EWM27979.1, cds2660 (CDS) Nannochloropsis gaditana

Overview
NameEWM27979.1
Unique Namecds2660
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:919000..919159 -
Alignment locationCM002459.1:917229..918685 -
Alignment locationCM002459.1:916804..917175 -
Alignment locationCM002459.1:916558..916758 -

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Properties
Property NameValue
Protein idEWM27979.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g35.7871.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:919000..919159 -
CM002459.1supercontigCM002459.1:917229..918685 -
CM002459.1supercontigCM002459.1:916804..917175 -
CM002459.1supercontigCM002459.1:916558..916758 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM27979.1 vs. NCBI_GenBank
Match: gi|585110320|gb|EWM27979.1| (hypothetical protein Naga_100008g35 [Nannochloropsis gaditana])

HSP 1 Score: 1494.56 bits (3868), Expect = 0.000e+0
Identity = 729/729 (100.00%), Postives = 729/729 (100.00%), Query Frame = 0 
Query:    1 MPGYMSKTGTVQRSEIAVSAPENACQLPQSYPEHIKFCLLLSSLALLARKCSGGMKRNEARVTKARNASTTGPATSAPPQQPAPPLRTAGRMQRTSQSPSVDDTAFQQGLILLAAGTLAAFVLMRTLSALLRSLPLLALGMYLSRPSFESFVEFLSTSEKIGDLNCATKKSSLNAAGTSTASSGVWFKNVIRKTLGKSSEALFTNPVRDWKCLDMGLFVVCKKQKSALEELSANLTGRSTPYGKHVFAVGMCRQWLLLDPGCLDPRKKEEWPLWKLYAYNAACFCYMRVSDAWWHALPSFAAHERSSRTQATLGTATAAAMAEEALQDVVGGCLDDSRKYGGVDQVDVGVPVRDRRVGMVGNCTPGADGPPMRRHLQAAQALAERGNFQEAGRTVEMGVKDARGQLRGGSEEEREMWSVAGAFYEAGRSSSTCRAGRLRCLGEVARLWVAQERWEKAAELFQECVAACTEAQACARAPALREGPQYALSSVLALAMYGDTLQATAWHTSLCDSHSWYGVTPEAGLAGEILRGLEQHNPRREGLGGVGGGGGDEAHATCGCPSLAVRLVSGYRCQERPTPACEALQDTTTSPPLANRSPLFSLSHLACLQGGARKRVLRLDAVWDSQHPSFRRSLHMPAKRNSSFSPCVCRPRLTAAISCRWVNIPSSRKNAGRCASTPLARSLVTPFNVAMPGENRRCRAVNERAIPLGGGPNHFFCPRNAERDRCKKK 729
            MPGYMSKTGTVQRSEIAVSAPENACQLPQSYPEHIKFCLLLSSLALLARKCSGGMKRNEARVTKARNASTTGPATSAPPQQPAPPLRTAGRMQRTSQSPSVDDTAFQQGLILLAAGTLAAFVLMRTLSALLRSLPLLALGMYLSRPSFESFVEFLSTSEKIGDLNCATKKSSLNAAGTSTASSGVWFKNVIRKTLGKSSEALFTNPVRDWKCLDMGLFVVCKKQKSALEELSANLTGRSTPYGKHVFAVGMCRQWLLLDPGCLDPRKKEEWPLWKLYAYNAACFCYMRVSDAWWHALPSFAAHERSSRTQATLGTATAAAMAEEALQDVVGGCLDDSRKYGGVDQVDVGVPVRDRRVGMVGNCTPGADGPPMRRHLQAAQALAERGNFQEAGRTVEMGVKDARGQLRGGSEEEREMWSVAGAFYEAGRSSSTCRAGRLRCLGEVARLWVAQERWEKAAELFQECVAACTEAQACARAPALREGPQYALSSVLALAMYGDTLQATAWHTSLCDSHSWYGVTPEAGLAGEILRGLEQHNPRREGLGGVGGGGGDEAHATCGCPSLAVRLVSGYRCQERPTPACEALQDTTTSPPLANRSPLFSLSHLACLQGGARKRVLRLDAVWDSQHPSFRRSLHMPAKRNSSFSPCVCRPRLTAAISCRWVNIPSSRKNAGRCASTPLARSLVTPFNVAMPGENRRCRAVNERAIPLGGGPNHFFCPRNAERDRCKKK
Sbjct:    1 MPGYMSKTGTVQRSEIAVSAPENACQLPQSYPEHIKFCLLLSSLALLARKCSGGMKRNEARVTKARNASTTGPATSAPPQQPAPPLRTAGRMQRTSQSPSVDDTAFQQGLILLAAGTLAAFVLMRTLSALLRSLPLLALGMYLSRPSFESFVEFLSTSEKIGDLNCATKKSSLNAAGTSTASSGVWFKNVIRKTLGKSSEALFTNPVRDWKCLDMGLFVVCKKQKSALEELSANLTGRSTPYGKHVFAVGMCRQWLLLDPGCLDPRKKEEWPLWKLYAYNAACFCYMRVSDAWWHALPSFAAHERSSRTQATLGTATAAAMAEEALQDVVGGCLDDSRKYGGVDQVDVGVPVRDRRVGMVGNCTPGADGPPMRRHLQAAQALAERGNFQEAGRTVEMGVKDARGQLRGGSEEEREMWSVAGAFYEAGRSSSTCRAGRLRCLGEVARLWVAQERWEKAAELFQECVAACTEAQACARAPALREGPQYALSSVLALAMYGDTLQATAWHTSLCDSHSWYGVTPEAGLAGEILRGLEQHNPRREGLGGVGGGGGDEAHATCGCPSLAVRLVSGYRCQERPTPACEALQDTTTSPPLANRSPLFSLSHLACLQGGARKRVLRLDAVWDSQHPSFRRSLHMPAKRNSSFSPCVCRPRLTAAISCRWVNIPSSRKNAGRCASTPLARSLVTPFNVAMPGENRRCRAVNERAIPLGGGPNHFFCPRNAERDRCKKK 729
The following BLAST results are available for this feature:
BLAST of EWM27979.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110320|gb|EWM27979.1|0.000e+0100.00hypothetical protein Naga_100008g35 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2668rna2668Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications