KK+P+YKIV  D LDYC+CL NL E+    N+KFVKG+I S DLV+YVL+EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK    IKRF+HVSTDEVYGEG   D +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L+RD P+T+HG+G NTRNFLYV DVA AF+ I+H+G  G +YNIGG +E ANI+VA+ L++L G    E++++ FV DR FNDLRYT+NS  L +LGW+E+++WE+GL  TV+WYKQ++ RYGNID ALVAHPR
Sbjct:    4 AAAASEDYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANIDVARALLKLFGKEDREQELITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWYKQYSHRYGNIDAALVAHPR 347          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|224002825|ref|XP_002291084.1| (dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220972860|gb|EED91191.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 496.508 bits (1277), Expect = 5.282e-173
Identity = 234/342 (68.42%), Postives = 283/342 (82.75%), Query Frame = 0
Query:   58 EAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-NIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSG 397
            E +Y PKNIL+TGGAGFI SHV +LL KK+P Y IV  D+LDYCSCL NLDE+   KN+KFVKG+I S DLV+YV+ EE+IDT+MHFAAQTHVDNSFGNSF+FTQ+NI GTHV+LE+AK H  +KRFIHVSTDEVYGEG   + E M E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N ++R RPVTLHG+G NTRNFLYVEDVARAFEV++H+   G IYNIGG +E +N+EVAK LI ++G G + ++++ FV DR FNDLRYT+NS  L +LGW+E ++WE+GL  TVEWY +++ R+GNI+ ALVAHPR G
Sbjct:    8 ENDYIPKNILLTGGAGFIGSHVAILLAKKYPHYNIVVYDKLDYCSCLANLDEVSRLKNFKFVKGDITSPDLVSYVMVEEDIDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVMLEAAKCHRGMKRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQILRGRPVTLHGDGSNTRNFLYVEDVARAFEVLVHKASPGMIYNIGGDNEISNLEVAKKLIEILGKGDQMDELITFVPDRKFNDLRYTINSGKLHKLGWKEEMNWEEGLRTTVEWYTKYSDRFGNIEDALVAHPRIG 349          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1210514462|dbj|GAX26571.1| (dTDP-glucose 4,6-dehydratase [Fistulifera solaris])

HSP 1 Score: 495.738 bits (1275), Expect = 9.841e-173
Identity = 230/344 (66.86%), Postives = 283/344 (82.27%), Query Frame = 0
Query:   54 GSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKV-HNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
             +A   +Y P+NI++TGGAGFIASHV +LL KK+P+YKIV  D LDYC+CL NL E+    N+KFVKG+I S DLV+YVL+EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK    IKRF+HVSTDEVYGEG   D +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L+RD P+T+HG+G NTRNFLYV DVA AF+ I+H+G  G +YNIGG +E AN++VA+ L++L G    E++++ FV DR FNDLRYT+NS  L +LGW+E+++WE+GL  TV+WYKQ++ RYGNID ALVAHPR
Sbjct:    4 AAAASEDYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANLDVARALLKLFGKEDREQELITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWYKQYSHRYGNIDAALVAHPR 347          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|219121781|ref|XP_002181238.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407224|gb|EEC47161.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 498.434 bits (1282), Expect = 1.029e-172
Identity = 237/360 (65.83%), Postives = 289/360 (80.28%), Query Frame = 0
Query:   39 HPCISFI-MSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHN-IKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
            HP   F  M   N    +AP  +YTP+NILVTGGAGFIASHV +LL KK+P+YKIV  D LDYC+CL NL E+    N+KFVKG+I S DLV+YVL EE+IDTI+HFAAQTHVDNSFGNSF+FTQ NI GTHVLLESAK  + ++RF+HVSTDEVYGEG   + +PM E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N L+++ P+T+HG+G NTRNFLYV DVA AF++I+H+G  G +YNIGG +E  N+EVA+ L++L    KEE+ +++FV DR FNDLRYT+NS  L +LGW E++SWE+GL  TV+WYK++T RYGNID ALVAHPR
Sbjct:   55 HPLRKFCTMVETNGTKPTAPVEDYTPENILVTGGAGFIASHVAILLCKKYPQYKIVVYDCLDYCACLANLQELFDLPNFKFVKGDIASPDLVSYVLREEKIDTILHFAAQTHVDNSFGNSFAFTQTNIYGTHVLLESAKCCDTLRRFVHVSTDEVYGEGEDFETDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFQLPCLITRGNNVYGPHQFPEKLIPKFTNQLLKNLPLTIHGDGSNTRNFLYVTDVANAFDIIMHKGTPGHVYNIGGKNEVPNLEVARALLKLFDKEKEEDTLIKFVPDRRFNDLRYTINSNKLHELGWTELMSWEEGLATTVDWYKKYTSRYGNIDAALVAHPR 414          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|397571503|gb|EJK47833.1| (hypothetical protein THAOC_33424 [Thalassiosira oceanica])

HSP 1 Score: 494.967 bits (1273), Expect = 2.146e-172
Identity = 237/351 (67.52%), Postives = 283/351 (80.63%), Query Frame = 0
Query:   58 EAEYTPKNILVTGGAG---------FIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-NIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPRSG 397
            E +Y P+NIL+TGGAG         FI SH  +LL KK+P+Y ++  D+LDYCSCL NLDEI   KN+KFVKG+ICS DLV+YV+ EE++DT+MHFAAQTHVDNSFGNSF+FTQ+NI GTHVLLESAK H  I+RFIHVSTDEVYGEG   + E M E+ VLEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N L+R R VTLHG+G NTRNFLYVEDVARAFEVILH+   G+I NIGG +E +N++VAK LI ++G   +EE+++ FV DR FNDLRYT+NS  L +LGW+E +SWEDGL  TVEWY ++T R+GNI+ ALVAHPR G
Sbjct:   10 ENDYIPRNILLTGGAGPLIIAETLGFIGSHAAILLAKKYPQYNVIVYDKLDYCSCLANLDEISRLKNFKFVKGDICSPDLVSYVMREEDVDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVLLESAKNHKTIRRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQLLRGRQVTLHGDGSNTRNFLYVEDVARAFEVILHKASPGQILNIGGENEISNLDVAKTLIDILGMKDKEEELISFVPDRKFNDLRYTINSGKLHELGWKEEMSWEDGLKTTVEWYTKYTSRFGNIEDALVAHPRIG 360          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|299469656|emb|CBN76510.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 487.649 bits (1254), Expect = 3.087e-169
Identity = 234/328 (71.34%), Postives = 269/328 (82.01%), Query Frame = 0
Query:   49 GNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEE-EKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEW 375
            G      A  A YTP+NIL+TGGAGFIASH+V+LLV+K+P+Y IV  DRLDYC+CLENLD I    NYKFVKGNICSSD+V YVL EE+IDTI+HFAAQTHVDNSFGNSF FTQNNI GTHVLLESAK   IKRF+HVSTDEVYGEG  DQEPMFED VLEPTNPYAATKAGAEFIAK+Y RSFNLP+IITRGNNVYGPHQYPEKLIPKF+N LMR + +T+HG G N RNFL+V DVA AFE ILH GV G IYNIGGT+E + ++VA+DL+R+     E+ +K  +F +DR FNDLRYT+NS+ L  LGW+E  +WE GL +TVEW
Sbjct:    9 GGASTPDAVAAHYTPQNILITGGAGFIASHLVILLVEKYPQYNIVVFDRLDYCACLENLDCIAQKPNYKFVKGNICSSDMVTYVLREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAGVEGSIYNIGGTNEHSVLKVARDLMRIFELPSEDGDKATEFGDDRVFNDLRYTINSDKLAALGWKEEKTWEQGLKETVEW 336          
BLAST of EWM28017.1 vs. NCBI_GenBank
Match: gi|1072231043|gb|OEU15776.1| (putative dTDP-glucose 4,6-dehydratase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 479.559 bits (1233), Expect = 2.155e-166
Identity = 228/340 (67.06%), Postives = 273/340 (80.29%), Query Frame = 0
Query:   58 EAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAK-VHNIKRFIHVSTDEVYGEGAA-DQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLMGHGKEEEKMLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWYKQHTGRYGNIDCALVAHPR 395
            +A Y PKNI +TGGAGFI SHV + L KK+P+Y IV  DRLDYCSCLENL E+K  KN+KF+KG+I ++DLV Y L EE IDTIMHFAAQTHVDNSFGNS +FTQ+NI GTHVLLE AK    IKRFIHVSTDEVYGEG   + +PM E+ +LEPTNPYAATKAGAEF+ KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N LM  + +TLHG+G NTRNFLYV DVA AFE ILH+G+ G +YNIGG +E +N++VAK L+++ G   +E++ + +V DR FNDLRYT+NS  L +LGW E +SWE+GL  TV+WYK+ T RYGNI+ ALVAHPR
Sbjct:    6 DAHYVPKNIFLTGGAGFIGSHVAIKLCKKYPEYNIVVYDRLDYCSCLENLGELKGLKNFKFIKGDIATADLVTYALLEENIDTIMHFAAQTHVDNSFGNSLAFTQSNIYGTHVLLECAKNCPTIKRFIHVSTDEVYGEGEDFETDPMTEEHILEPTNPYAATKAGAEFLVKSYFRSFKLPCLITRGNNVYGPHQFPEKLIPKFTNQLMSGKKLTLHGDGTNTRNFLYVTDVAAAFETILHKGLPGHVYNIGGDNEVSNVKVAKTLLKIFGLEDKEDEYITYVPDRQFNDLRYTINSSKLHELGWTEEMSWEEGLKTTVDWYKEFTSRYGNIENALVAHPR 345          
The following BLAST results are available for this feature:
BLAST of EWM28017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110358|gb|EWM28017.1|0.000e+0100.00rhamnose biosynthetic enzyme expressed [Nannochlor... [more]
gi|553187699|ref|XP_005854661.1|0.000e+0100.00dTDP-glucose 4,6-dehydratase [Nannochloropsis gadi... [more]
gi|676384021|ref|XP_009035289.1|4.234e-17972.04hypothetical protein AURANDRAFT_23143, partial [Au... [more]
gi|1210517877|dbj|GAX23278.1|3.559e-17367.15dTDP-glucose 4,6-dehydratase [Fistulifera solaris][more]
gi|224002825|ref|XP_002291084.1|5.282e-17368.42dtdp-glucose 4,6-dehydratase [Thalassiosira pseudo... [more]
gi|1210514462|dbj|GAX26571.1|9.841e-17366.86dTDP-glucose 4,6-dehydratase [Fistulifera solaris][more]
gi|219121781|ref|XP_002181238.1|1.029e-17265.83predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397571503|gb|EJK47833.1|2.146e-17267.52hypothetical protein THAOC_33424 [Thalassiosira oc... [more]
gi|299469656|emb|CBN76510.1|3.087e-16971.34conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072231043|gb|OEU15776.1|2.155e-16667.06putative dTDP-glucose 4,6-dehydratase [Fragilariop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2722rna2722Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications