EWM27988.1, cds2665 (CDS) Nannochloropsis gaditana

Overview
NameEWM27988.1
Unique Namecds2665
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:934397..936283 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27988.1
Productrna recognition motif-containing protein
Orig transcript idgnl|cribi|Naga_100008g42.7880.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:934397..936283 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_domain
IPR012677Nucleotide-bd_a/b_plait
IPR012816CHP02464_YbiA
IPR000253FHA_dom
IPR000504RRM_dom
Homology
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|585110329|gb|EWM27988.1| (rna recognition motif-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1253.43 bits (3242), Expect = 0.000e+0
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0
Query:    1 MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGSEVRVRRRKKDEEHGPSGGVGPREARVGNTGSRSRASERGSPRNASLAMSSDPLSSTDSPSMTDAAATASARLQQRARESKSGEDERRRGREGGGRRHSRSGSSSAERRERRRGGREEEVDGRCGRDRAGWREVRSASRSRERVRGRERERSHRHRAEHRDRHYGSPRRERGRDRSSDRVWEPSRSGRGERGSDRSRSRERPRRGARKSPTPPRRRAERRSSS 628
            MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGSEVRVRRRKKDEEHGPSGGVGPREARVGNTGSRSRASERGSPRNASLAMSSDPLSSTDSPSMTDAAATASARLQQRARESKSGEDERRRGREGGGRRHSRSGSSSAERRERRRGGREEEVDGRCGRDRAGWREVRSASRSRERVRGRERERSHRHRAEHRDRHYGSPRRERGRDRSSDRVWEPSRSGRGERGSDRSRSRERPRRGARKSPTPPRRRAERRSSS
Sbjct:    1 MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGSEVRVRRRKKDEEHGPSGGVGPREARVGNTGSRSRASERGSPRNASLAMSSDPLSSTDSPSMTDAAATASARLQQRARESKSGEDERRRGREGGGRRHSRSGSSSAERRERRRGGREEEVDGRCGRDRAGWREVRSASRSRERVRGRERERSHRHRAEHRDRHYGSPRRERGRDRSSDRVWEPSRSGRGERGSDRSRSRERPRRGARKSPTPPRRRAERRSSS 628          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|553196285|ref|XP_005856309.1| (rna recognition motif-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292748|gb|EKU20050.1| rna recognition motif-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 454.136 bits (1167), Expect = 6.555e-155
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
Query:    1 MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLP 219
            MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLP
Sbjct:   21 MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLP 239          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|553196282|ref|XP_005856308.1| (rna binding motif protein 34, partial [Nannochloropsis gaditana CCMP526] >gi|422292747|gb|EKU20049.1| rna binding motif protein 34, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 298.901 bits (764), Expect = 1.366e-95
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
Query:  269 EAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGSEVRVRRRKKDE 417
            EAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGG EVRVRRRKKDE
Sbjct:    1 EAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAKRSLALYEVLEDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGLEVRVRRRKKDE 149          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|299469902|emb|CBN76756.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 266.929 bits (681), Expect = 8.547e-76
Identity = 157/383 (40.99%), Postives = 222/383 (57.96%), Query Frame = 0
Query:   36 ITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKR--RGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFT---FDLAAAAKRSLALYEVLEDPLKLAAA-RPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLDRDLMGGSEVRVRR 412
            I  F G+++ LS   K  V L G+        + YP+VEHALQASK+ D   + +I  +K+A+EAK+  R AK P  D   W+  S  + EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+FWG C GKG N LG+LLERVRAD   G      W    F       V +  +V++ G  +  AD + E K ++  GKLA+N+V +AHPS SR HA++VV + +G  LVDL A+NGSF+D RRL P+    + +G + +    S R YT T    DL  A K    LY  + DP+  AA   P+  V++ NL   VTE+ +R+F A+CG + SV +P+ + + + RG A V F   + V+ AL L  D + G  V++RR
Sbjct:   24 IRQFEGDFECLSNTYKCPVSLRGDP-------EPYPSVEHALQASKTDDFELKAAIRQAKNAIEAKKIARVAK-PKPD---WRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADALAG-KDTEAWCATRFQLALPLDVMVGFAVSKAGKIV--ADPSFEGKPVIRMGKLADNEVVMAHPSVSRSHALLVVDRCFGAFLVDLGASNGSFVDGRRLSPYVPEPIKAGGAGLTFAKSKRTYTLTQVETDLREAKKGR--LYASMSDPMASAAQPDPDSTVYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQALTLHMDDLKGQSVKIRR 390          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|403355024|gb|EJY77076.1| (FHA domain containing protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 161.384 bits (407), Expect = 1.405e-38
Identity = 115/393 (29.26%), Postives = 194/393 (49.36%), Query Frame = 0
Query:   35 RITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLV-YENEHNDQ--FWGTCKGKGHNHLGQLLERVRA---DEKEGLLGILLWAKQVFNATSDSK--VRLDVSVTREGHPLPEADLTLERKAIVTFGKLAEN-DVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSE-VALGTSSRRYTFTFDLAAAAK----------RSLALYEVLED--PLKLAAARPELG------VFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLD 399
            +I  F+G ++F+      R   P +   EGE    Y T  HA  A+K  D   R+ I  +   L+     A+   V+ + W  K L +ME + RDKFRR + LR++L  T  ++++ +  + ND+  FWG    +G N+LG++LERVR    DE E    +  W +  FN     K    +++ V ++G  +    +TLE K    FG   +  DV + HPS SR H+  ++ +  G +++DL +  G+ LD++ LE      + +   + V  G S+R Y  + D +   +          R + L E L+D   + +   +  LG      ++++NLP  VT++ ++D   DCG +LS+ +P +  +++ RGFA +    E A   AL  D
Sbjct:   67 KIEGFSGYFEFM------RPDFPAQVYFEGE---MYSTAAHAYNAAKIPDKQLRRRIQKAP-TLQEMYNVARTI-VEPEGWSNKKLKIMEKIQRDKFRRSRDLRERLAATQNREIINHLTDKNDENLFWGMVNKQGQNNLGKILERVRQSVYDESE----MEQWMQNNFNLVEGRKRIPTINLEVFKDGQLI--ESITLENKPYYIFGAHPQKCDVVLKHPSISRVHSAFLIDEDLGVVIMDLMSKAGTKLDDQPLEGCVPQQVKAKADQKVVFGLSTRVYQISIDYSKMQRAVENEKRNLEREMRLLEKLDDVDNMDVDTLKQTLGLIKQDTIYVSNLPFSVTDKDLQDLFGDCGKILSIRMPLNNQTKQGRGFAFITMADEKAARRALNYD 442          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|678342159|emb|CDW73079.1| (fha domain containing protein [Stylonychia lemnae])

HSP 1 Score: 160.229 bits (404), Expect = 2.690e-38
Identity = 118/398 (29.65%), Postives = 188/398 (47.24%), Query Frame = 0
Query:   35 RITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKR--RGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVY---ENEHNDQFWGTCKGKGHNHLGQLLERVRA---DEKEGLLGILLWAKQVFNATSDSKV--RLDVSVTREGHPLPEADLTLERKAIVTFGKLAEN-DVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALH----SGVSEVALGTSSRRYTFTFDLAAAAK----------RSLALYEVLE--DPLKLAAARPELG------VFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLD 399
            +I  FTG ++F+      R   P     EGE    Y T  HA  A+K  DP  R+ I  +    E     R  + P    + W  K L VME ++RDKFRR + +R++L  T  ++++    +    + +WG    +G N LG++LERVR    DE E    +  W +  FN     K    +++ V ++G  +    +TLE K    FG      DV + HPS SR HA  ++ Q  G +L+DL +   + LD++ LE   G   H    +   +V  G S+R Y  + D +   +          R + L E L+  D + +   +  LG      ++++NLP  VTE+ + +   DCG +LS+ +P ++ +++ RGFA +    E A   AL  D
Sbjct:   55 KIEGFTGYFEFM------RPDFPSPVYYEGE---TYSTAAHAYNAAKLIDPNMRRRIQKAPTLQEMYNVARTIEEP----EGWTHKKLKVMERIMRDKFRRSRDMRERLAATQNREIINFLPDKSEENLYWGMVGKQGQNQLGKILERVRQSVHDESE----MEQWMQNNFNLVEGRKKLPSINLEVFKDGQLI--ESITLENKPYYVFGAHPHKCDVVLKHPSMSRVHAAFLIDQDLGVVLIDLMSKAKTKLDDQTLE---GCIPHQVKANSKQKVIFGLSTRVYQISIDYSKMQRAVEIEKKNLEREMRLLEKLDNVDNIDMDTLKSTLGLIKQDTIYVSNLPYSVTEQELMELFNDCGKILSIRMPENKQTKQNRGFAFITMADEKAARRALNYD 430          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|403355446|gb|EJY77299.1| (FHA domain containing protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 159.458 bits (402), Expect = 5.628e-38
Identity = 115/393 (29.26%), Postives = 194/393 (49.36%), Query Frame = 0
Query:   35 RITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLV-YENEHNDQ--FWGTCKGKGHNHLGQLLERVRA---DEKEGLLGILLWAKQVFNATSDSK--VRLDVSVTREGHPLPEADLTLERKAIVTFGKLAEN-DVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSE-VALGTSSRRYTFTFDLAAAAK----------RSLALYEVLED--PLKLAAARPELG------VFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSALKLD 399
            +I  F+G ++F+      R   P +   EGE    Y T  HA  A+K  D   R+ I  +   L+     A+   V+ + W  K L +ME + RDKFRR + LR++L  T  ++++ +  + ND+  FWG    +G N+LG++LERVR    DE E    +  W +  FN     K    +++ V ++G  +    +TLE K    FG   +  DV + HPS SR H+  ++ +  G +++DL +  G+ LD++ LE      + +   + V  G S+R Y  + D +   +          R + L E L+D   + +   +  LG      ++++NLP  VT++ ++D   DCG +LS+ +P +  +++ RGFA +    E A   AL  D
Sbjct:   67 KIEGFSGYFEFM------RPDFPAQVYYEGE---MYSTAAHAYNAAKIPDKQLRRRIQKAP-TLQEMYNVARTI-VEPEGWSNKKLKIMEKIQRDKFRRSRDLRERLAATQNREIINHLTDKNDENLFWGMVNKQGQNNLGKILERVRQSVYDESE----MEQWMQNNFNLVEGRKRIPTINLEVFKDGQLI--ESITLENKPYYIFGAHPQKCDVVLKHPSISRVHSAFLIDEDLGVVIMDLMSKAGTKLDDQILEGCVPQQVKAKADQKVVFGLSTRVYQISIDYSKMQRAVENEKRNLEREMRLLEKLDDVDNMDVDTLKQTLGLIKQDTIYVSNLPFSVTDKDLQDLFGDCGKILSIRMPLNNQTKQGRGFAFITMADEKAARRALNYD 442          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|954197681|gb|KRX10356.1| (SMAD/FHA domain [Pseudocohnilembus persalinus])

HSP 1 Score: 154.066 bits (388), Expect = 1.842e-37
Identity = 118/392 (30.10%), Postives = 187/392 (47.70%), Query Frame = 0
Query:   33 ESRITAFTGEY------DFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLV--YENE-HNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKV--RLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAA----------AKRSLALYEVLEDP-LKLAAARPELG------VFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSAL 396
            E RI  FTG+Y      DF S +  S ++              +P++  A QA++S     R++I S     E      K    D + W+ + L VME+LLRDKFRR+K L+++LM TG +QL+  Y+ E  ++ +WG   GKG NHLG+LLE +R D + G L +  W    F+   D  +   + ++V ++G  +    L LE+K    FG    NDV +AHP  SR HA ++        L+DL +  G++L++  +E + G  L      ++   S+R+Y    D               KR L L E L++P +  A  R  LG      +++ NLP   +   ++D     G+V  V    +   +  +G A+V + T     +AL
Sbjct:   30 EDRIEGFTGDYFSFLHNDFPSLIRFSNLL--------------FPSISSAFQAARSQSQEEREAIASVDSPEELWDLAVKIE--DPEDWEQRKLKVMESLLRDKFRRNKDLKERLMETGNRQLINTYDEETESNLYWGHINGKGQNHLGKLLENIRNDIQRG-LDLHKWIFFTFSLERDLNLVPLIKLNVFKDGKQIET--LNLEKKNFFIFGTQKTNDVILAHPMISRQHACILCDNEQNIKLIDLGSKGGTYLNDELIEEYTGVDLEFD-DVISFSVSTRKYYVEIDYTQVYNSLMKQERDLKRELMLLEKLDNPNISKAELREVLGFSVEDTIYVGNLPFSASISDIKDHFKQYGSVKKVKFLENSIGK-SKGVALVTYKTPQQAKTAL 400          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|471226787|ref|XP_004032421.1| (hypothetical protein IMG5_122670 [Ichthyophthirius multifiliis] >gi|340504387|gb|EGR30834.1| hypothetical protein IMG5_122670 [Ichthyophthirius multifiliis])

HSP 1 Score: 142.124 bits (357), Expect = 8.452e-33
Identity = 113/402 (28.11%), Postives = 186/402 (46.27%), Query Frame = 0
Query:   31 LVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNT---------------GTKQLVY--ENEH-NDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVR--LDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAAAK----RSLALYEVL-------------EDPLKLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSVAVPRHRTSQEPRGFAIVMFGTEAAVVSA 395
            L + RI  F   + FLS    S V+   E ++       YP+V  A QAS+S++   R  I S  D+ E     A+    D Q W  K L +ME LLRDKFRR K LR++L  T                 +QL+Y  ENE  +D FWG CKG+G+N+ G LLE +R D  E    +  W    F    D K+   + + V++ G  +    + L+ ++    G+    +V + HP+ SR HA  V  +    L++D+++ +G+FL+   +E      L +G  ++    S+R Y    D + A K    R + L + +             E+  KL        +F++NLP + ++  ++ + +    V  V +P  + +   + FA ++F  +  + SA
Sbjct:   10 LKKDRIDKFEDYFSFLSNEYPSWVLY--ENIL-------YPSVSAAFQASRSTNQQIRLQI-SQIDSPEELWEIAQEIE-DPQDWGEKRLKIMEILLRDKFRRSKELRERLRLTEEKYKIKIKKKKKYISDRQLIYSYENETPSDMFWGVCKGRGYNNAGILLETIRKDISEN-QDMKKWMLTKFRIEQDVKLLPIITLKVSKNGQQI--ETIILKSRSYYYLGQYKTCNVLLTHPTVSRLHACFVCQETQKILIIDMDSKSGTFLNSEIIESLHDKQLQNG-DQLKFALSTRTYEIFIDYSEANKELQRRKIQLQKDIQQLRKVNQKNIPDEELQKLLGFSINDTLFVSNLPNNTSQTKLKKYFSQYAKVKQVKIPFDKKTGRQKNFAYIIFENQDELRSA 396          
BLAST of EWM27988.1 vs. NCBI_GenBank
Match: gi|118367274|ref|XP_001016852.1| (FHA domain protein [Tetrahymena thermophila SB210] >gi|89298619|gb|EAR96607.1| FHA domain protein (macronuclear) [Tetrahymena thermophila SB210])

HSP 1 Score: 128.257 bits (321), Expect = 2.873e-27
Identity = 112/396 (28.28%), Postives = 180/396 (45.45%), Query Frame = 0
Query:   36 ITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSI--LSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLV---YENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDV---SVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFTFDLAAA----AKRSLALYEVL-------------EDPLKLAAARPELGVFMNNLPKDVTEEMVRD------------------FVADCGTVLSVAVPRHRTSQEPRGFAIVMFGT 388
            I  F   + FL+    S ++   EG++       YP+V  A Q +++ D   +Q I  + S D L       + P      W+ + L VME L+RDKFRR   LR++L  T  KQLV   +E   ++ FWG    KG N +G++LE+VR D  + +  +  W +  F    D K+ L V   +V+++G  +    +TL+ ++    G+   N V +AHPS SR HA ++  +     LVD+E+ +GSF++   LE      L +G   +    S+R Y    D  AA     KRS+ L + +             E+  ++     +  +F++ LP + T   +R+                  F      V  V +P  + S  P+GFA V F T
Sbjct:   22 IDKFEEYFSFLNNDEPSWILY--EGIL-------YPSVSVAFQGARAQDFEIKQKIADVDSPDDLILLASEIEDP----PDWENRRLKVMEILIRDKFRRSLELRERLRLTEEKQLVCRFFEESPSNLFWGIVGSKGQNQIGRILEKVRGDIHQNV-DLKKWMQTKFPLQQD-KILLPVITLNVSKDGEQI--ETITLKERSYYYMGQYKTNSVILAHPSISRLHACLICEEGNKVRLVDMESKSGSFVNGEILEKLFDKELQTG-DILTFALSTRSYEINIDYTAAKQELQKRSIQLQQQVKQLQKLNQPSITPEELRRIMGFDIDNTLFISGLPDNATVLGIREMFERISEPKNKDENEKKKFQGIKIKVQEVKIPVDKWSGRPKGFAYVTFQT 399          
The following BLAST results are available for this feature:
BLAST of EWM27988.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110329|gb|EWM27988.1|0.000e+0100.00rna recognition motif-containing protein [Nannochl... [more]
gi|553196285|ref|XP_005856309.1|6.555e-155100.00rna recognition motif-containing protein, partial ... [more]
gi|553196282|ref|XP_005856308.1|1.366e-9599.33rna binding motif protein 34, partial [Nannochloro... [more]
gi|299469902|emb|CBN76756.1|8.547e-7640.99conserved unknown protein [Ectocarpus siliculosus][more]
gi|403355024|gb|EJY77076.1|1.405e-3829.26FHA domain containing protein (macronuclear) [Oxyt... [more]
gi|678342159|emb|CDW73079.1|2.690e-3829.65fha domain containing protein [Stylonychia lemnae][more]
gi|403355446|gb|EJY77299.1|5.628e-3829.26FHA domain containing protein (macronuclear) [Oxyt... [more]
gi|954197681|gb|KRX10356.1|1.842e-3730.10SMAD/FHA domain [Pseudocohnilembus persalinus][more]
gi|471226787|ref|XP_004032421.1|8.452e-3328.11hypothetical protein IMG5_122670 [Ichthyophthirius... [more]
gi|118367274|ref|XP_001016852.1|2.873e-2728.28FHA domain protein [Tetrahymena thermophila SB210]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2673rna2673Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications