EWM27996.1, cds2672 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|585110337|gb|EWM27996.1| (fha domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1491.86 bits (3861), Expect = 0.000e+0 Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0
Query: 1 MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA 731
MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA
Sbjct: 1 MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA 731
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|298708564|emb|CBJ30649.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 253.832 bits (647), Expect = 7.825e-71 Identity = 127/273 (46.52%), Postives = 173/273 (63.37%), Query Frame = 0
Query: 264 ITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALG--LSPGRSPRVA--LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFS---------ENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVAT 523
++ ++L L+ D I++DL E A TA +E A L L G V +CYMCFDD D NPLVAPC CKG TRYVHL+CL+ W + + K CV+ + + C +CK+ YK VR G + L + LPPP+ICF+VVT+H EELF+T++QLSF+ K++++GRSR C MVLDYRTVST+HA V ++ G FYF DL SSNGS L LR P++LPY + V +++G ++V+ KA+RS +R RLSS+ G A V
Sbjct: 356 LSWEELTCLKGDIAAIQKDLVTIE-ALTAQEENAEADKLTGVLQNGGGGVVNTRMCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYRTVSTRHANVRFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSSIRHRLSSLVGRRATVTN 627 HSP 2 Score: 92.8189 bits (229), Expect = 6.983e-16 Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 54 DDTAMSVQVKIMPLVPG--TATRDVKTCKITSAGAVLEGKMS-PEIR---------NIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDK----HQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGE 189
D V+V + PG T + +I+S G + G ++ E R +IA EYE+ G + R I D RA+QL+VV + F V APE FSRH+GTC +LG + + + Y L++G+FLRIGSVG++VSE+ G GE
Sbjct: 201 DHKGAHVEVSVFKYQPGVQTPVEQLHNYRISSRGGAITGSLTQTEERRGENVSGSVDIAAEYEKRKGSQVVRHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGAGGE 352
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|635370705|emb|CCI41142.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 219.55 bits (558), Expect = 3.399e-57 Identity = 147/434 (33.87%), Postives = 217/434 (50.00%), Query Frame = 0
Query: 116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGE----VESQGIGGAGGRLTVL---------RGIEGGRGAGEAGAPS-----RQGQGPGSLPDGGNLPMMG---EEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQD--LFAQ---EEAATAVQEGLAATALGLSPGRSPRVALCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR 504
+DD RA L V VG+ F + E FS HTG C+VLG K + + L +GD +RIGSVGL+V+EL+ +E E + + R + +E + ++G S +G G + M G EE+ + G S G + +R ++ EI D F Q +A + + T+ S CY+C+D D D +NPLVAPC C+G T+Y+HL CL+ W + +E + CV+T+ + C ICK Y R DGR++ LL L PPF+ F VVT H+A L NT+FQLSF S +++ IGRS + HM++ YRTVS HA V++++ FY D SSSNG+ML L RPM+L +N+ ++ GR+I+ +A++
Sbjct: 159 LDDTRASSLDVCYDDAVGK-FVCGASIERFSGHTGVCKVLGSKRYTPVQHRLRLGDLIRIGSVGLVVTELNRSEEDENTESLTPHDLEILKARFLSVPLQQTFNTGLSMEQAKEESDSGRSSEECDFNEGDCEGQKQENERERMEGRNSEENDECNELKLQPGNGETSDEGDYEDA----VRVESIEIDDDPSSFVQVCDRDACSLIHPNSRRTSTHAPHDVSRLKRFCYICYDEDADVQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSARLEDGRVISLLPDKLKPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVSFKENEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKK 587
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1072231616|gb|OEU16348.1| (hypothetical protein FRACYDRAFT_169414 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 211.846 bits (538), Expect = 3.474e-57 Identity = 95/214 (44.39%), Postives = 136/214 (63.55%), Query Frame = 0
Query: 314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTG 518
+CYMCFD+ED+ +NPL+ PC C G T +VH+ CLR W + D + C L+S + TC +C++ +K+ + DGR + L + L PP++ LV TKH+ A+ LFNT+FQLSFS + +L+GRS MVLDYRTVS +HA++ ++ G F F D SSNGS L LRRP++L +Q V+ R GRS+++ K W R L ++ TG
Sbjct: 142 ICYMCFDEEDTEANPLITPCKCIGDTAHVHVECLRKWHTAEADNQVCFLSSVD--ATCSVCRSTFKSDFKLKDGRQMKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLMKADGKNATRPLLLGRSSGSDMVLDYRTVSARHASIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQSVQFRLGRSMISMKVVNKWNRRLLRAVRRTG 353 HSP 2 Score: 90.5077 bits (223), Expect = 2.109e-15 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
Query: 107 MGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
+G L R + D RA QL+V + F++VPAPE FSRH+GTCR+LGD+ + L+VGDFLR+GSVG++V E G E V S+
Sbjct: 3 VGRKLQRYELSDTRACQLLVTTHAKSFWVVPAPEAFSRHSGTCRLLGDRKHPPAPHTLQVGDFLRVGSVGVVVIETHNGIENRVLSE 89
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|325192047|emb|CCA26511.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 219.164 bits (557), Expect = 3.700e-57 Identity = 153/452 (33.85%), Postives = 223/452 (49.34%), Query Frame = 0
Query: 116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSS-------------SGKAGRNRRSSRGS--ITEKDLFYLREDAGEIRQDLFAQEEA---ATAVQEGLAATAL----------GLSPGRSPRVA-LCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR--SWMRGRLSSMTGT 517
+DD RA L V VG+ F + E FS HTG C+VLG K + + L +GD +RIGSVGL+V+EL+ ++ E ++ + L +L+ A P +Q + G ++ + EE G SS + RNR R + I E D L GE + + + +++ LAA P +V CY+C+D D D +NPLVAPC C+G T+Y+HL CL+ W + +E + CV+T+ + C ICK Y R DGR++ LL L PPF+ F VVT H+A L NT+FQLSF S +++ IGRS + HM++ YRTVS HA V +++ FY D SSSNG+ML L RPM+L +N+ ++ GR+I+ +A++ W T T
Sbjct: 154 LDDTRASSLDVCYDDTVGK-FVCGASVERFSGHTGVCKVLGSKRYAPVQHQLRLGDLIRIGSVGLVVTELNRTEQDE-NTESLTPHD--LEILK-------ARFLSVPLQQ-----TFNTGLSMEQVKEESDSGRSSEECDFNEGDREDQKQENERNRLEDRDNDEIEECDELKLHPGNGETSDEGDFDDAVRGESIGIEDNLAACKQICDQNSRRGSAQPPNDIFKVKRFCYICYDEDADIQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSTRLEDGRVISLLPDKLMPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVNFKQNEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKKKLKWTDANFGESTYT 589
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|325192046|emb|CCA26510.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 219.55 bits (558), Expect = 3.705e-57 Identity = 153/452 (33.85%), Postives = 223/452 (49.34%), Query Frame = 0
Query: 116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSS-------------SGKAGRNRRSSRGS--ITEKDLFYLREDAGEIRQDLFAQEEA---ATAVQEGLAATAL----------GLSPGRSPRVA-LCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR--SWMRGRLSSMTGT 517
+DD RA L V VG+ F + E FS HTG C+VLG K + + L +GD +RIGSVGL+V+EL+ ++ E ++ + L +L+ A P +Q + G ++ + EE G SS + RNR R + I E D L GE + + + +++ LAA P +V CY+C+D D D +NPLVAPC C+G T+Y+HL CL+ W + +E + CV+T+ + C ICK Y R DGR++ LL L PPF+ F VVT H+A L NT+FQLSF S +++ IGRS + HM++ YRTVS HA V +++ FY D SSSNG+ML L RPM+L +N+ ++ GR+I+ +A++ W T T
Sbjct: 156 LDDTRASSLDVCYDDTVGK-FVCGASVERFSGHTGVCKVLGSKRYAPVQHQLRLGDLIRIGSVGLVVTELNRTEQDE-NTESLTPHD--LEILK-------ARFLSVPLQQ-----TFNTGLSMEQVKEESDSGRSSEECDFNEGDREDQKQENERNRLEDRDNDEIEECDELKLHPGNGETSDEGDFDDAVRGESIGIEDNLAACKQICDQNSRRGSAQPPNDIFKVKRFCYICYDEDADIQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSTRLEDGRVISLLPDKLMPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVNFKQNEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKKKLKWTDANFGESTYT 591
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1210523189|dbj|GAX17826.1| (hypothetical protein FisN_18Hh026 [Fistulifera solaris]) HSP 1 Score: 214.157 bits (544), Expect = 6.641e-57 Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0
Query: 314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTG 516
+CYMCFD+ED+ NP++ PC C G T+YVH+ CLR W + D + C L+S + TC +CK+ +K+ + DGR + L + L PP+I LV TKH+ A+ LFNT+FQLSFS + +L+GRS MVLDYRTVS +HA + ++ G F F D SSNGS L LRRP++L +Q V+ R GRS+++ K W R L ++ G
Sbjct: 278 VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSSVD--ATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSLSQPVQFRLGRSMISMKVTNKWNRRLLRAVRG 487 HSP 2 Score: 99.7525 bits (247), Expect = 4.476e-18 Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 60 VQVKIMPLVPGTA--TRDVKTCKITSAGAVLEGKMSPEIR---NIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
V+VK+ P A + + I G +++G S R ++ EY + +G L R + D RA QL+V G+ F++VPAPE FSRH+GTCR+LGD+ + L+VGDFLR+GSVG++V E G E +V S+
Sbjct: 87 VEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQG--SNRHRSGVDLGAEYAQHVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGVENKVLSE 223
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1210521082|dbj|GAX20088.1| (hypothetical protein FisN_18Lh026 [Fistulifera solaris]) HSP 1 Score: 213.772 bits (543), Expect = 1.026e-56 Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0
Query: 314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTG 516
+CYMCFD+ED+ NP++ PC C G T+YVH+ CLR W + D + C L+S + TC +CK+ +K+ + DGR + L + L PP+I LV TKH+ A+ LFNT+FQLSFS + +L+GRS MVLDYRTVS +HA + ++ G F F D SSNGS L LRRP++L +Q V+ R GRS+++ K W R L ++ G
Sbjct: 279 VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSSVD--ATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQPVQFRLGRSMISMKVTNKWNRRLLRAVRG 488 HSP 2 Score: 100.908 bits (250), Expect = 1.824e-18 Identity = 56/141 (39.72%), Postives = 81/141 (57.45%), Query Frame = 0
Query: 60 VQVKIMPLVPGTA--TRDVKTCKITSAGAVLEGKMSPEIRN-----IAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
V+VK+ P A + + I G +++G RN + EY + +G L R + D RA QL+V G+ F++VPAPE FSRH+GTCR+LGD+ + L+VGDFLR+GSVG++V E G E +V S+
Sbjct: 88 VEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQGSN----RNRSGVDLGTEYAQYVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGLENKVLSE 224
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|223998612|ref|XP_002288979.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976087|gb|EED94415.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 199.134 bits (505), Expect = 5.408e-56 Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 0
Query: 315 CYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIV 498
CYMCFD+ED++ NP++ PC C G TRYVH+ CLR W + D + C L+S + TC +CK+ +++ + DGRL+ L + L PP++ LV TKH+ A+ LFNT+FQLSFS + +L+GRS MVLDYRTVS +HAT+ + G F F D SSNGS L LRRP++L +Q V+ R GRS++
Sbjct: 1 CYMCFDEEDTAENPMITPCKCLGDTRYVHVDCLRKWHTAEADNQVCFLSSVD--ATCSVCKSTFRSDFKLKDGRLVKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLLKPDGRNGTRPLLLGRSSGSDMVLDYRTVSARHATIRLKNGEFIFTDAGSSNGSYLYLRRPVELTPSQSVQFRLGRSMI 191
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|219119727|ref|XP_002180617.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408090|gb|EEC48025.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 197.593 bits (501), Expect = 2.170e-55 Identity = 91/193 (47.15%), Postives = 126/193 (65.28%), Query Frame = 0
Query: 315 CYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIV 498
CYMCFD+EDS NP++ PC C G T+YVH+ CLR W + D + C L+S + TC +CK+ +K+ + DGR L L + L PP++ LV TKH+ A+ LFNT+FQLSFS + +L+GRS MVLDYRTVS +HA++ ++ G F F D SSNGS L LR+P++L +Q V+ R GRS++
Sbjct: 1 CYMCFDEEDSEENPMITPCKCSGDTKYVHVDCLRKWHTAEADNQICFLSSVD--ATCSVCKSTFKSDFKLKDGRHLKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLMKPDGKNATRPLLLGRSSGSDMVLDYRTVSARHASIRFKNGEFIFTDGGSSNGSYLYLRKPLELSPSQAVQFRLGRSMI 191 The following BLAST results are available for this feature:
BLAST of EWM27996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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