EWM28049.1, cds2623 (CDS) Nannochloropsis gaditana

Overview
NameEWM28049.1
Unique Namecds2623
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:835114..835268 +
Alignment locationCM002459.1:835357..835845 +
Alignment locationCM002459.1:836021..837425 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28049.1
Productsun protein
Orig transcript idgnl|cribi|Naga_100044g6.1063.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:835114..835268 +
CM002459.1supercontigCM002459.1:835357..835845 +
CM002459.1supercontigCM002459.1:836021..837425 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001678MeTrfase_RsmB/NOP2
IPR006027NusB_RsmB_TIM44
IPR023267RCMT
Homology
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|585110391|gb|EWM28049.1| (sun protein [Nannochloropsis gaditana])

HSP 1 Score: 1388.63 bits (3593), Expect = 0.000e+0
Identity = 682/682 (100.00%), Postives = 682/682 (100.00%), Query Frame = 0
Query:    1 MLLFEAGARMQCRCSAGGNFYFTLVFSAIRCSRGLRSSSSFPLPYRDAALRRRLLLLLLVALLLDLVPAFTGQQHPGNRRGRRPEGKRPPGKHPEDTPQTSTQSSDASHRAIPRFIPPSRARSPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALRRKASPHM 682
            MLLFEAGARMQCRCSAGGNFYFTLVFSAIRCSRGLRSSSSFPLPYRDAALRRRLLLLLLVALLLDLVPAFTGQQHPGNRRGRRPEGKRPPGKHPEDTPQTSTQSSDASHRAIPRFIPPSRARSPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALRRKASPHM
Sbjct:    1 MLLFEAGARMQCRCSAGGNFYFTLVFSAIRCSRGLRSSSSFPLPYRDAALRRRLLLLLLVALLLDLVPAFTGQQHPGNRRGRRPEGKRPPGKHPEDTPQTSTQSSDASHRAIPRFIPPSRARSPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALRRKASPHM 682          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|742762362|gb|KIC71745.1| (putative ribosomal RNA small subunit methyltransferase B [Neochlamydia sp. TUME1])

HSP 1 Score: 228.794 bits (582), Expect = 1.728e-64
Identity = 169/554 (30.51%), Postives = 270/554 (48.74%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPG-EGLKGAFDGGFGCALRRK 677
            REAA+ A+L + + ++FI++YL +W ++++PSS +  LA  +A  + + A +LD+   AL  +E     ++ ++LK +++A+LRTAL Q+ +  ++P YAIV++++++AK++     F ++ NA+LRK                                  +  L LP+G    +L+ R S+P + +K L + +G    I I++ASN     MAR R                           + V++  E                W TV   P+ +         + V+ S+V  + +  +  +YI N TPA L+  L+QG  K             P   +LD+CA+PGGK LA+ D       + +L  NDV+  K  ++ +N A++G+  +V  + G+   L KK                  FD++VLDVPCSN+GVL +RPEARWRL +    K+L+  QF+LLKHA   L        EIWY+TCSIL  E+E +V  AC+EL L          +   + +LP  EG    +DGGF C L +K
Sbjct:    5 REAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALALDYL--ALQLSE-----KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHSY-FVAYLNAILRKF--------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLR---------------------------NIVEIPAE----------------WNTVIEEPVKV---------ITVLASEV--KKVASSADYYIQNVTPASLIGSLSQGINKA------------PT-SILDICASPGGKTLALHDFFP----QAALYANDVSLHKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQFNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVAIACQELDL---------IKKNLISILPNAEG----WDGGFACCLVKK 411          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|1169628384|ref|WP_080502509.1| (hypothetical protein [Neochlamydia sp. TUME1])

HSP 1 Score: 229.565 bits (584), Expect = 1.761e-64
Identity = 169/556 (30.40%), Postives = 271/556 (48.74%), Query Frame = 0
Query:  123 SPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPG-EGLKGAFDGGFGCALRRK 677
            + REAA+ A+L + + ++FI++YL +W ++++PSS +  LA  +A  + + A +LD+   AL  +E     ++ ++LK +++A+LRTAL Q+ +  ++P YAIV++++++AK++     F ++ NA+LRK                                  +  L LP+G    +L+ R S+P + +K L + +G    I I++ASN     MAR R                           + V++  E                W TV   P+ +         + V+ S+V  + +  +  +YI N TPA L+  L+QG  K             P   +LD+CA+PGGK LA+ D       + +L  NDV+  K  ++ +N A++G+  +V  + G+   L KK                  FD++VLDVPCSN+GVL +RPEARWRL +    K+L+  QF+LLKHA   L        EIWY+TCSIL  E+E +V  AC+EL L          +   + +LP  EG    +DGGF C L +K
Sbjct:   30 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALALDYL--ALQLSE-----KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHSY-FVAYLNAILRKF--------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLR---------------------------NIVEIPAE----------------WNTVIEEPVKV---------ITVLASEV--KKVASSADYYIQNVTPASLIGSLSQGINKA------------PT-SILDICASPGGKTLALHDFFP----QAALYANDVSLHKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQFNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVAIACQELDL---------IKKNLISILPNAEG----WDGGFACCLVKK 438          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|502946273|ref|WP_013181249.1| (ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila] >gi|297375691|gb|ADI37521.1| putative ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila WSU 86-1044] >gi|337292440|emb|CCB90462.1| putative ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila 2032/99])

HSP 1 Score: 226.868 bits (577), Expect = 1.115e-63
Identity = 174/560 (31.07%), Postives = 261/560 (46.61%), Query Frame = 0
Query:  119 SRARSPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQ--GAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALRR 676
            ++ ++PREAAYLA+L++ R+++F+ D LA W  + RPS  +  LA  VA    R A +LD     LA        ++ + LK R++ + R  L Q+ Y  ++PLYAIV++ +++AK +    +F  F NA LRK+                                +I P  LP+G +   L+ R SYP + V+ LVQ FG   A  IM+A N     M R R P+A  PK                E +  +D    +A +                                +GV+    L+  ++ +  +YI N TPA L++ LAQ  GA K                 +LD+C++PGGK +   D+         L  NDV+  K   ++EN A++G+S  +    G+   L++K                  FD+V+LDVPCSN GVL +RPEARWRL     L++LE  Q  LL+   E L    ++  E+WYLTCS+L  E+  +++K C+EL LE           L+  +LP       +DGGFGCALR+
Sbjct:    4 TKTKNPREAAYLALLSSAREESFLIDSLAQWQAKCRPSIQDYHLAREVAYGTTRMALALDHLALQLAD-------KKKLALKLREKILFRMGLYQFHYMDKIPLYAIVDETIKIAKIHCHE-SFVKFLNACLRKVE-------------------------------EIDP-QLPKGETVPELSIRYSYPAYYVQELVQNFGLEKAEEIMEAGNRPSQTMFRVR-PQASRPK----------------EANGEIDF---LAGTRCG-----------------------------MGVIRDPSLISNISSSSDYYIQNATPAELMSSLAQDFGAPK----------------NILDLCSSPGGKLILAHDLYPD----AELSANDVSSGKLKPLSENCAKYGISTTLSSVRGEEFPLAQK------------------FDLVILDVPCSNTGVLNKRPEARWRLSQKT-LEQLEEIQLQLLRRGIELL----DKGGELWYLTCSVLKRENGRLIDKVCQELSLET---------RLKEAILPN---ADGWDGGFGCALRK 419          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|1166812056|ref|WP_079979938.1| (hypothetical protein [Neochlamydia sp. S13])

HSP 1 Score: 226.483 bits (576), Expect = 2.746e-63
Identity = 168/554 (30.32%), Postives = 269/554 (48.56%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPG-EGLKGAFDGGFGCALRRK 677
            REAA+ A+L + + ++FI++YL +W ++++PSS +  LA  +A  + + A +LD+   AL  +E     ++ ++LK +++A+LRTAL Q+ +  ++P YAIV++++++AK++     F ++ NA+LRK                                  +  L LP+G    +L+ R S+P + +K L + +G    I I++ASN     MAR R                           + V++  E                W TV   P+ +         + V  S+V  + +  +  +YI N TPA L+  L+QG             S+ P   +LD+CA+PGGK LA+ D       + +L  NDV+  K  ++ +N A++G+  +V  + G+   L KK                  FD++VLDVPCSN+GVL +RPEARWRL +    K+L+  Q +LLKHA   L        EIWY+TCSIL  E+E +V  AC+EL L          +   + +LP  EG    +DGGF C L +K
Sbjct:   32 REAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYL--ALQLSE-----KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHSY-FVAYLNAILRKF--------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLR---------------------------NIVEIPAE----------------WNTVIEEPVKV---------ITVPASEV--KRVASSADYYIQNVTPASLIGNLSQGI------------SKAPT-SILDICASPGGKTLALHDFFP----QAALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDL---------IKKNLISILPNAEG----WDGGFACCLVKK 438          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|742766840|gb|KIC75918.1| (putative ribosomal RNA small subunit methyltransferase B [Neochlamydia sp. EPS4])

HSP 1 Score: 224.557 bits (571), Expect = 2.402e-62
Identity = 167/554 (30.14%), Postives = 268/554 (48.38%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPG-EGLKGAFDGGFGCALRRK 677
            REAA+ A+L + + ++FI++YL +W ++++PSS +  LA  +A  + + A +LD+   AL  +E     ++ ++LK +++A+LRTAL Q+ +  ++P YAIV++++++AK++     F ++ NA+LRK                                  +  L LP+G    +L+ R S+P + +K L + +G      I++ASN     MAR R                           + V++  E                W TV   P+ +         + V  S+V  + +  +  +YI N TPA L+  L+QG             S+ P   +LD+CA+PGGK LA+ D       + +L  NDV+  K  ++ +N A++G+  +V  + G+   L KK                  FD++VLDVPCSN+GVL +RPEARWRL +    K+L+  Q +LLKHA   L        EIWY+TCSIL  E+E +V  AC+EL L          +   + +LP  EG    +DGGF C L +K
Sbjct:   51 REAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYL--ALQLSE-----KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHSY-FVAYLNAILRKF--------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKYYGLQATTKILEASNKPALTMARLR---------------------------NIVEIPAE----------------WSTVIEEPVKV---------ITVPASEV--KRVASSADYYIQNVTPASLIGNLSQGI------------SKAPT-SILDICASPGGKTLALHDFFP----QAALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDL---------IKKNFISILPNAEG----WDGGFACCLVKK 457          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|1169628540|ref|WP_080502662.1| (hypothetical protein [Neochlamydia sp. EPS4])

HSP 1 Score: 223.402 bits (568), Expect = 3.576e-62
Identity = 167/554 (30.14%), Postives = 268/554 (48.38%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPG-EGLKGAFDGGFGCALRRK 677
            REAA+ A+L + + ++FI++YL +W ++++PSS +  LA  +A  + + A +LD+   AL  +E     ++ ++LK +++A+LRTAL Q+ +  ++P YAIV++++++AK++     F ++ NA+LRK                                  +  L LP+G    +L+ R S+P + +K L + +G      I++ASN     MAR R                           + V++  E                W TV   P+ +         + V  S+V  + +  +  +YI N TPA L+  L+QG             S+ P   +LD+CA+PGGK LA+ D       + +L  NDV+  K  ++ +N A++G+  +V  + G+   L KK                  FD++VLDVPCSN+GVL +RPEARWRL +    K+L+  Q +LLKHA   L        EIWY+TCSIL  E+E +V  AC+EL L          +   + +LP  EG    +DGGF C L +K
Sbjct:   32 REAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYL--ALQLSE-----KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHSY-FVAYLNAILRKF--------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKYYGLQATTKILEASNKPALTMARLR---------------------------NIVEIPAE----------------WSTVIEEPVKV---------ITVPASEV--KRVASSADYYIQNVTPASLIGNLSQGI------------SKAPT-SILDICASPGGKTLALHDFFP----QAALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDL---------IKKNFISILPNAEG----WDGGFACCLVKK 438          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|1113245373|gb|OJV11239.1| (hypothetical protein BGO14_09680 [Chlamydiales bacterium 38-26])

HSP 1 Score: 221.861 bits (564), Expect = 6.510e-62
Identity = 169/550 (30.73%), Postives = 262/550 (47.64%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCAL 674
            REAA+LA+L + R + +I+DYL DW  +++P + +  LA  +A  + + A +LDF   AL  +E     ++ V LK +++A+LRTAL Q  +  R+P YAIV++ +++AK Y     F S+ NA+LRK      S+D +                          L LP+ N   +L+ R S+P   V  L+  +G+   + I++ASN    +MAR R P                         S++D                    W ++      +  PLP+     V+   + +  + ++  +YI N TP  L+++L              E+   P   +LD+CAAPGGK LAV D          L  NDV+  K  ++ EN  ++ +   V   +G   +  +K                  FD+++LDVPCSN+GVL +RPEARWRL +    ++LE TQ+ LL+ A+  L  +     +IWY+TCSIL  E+E MVEKAC+ELG + +          R  +LP   L+G +DGGF   L
Sbjct:    4 REAAFLALLHSLRGERYISDYLEDWFIQEKPHAQDYHLAQQIAYGSAQMALALDFL--ALQVSE-----KKKVHLKLKEKALLRTALYQIYFLNRVPHYAIVDETIKVAKNYFHKY-FVSYLNAILRK------SVDIE--------------------------LKLPQQNDASSLSIRYSFPTSYVSELLHHYGEEKTLEILRASNHPAVMMARLRNP-----------------------TESSID--------------------WISI------IKHPLPV-----VIIPPIEMFKIVKSSDFYIQNVTPVQLISQLC-------------EKLTIPPQSILDMCAAPGGKSLAVHDFFP----EAELFANDVSEDKLMKLKENFQKYEIQAHVLCNLGQDIAFEEK------------------FDLIILDVPCSNSGVLNKRPEARWRLNEENS-QQLEKTQWGLLEKAKTLLKPR----GQIWYMTCSILPQENERMVEKACRELGFKELH---------RQLILP--NLEG-WDGGFASCL 407          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|493385299|ref|WP_006341520.1| (hypothetical protein [Parachlamydia acanthamoebae] >gi|281498916|gb|EFB41232.1| hypothetical protein pah_c048o056 [Parachlamydia acanthamoebae str. Hall's coccus] >gi|336478475|emb|CCB85073.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7])

HSP 1 Score: 206.068 bits (523), Expect = 5.740e-56
Identity = 173/551 (31.40%), Postives = 246/551 (44.65%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALR 675
            REAA+LAV +  ++  F+++ L +W +++ PSS +   A  +A  + R A +LD+  ++ A        R+S+ LK ++R++LRTA+ Q  +    PLYAI  ++  LAK+Y     F+SF NALLRKL                               G   P PLPEGNS + L+ R SYP  LV+A + +FG      +++  N   P M R R      P +S    ED++EK     +    +LSP +A                                     +     L + +Q+   YI NGTP  L+  L Q A              +P   +LD+CA+PGGK L   D         +L  NDV+  K   + EN  ++ L+  V L+   G              F  S      FD++++D PCSN GVL +RPEARWR      LK+LE TQ  LL HA   L  K     EIWYLTCSIL  E+E + +K  ++ GL +              +LP        DGGF CALR
Sbjct:    7 REAAFLAVYSFLKEGKFLSESLENWKQKESPSSLDFSFAQDIAYGSVRMALALDYIAKSTAE-------RQSLSLKVKERSLLRTAIYQAAFQRSTPLYAIGQESGNLAKKYCHP-TFSSFLNALLRKL-------------------------------GSGIP-PLPEGNSLQDLSIRYSYPLPLVEAFLDDFGLEKCKQMLELGNHPAPTMVRIR------PHVS--LTEDEKEK-----LTCIPELSPHLAC------------------------------------IKETGTLSIFSQSPHTYIQNGTPYLLMEHLRQSA-------------ENPQ-TILDLCASPGGKLLLAHDFYPS----ATLFANDVSERKLKTLQENCHKYQLN--VSLSCSKG-------------EFFAS---DRRFDLIIVDAPCSNTGVLNKRPEARWRFSPES-LKQLEETQLQLLAHARTLLSDK----GEIWYLTCSILSQENEKLAQKISQKSGLFMRTS---------QTILPN---ALGLDGGFACALR 415          
BLAST of EWM28049.1 vs. NCBI_GenBank
Match: gi|980701345|ref|WP_059360418.1| (hypothetical protein [Parachlamydia acanthamoebae])

HSP 1 Score: 206.068 bits (523), Expect = 5.920e-56
Identity = 171/551 (31.03%), Postives = 245/551 (44.46%), Query Frame = 0
Query:  125 REAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALAGAEDVRGGRRSVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADGDIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVLADSAAEESRDPVLQVLDVCAAPGGKGLAVWDILQGQGRRVSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSVIEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALR 675
            REAA+LAV +  ++  F+++ L +W +++ PSS +   A  +A  + R A +LD+  ++ A        R+S+ LK ++R++LRTA+ Q  +    PLYAI  ++  LAK+Y     F+SF NALLRKL                               G   P PLPEGNS + L+ R SYP  LV+A + +FG      +++  N   P M R R P A          ED++EK     +    +LSP +A                                     +     L + +Q+   YI NGTP  L+  L Q A              +P   +LD+CA+PGGK L   D         +L  NDV+  K   + EN  ++ L+  +  + G+               F  S      FD++++D PCSN GVL +RPEARWR      LK+LE TQ  LL HA   L  K     EIWYLTCSIL  E+E + +K  ++ GL +              +LP        DGGF CALR
Sbjct:    7 REAAFLAVYSFLKEGKFLSESLENWKQKESPSSLDFSFAQDIAYGSVRMALALDYIAKSTAE-------RQSLSLKVKERSLLRTAIYQAAFQRSTPLYAIGQESGNLAKKYCHP-TFSSFLNALLRKL-------------------------------GSGIP-PLPEGNSLQDLSIRYSYPLPLVEAFLDDFGLEKCKQMLELGNHPAPTMVRIR-PHASL-------TEDEKEK-----LTCIPELSPHLAC------------------------------------IKETGTLSIFSQSPHTYIQNGTPYLLMEHLRQSA-------------ENPQ-TILDLCASPGGKLLLAHDFYPS----ATLFANDVSERKLKTLQENCHKYQLNVSLSCSKGE---------------FFAS---DRRFDLIIVDAPCSNTGVLNKRPEARWRFSPES-LKQLEETQLQLLAHARTLLSDK----GEIWYLTCSILSQENEKLAQKISQKSGLFMRTS---------QTILPN---ALGLDGGFACALR 415          
The following BLAST results are available for this feature:
BLAST of EWM28049.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110391|gb|EWM28049.1|0.000e+0100.00sun protein [Nannochloropsis gaditana][more]
gi|742762362|gb|KIC71745.1|1.728e-6430.51putative ribosomal RNA small subunit methyltransfe... [more]
gi|1169628384|ref|WP_080502509.1|1.761e-6430.40hypothetical protein [Neochlamydia sp. TUME1][more]
gi|502946273|ref|WP_013181249.1|1.115e-6331.07ribosomal RNA small subunit methyltransferase B [W... [more]
gi|1166812056|ref|WP_079979938.1|2.746e-6330.32hypothetical protein [Neochlamydia sp. S13][more]
gi|742766840|gb|KIC75918.1|2.402e-6230.14putative ribosomal RNA small subunit methyltransfe... [more]
gi|1169628540|ref|WP_080502662.1|3.576e-6230.14hypothetical protein [Neochlamydia sp. EPS4][more]
gi|1113245373|gb|OJV11239.1|6.510e-6230.73hypothetical protein BGO14_09680 [Chlamydiales bac... [more]
gi|493385299|ref|WP_006341520.1|5.740e-5631.40hypothetical protein [Parachlamydia acanthamoebae]... [more]
gi|980701345|ref|WP_059360418.1|5.920e-5631.03hypothetical protein [Parachlamydia acanthamoebae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2631rna2631Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications