EWM28024.1, cds2654 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|585110365|gb|EWM28024.1| (atp-dependent clp protease atp-binding subunit [Nannochloropsis gaditana]) HSP 1 Score: 1510.35 bits (3909), Expect = 0.000e+0 Identity = 739/739 (100.00%), Postives = 739/739 (100.00%), Query Frame = 0
Query: 1 MLGSCGRSASRQAIWRLRKVKLTLACNRSWLSSALPRSGNSSIIHASSVSDSSPSSEVQCQAAAPEQQQAQLTRPRHNHAHEGYQQQVDCKLIVRTPAVTSLPSLPPEQPRQSFRCPRCANYLATAIDASGGTDGTYFCSVCSIWVLSTGQGSCEKAFYLPSPADSVLQRKVNNPPPPSSPPPAPEGPFFPAAKPGLPSPGSNPPPGSPDDPFMTQHASHSNNFPPARAAPDTHVPPHGQGPPPTFRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKVRLLHEPMTLSKYLAEMQGEHPHHGMAPVEGDGPEDDHHGHQHQQPQSMVGGV 739
MLGSCGRSASRQAIWRLRKVKLTLACNRSWLSSALPRSGNSSIIHASSVSDSSPSSEVQCQAAAPEQQQAQLTRPRHNHAHEGYQQQVDCKLIVRTPAVTSLPSLPPEQPRQSFRCPRCANYLATAIDASGGTDGTYFCSVCSIWVLSTGQGSCEKAFYLPSPADSVLQRKVNNPPPPSSPPPAPEGPFFPAAKPGLPSPGSNPPPGSPDDPFMTQHASHSNNFPPARAAPDTHVPPHGQGPPPTFRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKVRLLHEPMTLSKYLAEMQGEHPHHGMAPVEGDGPEDDHHGHQHQQPQSMVGGV
Sbjct: 1 MLGSCGRSASRQAIWRLRKVKLTLACNRSWLSSALPRSGNSSIIHASSVSDSSPSSEVQCQAAAPEQQQAQLTRPRHNHAHEGYQQQVDCKLIVRTPAVTSLPSLPPEQPRQSFRCPRCANYLATAIDASGGTDGTYFCSVCSIWVLSTGQGSCEKAFYLPSPADSVLQRKVNNPPPPSSPPPAPEGPFFPAAKPGLPSPGSNPPPGSPDDPFMTQHASHSNNFPPARAAPDTHVPPHGQGPPPTFRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKVRLLHEPMTLSKYLAEMQGEHPHHGMAPVEGDGPEDDHHGHQHQQPQSMVGGV 739
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|970654597|gb|KUF92890.1| (ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae] >gi|970664582|gb|KUG01466.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae]) HSP 1 Score: 483.026 bits (1242), Expect = 3.019e-160 Identity = 255/472 (54.03%), Postives = 325/472 (68.86%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQE-LAG-------DIDPTLLATPGM-----HIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQ 704
R+LTP++IY GL+EYVIGQ VK LAVGVHNHYKRL ++ E + ++ SQ AG D+D + L++ G I P + VP + +S ++ +P R S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MF++PD V A+ VD EA+ RK L+ MTL +YL ++
Sbjct: 54 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEE----TAEAPKTTETTHTHATRLQHHSLGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEAILGRKRPVLIRGVMTLDEYLKNLE 519
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|568042950|gb|ETM40261.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica]) HSP 1 Score: 480.715 bits (1236), Expect = 4.312e-157 Identity = 255/474 (53.80%), Postives = 325/474 (68.57%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCR----APPARQQEQEQSTQSSLSQELAGDIDPTLLATPGM-----HIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQGE 706
R+LTP++IY GL+EYVIGQ VK LAVGVHNHYKRL +Q R A A+ Q ++ D+D + L++ G I P + VP + +S ++ +P R S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MF++PD V A+ VD EA+ RK L+ MTL +YL ++ +
Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEE----TAEAPKTTETTHTHATRLQHHSLGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEAILGRKRPVLIRGEMTLDEYLKNLEDD 681
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|1214697327|gb|OWZ10628.1| (ATP-dependent Clp protease [Phytophthora megakarya]) HSP 1 Score: 479.559 bits (1233), Expect = 8.766e-157 Identity = 266/514 (51.75%), Postives = 339/514 (65.95%), Query Frame = 0
Query: 219 SHSNNFP----PARAAPDTHVPP--------HGQGPPPTFRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCR----APPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPP---PPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPR-QSEGEGN-VKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQGE 706
++S NFP P+R D G R+LTP++IY+GL+EYVIGQ VK LAVGVHNHYKRL +Q R A A+ Q ++ D+D + L++ G + P S Q +S + + +S +PL P R Q G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I +T ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS E+L++VLTEP+N+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MFD+PD V A+ VD EA+ RK L+ MTL +YL ++ E
Sbjct: 169 TYSGNFPSPTRPSRMNADGEYEKLANEALFSAGDTTVTKDRVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHPAGTQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGAEKRDEASQSSKQHTSEDTAETSETPL------PAHTHATRLQHHTLGDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITINTTNILFICGGAFAGLEKQVTSRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKEELVQVLTEPRNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDMPDMKDVRAVYVDEEAILGRKRPVLVRGDMTLDEYLKNLEEE 675
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|675201991|ref|XP_008909880.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310] >gi|568090106|gb|ETN04943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310]) HSP 1 Score: 479.945 bits (1234), Expect = 9.066e-157 Identity = 255/474 (53.80%), Postives = 325/474 (68.57%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCR----APPARQQEQEQSTQSSLSQELAGDIDPTLLATPGM-----HIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQGE 706
R+LTP++IY GL+EYVIGQ VK LAVGVHNHYKRL +Q R A A+ Q ++ D+D + L++ G I P + VP + +S ++ +P R S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MF++PD V A+ VD EA+ RK L+ MTL +YL ++ +
Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEE----TAEAPKTTETTHTHATRLQHHSLGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEAILGRKRPVLIRGVMTLDEYLKNLEDD 681
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|566017367|gb|ETI40278.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1569] >gi|567954753|gb|ETK80386.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|567983418|gb|ETL33811.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|568012912|gb|ETL87089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >gi|570321047|gb|ETO68995.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1976] >gi|570944846|gb|ETP10103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica CJ01A1] >gi|570976365|gb|ETP38190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P10297]) HSP 1 Score: 479.559 bits (1233), Expect = 1.061e-156 Identity = 255/474 (53.80%), Postives = 325/474 (68.57%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCR----APPARQQEQEQSTQSSLSQELAGDIDPTLLATPGM-----HIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQGE 706
R+LTP++IY GL+EYVIGQ VK LAVGVHNHYKRL +Q R A A+ Q ++ D+D + L++ G I P + VP + +S ++ +P R S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MF++PD V A+ VD EA+ RK L+ MTL +YL ++ +
Sbjct: 210 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEE----TAEAPKTTETTHTHATRLQHHSLGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEAILGRKRPVLIRGEMTLDEYLKNLEDD 677
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|695391535|ref|XP_009520055.1| (hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae] >gi|348684952|gb|EGZ24767.1| hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae]) HSP 1 Score: 479.559 bits (1233), Expect = 1.599e-156 Identity = 253/468 (54.06%), Postives = 326/468 (69.66%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMH-----IPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQ 704
R+LTP++IY+GL+EYVIGQ VK LAVGVHNHYKRL +Q R ++Q ++ D+D + L++ G I P + + + +++ S ++ H R + S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG++I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A ALSKNTGARGLRSI ER LM+ MFD+PD V A+ VD EA+ RK L+ MTL +YL ++
Sbjct: 230 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKDAEAACAKQQHARAGGVTRQHVDLDDSRLSSIGRRLLLEEIYPGLEKKEAGLEQEAKQRAAEGTSETSEAAAAAPSHAHATRLQ--HHSLGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSDQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALSKNTGARGLRSIFERALMETMFDLPDMNDVRAVYVDEEAILGRKRPVLIRGDMTLDEYLKNLE 693
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|301118793|ref|XP_002907124.1| (ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4] >gi|262105636|gb|EEY63688.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4]) HSP 1 Score: 475.707 bits (1223), Expect = 4.121e-155 Identity = 256/475 (53.89%), Postives = 324/475 (68.21%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRL----AVQCR----APPARQQEQEQSTQSSLSQELAGDIDPTLLATPGM-----HIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAV--HSRKVRLLHEPMTLSKYLAEMQGE 706
R+LTP++IY+GL+EYVIGQ VK LAVGVHNHYKRL +Q R A A+ Q ++ D+D L+ G I P + +PP +S ++ ++ R S G+ ++ ++ VELDKTN++L+GPTGSGKTLLAKTLARL VP +IADATCLTQAGYVGEDVES+L+KLY A +LE QRGIVYIDEIDK++RKSENVSITRDVSGEGVQQALLKI+EGS+VNVP++GGRKNPRG+ I DT ++LFICGGAFAGLE +T R S +SIGFGA + P L+ + EP DLV YG++PEF+GRFP++VST+GLS ++L++VLTEPKN+L++QY+ LFAL VEFH T ALE +A AL KNTGARGLRSI ER LM+ MFD+PD V A+ VD EA+ H R V L+ MTL +YL ++ +
Sbjct: 217 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHNASSQHPRAGGVTRQHVDMDDPRLSNIGRRLLLEEIYPGSDKNDAEMPPTSKQHASEETAEVTKTTE----TTHTHATRLQHHSMGD-KLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQM-PNMRLKDSNQIGQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDLPDMNDVRAVYVDEEAILGHKRPV-LIRGEMTLDEYLKNLEDD 684
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|673043911|ref|XP_008875916.1| (ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans] >gi|574468196|gb|ETV95215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aphanomyces invadans]) HSP 1 Score: 471.47 bits (1212), Expect = 1.111e-154 Identity = 259/518 (50.00%), Postives = 330/518 (63.71%), Query Frame = 0
Query: 207 GSPDDPFMT---QHASHSNNFPPARAAPDTH---VPPHGQGPPPT-----FRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAE----MQGEHP 708
G P F T H SH +N R ++ + G P ++LTP+QI+ GL+ YVIGQ AVK AL+VGVHNHYKRL++ + A EQ + T SL G+H+ ++ DP +S + D VELDKTN++++GPTGSGKTL+AKTLAR+ VP +IADATCLTQAGYVGEDVESIL+KLY A D++ AQRGIVYIDEIDK+SRKSENVSITRDVSGEGVQQALLK++EG VVNVP++GGRKNPRG+FI DT ++LFICGGAFAGLE ++ R +++SIGFGA + P L+ + EP DLV YG++PEFVGRFPVVVST GLS ++L+RVLTEPKN+L+KQY+ LFAL+ VEFHV+ LE +A LA+ +NTGARGLR+I ER L++ MF IPD P V A+ VD + + RK L+ ++L+ YL+E + EHP
Sbjct: 143 GGPSSGFSTYGGDHTSHMSNVSGPRLTSESEYNRIVHQGTVAPAVQSERQEQVLTPRQIFDGLNTYVIGQDAVKKALSVGVHNHYKRLSMHAKKKKA-SAEQNRGTIHSLGH--------------GVHV--------EAINADPRLESRP----------------------------------KADEVELDKTNMMIVGPTGSGKTLMAKTLARMAQVPLVIADATCLTQAGYVGEDVESILFKLYQAANYDVDAAQRGIVYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCVVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEKIVSRRTASSSIGFGARM-PNTKLDELDNIGQLLTQSEPQDLVSYGLIPEFVGRFPVVVSTLGLSQDELVRVLTEPKNSLVKQYQALFALNDVEFHVSRCGLEAVADLAVQRNTGARGLRAIFERALVETMFHIPDMPNVNAVYVDSDVIAGRKQPVLIRNDVSLADYLSEKDKAYEVEHP 602
BLAST of EWM28024.1 vs. NCBI_GenBank
Match: gi|1173940999|gb|OQR90264.1| (ATP-dependent Clp protease ATP-binding subunit clpX [Thraustotheca clavata]) HSP 1 Score: 468.389 bits (1204), Expect = 8.064e-154 Identity = 250/476 (52.52%), Postives = 311/476 (65.34%), Query Frame = 0
Query: 247 RLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQEQSTQSSLSQELAGDIDPTLLATPGMHIPPPPPPAPSSVPPDPSHQSSSSNPSISSSSP----LREFH--PSPFRRRGPRQSEGEGNVK-QVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATVRPKAALEGQAAQSDTYDRV-------EPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVDHEAVHSRKV-RLLHEPMTLSKYLAEMQGEH 707
++LTP++IY GL++YVIGQ VK ALAVGVHNHYKRL++ + P P PS+ P +P + S L P + G + + + K +D VE+DKTNIL++GPTGSGKTL+AKTLARL VP +IADATCLTQAGYVGEDVESILYKLY A D+E QRGI+YIDEIDK+SRKSENVSITRDVSGEGVQQALLK++EG VNVP++GGRKNPRG+FI DT ++LFICGGAFAGLEH ++ R + +SIGF AT++ E DRV EP DLV YG++PEFVGRFPV+VST GL+ +L+RV++EPKN+LIKQY+ LF+LH V FHVT+ L IA LA+ +NTGARGLR+ILER LM+ MF IPD V A+ VD E + +K L+ + +TL +YLAE H
Sbjct: 146 KVLTPREIYDGLNKYVIGQDNVKKALAVGVHNHYKRLSMNMK---------------------------------------PKAPEPSAFDDHPKSLKMPEDPPVYQSMKHGIQLEAIAVPPGALKNEGNAAEQKKHDKKISMDEVEIDKTNILVVGPTGSGKTLMAKTLARLAQVPLVIADATCLTQAGYVGEDVESILYKLYQAANFDVEATQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKMLEGCTVNVPEKGGRKNPRGEFISIDTTNILFICGGAFAGLEHIVSRRTAQSSIGFDATMKDTKVTE--------LDRVGQLLTQSEPQDLVAYGLIPEFVGRFPVLVSTLGLNRPELVRVVSEPKNSLIKQYKALFSLHEVNFHVTDCGLNAIAELAIQRNTGARGLRAILERTLMETMFHIPDMKNVHAVYVDEEVIFGQKQPVLIRDGITLEQYLAEKDEMH 574 The following BLAST results are available for this feature:
BLAST of EWM28024.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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