EWM28022.1, cds2663 (CDS) Nannochloropsis gaditana

Overview
NameEWM28022.1
Unique Namecds2663
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:927467..927958 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28022.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g40.7914.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:927467..927958 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM28022.1 vs. NCBI_GenBank
Match: gi|585110363|gb|EWM28022.1| (hypothetical protein Naga_100008g40 [Nannochloropsis gaditana])

HSP 1 Score: 324.324 bits (830), Expect = 3.223e-112
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:    1 MSSVKHAEARTTAKAAAHGIQQSEGHDGADETGAMEGSLVEDMAYQRNVSMELARKLSQDLDAKKKLLGGRLQNALRLSTEAEIRLNQANREYQVKHLTLRKRMLTIVATLALASLIGWLISALLTHRFQLGAVLILPLSVIAGIYLFGKLEGEDGLLSLAWS 163
            MSSVKHAEARTTAKAAAHGIQQSEGHDGADETGAMEGSLVEDMAYQRNVSMELARKLSQDLDAKKKLLGGRLQNALRLSTEAEIRLNQANREYQVKHLTLRKRMLTIVATLALASLIGWLISALLTHRFQLGAVLILPLSVIAGIYLFGKLEGEDGLLSLAWS
Sbjct:    1 MSSVKHAEARTTAKAAAHGIQQSEGHDGADETGAMEGSLVEDMAYQRNVSMELARKLSQDLDAKKKLLGGRLQNALRLSTEAEIRLNQANREYQVKHLTLRKRMLTIVATLALASLIGWLISALLTHRFQLGAVLILPLSVIAGIYLFGKLEGEDGLLSLAWS 163
The following BLAST results are available for this feature:
BLAST of EWM28022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110363|gb|EWM28022.1|3.223e-112100.00hypothetical protein Naga_100008g40 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2671rna2671Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications