EWM28067.1, cds2613 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|585110409|gb|EWM28067.1| (estradiol 17-beta-dehydrogenase 12 [Nannochloropsis gaditana]) HSP 1 Score: 714.146 bits (1842), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
Query: 1 MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE 345
MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE
Sbjct: 1 MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE 345
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|585110571|gb|EWM28226.1| (estradiol 17-beta-dehydrogenase 12-b [Nannochloropsis gaditana]) HSP 1 Score: 307.76 bits (787), Expect = 8.262e-100 Identity = 158/351 (45.01%), Postives = 223/351 (63.53%), Query Frame = 0
Query: 1 MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRD---PLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESP-AAEIRCMAYDYTDREGAEAFFMKLSETCK--HLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE 345
M LDVKEK L+ FIAK P++++ F +Y +W P LG A+ +T + + +L +L R P YGKWAIVTGAT+GIGEAFA+ELA GM+V+IISR+ KLE+ K IL+ +P E+ +A+D+T A+AF+++L E H GG+G+L+NNVG +PE++H L + I++VNVEGTVR TR + P + D+R GAIINVSSGSGNHPTP++S YA+TK+FI +FS+ L +E + G+DVLV TPYYV + K + ++ R VQDTL +LG D +PY HA+ G + YW ++ +M + R R L AK++ +KE
Sbjct: 1 MGLDVKEKALLTFIAKVTFPLVVVMGPFIAYTRIWEHPFWFLGLVTFAV----LTTKALYYLLERLTRRRKDLPREYGKWAIVTGATSGIGEAFAHELAQRGMSVLIISRTPAKLEKTKADILRNAPEGVEVEVLAFDFTCMPKADAFYLRLREVAASLHKRGGIGMLINNVGTNVEVPEFLHALPESEVLDIVRVNVEGTVRMTRTVLPFMADRRAGAIINVSSGSGNHPTPLLSTYAATKAFINEFSRSLHYEAKHVGIDVLVATPYYVSTPGMYNKPPGLLNCSSHRFVQDTLNVLGRYDSVYPYIAHAILGTLMDKYWATPAALFKSMNKTRMRAL---AKRQQQKE 344
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|1022772073|gb|KZS16268.1| (Very-long-chain 3-oxoacyl-CoA reductase [Daphnia magna]) HSP 1 Score: 181.03 bits (458), Expect = 6.405e-51 Identity = 104/285 (36.49%), Postives = 160/285 (56.14%), Query Frame = 0
Query: 39 VRLLGFCLVAIWIIKITRRVILFLRVKLFPR------DPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPE-YVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYW 316
+ +LGF + I+K + F+ V R + G WA+VTGAT GIG+++A LAA G+NV+++SR+ KLE+V I E + EI+ +A D+TD + + KL LE +GIL+NNVG+ E + + D+ + I+ N+ VR +R + P +I ++KG I+N+ S SG TP+ + Y +TK F+ +FS+ LS E+RE GV V V P +V++N + ++AT+ APT R V L LG D +WFH+ + LYW
Sbjct: 4 LEILGFVTALVLILKSVYNLSHFVYVNFLGRLLGHGLNISKCGPWAVVTGATDGIGKSYARLLAAEGLNVVLVSRTPAKLEKVADEIKNEYGSIEIKTIAVDFTD---GNSIYSKLEAELSQLE--IGILINNVGIAVGFAERFADIADEKSLNDIINCNILSMVRMSRLVLPQMIKRKKGVIVNIGSISGAFATPLATIYGATKGFVDKFSRDLSSEVRESGVIVQTVHPGFVVTNMSKLRRATWKAPTPDRFVAAALSTLGLTDRTSGFWFHS-----IQLYW 278
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|223546077|gb|EEF47580.1| (steroid dehydrogenase, putative [Ricinus communis]) HSP 1 Score: 179.489 bits (454), Expect = 4.234e-50 Identity = 105/304 (34.54%), Postives = 171/304 (56.25%), Query Frame = 0
Query: 20 PILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRD-PLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGL 314
P+ L+ SF ++ L+ LL W+ K R P++ +YG WA++TGAT GIG+AFA++LA G+N+I++SR+LNKL+ V I +E P+ +I+ M D++ E + + E K ++ +G+L+NNVG+ + +D+ T +++VNV+GT R T A+ +I++R+GAI+N+ SG+ +H P+ + YA+TK++I Q S+CL E R G+DV P YV +N R +K++ P+ Q + + +GY PYW H+L FFV L
Sbjct: 12 PLWLLIVSFLGFLSLFNYSFTLLN------WVYKTVLRQ---------PKNLKENYGSWALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS-EDSSGLVHVIEEAIKGVD--VGVLINNVGITYPQARFFDEVDESTWMSVVKVNVKGTTRVTEAVLSGMIERRRGAIVNIGSGASIVVPSH--PLYTIYAATKAYIDQLSRCLYVEYRSCGIDVQCQVPLYVATNMTSRVALIEKSSLFIPSPQAYAEAAIRCIGYEARCTPYWAHSLQWFFVRL 295
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|1000975407|ref|XP_002515026.2| (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Ricinus communis]) HSP 1 Score: 179.489 bits (454), Expect = 4.617e-50 Identity = 105/304 (34.54%), Postives = 171/304 (56.25%), Query Frame = 0
Query: 20 PILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRD-PLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGL 314
P+ L+ SF ++ L+ LL W+ K R P++ +YG WA++TGAT GIG+AFA++LA G+N+I++SR+LNKL+ V I +E P+ +I+ M D++ E + + E K ++ +G+L+NNVG+ + +D+ T +++VNV+GT R T A+ +I++R+GAI+N+ SG+ +H P+ + YA+TK++I Q S+CL E R G+DV P YV +N R +K++ P+ Q + + +GY PYW H+L FFV L
Sbjct: 19 PLWLLIVSFLGFLSLFNYSFTLLN------WVYKTVLRQ---------PKNLKENYGSWALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS-EDSSGLVHVIEEAIKGVD--VGVLINNVGITYPQARFFDEVDESTWMSVVKVNVKGTTRVTEAVLSGMIERRRGAIVNIGSGASIVVPSH--PLYTIYAATKAYIDQLSRCLYVEYRSCGIDVQCQVPLYVATNMTSRVALIEKSSLFIPSPQAYAEAAIRCIGYEARCTPYWAHSLQWFFVRL 302
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|470148953|ref|XP_004310011.1| (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Fragaria vesca subsp. vesca]) HSP 1 Score: 176.407 bits (446), Expect = 4.825e-49 Identity = 110/318 (34.59%), Postives = 178/318 (55.97%), Query Frame = 0
Query: 26 CSFASYME----LWAQPVRLLGFCLVAIWIIKITRRV-ILFLRVKLFPRDPL--SYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKL-SETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMR 327
C+ Y+ +W + LGF + I + R + I FLR P L SYG W ++TGAT GIG+AFAY+LA G+N++++SRS NKLE V K I P +I+ +A+D++ EG +KL E K L+ +GIL+NNVG+ Y H +D+ I++VN+EGT R T A+ P ++ +++GAI+N+ SG+ +H P+ + YA+TK+++ + S L E +E+G+DV + P YV + + ++++ P+A + + +GY P+W H+L +F L V S++ A R
Sbjct: 9 CNIHEYLTNQQPVWLLLLSSLGFFIFLKHSISLARWLFITFLR----PAKDLERSYGSWGLITGATDGIGKAFAYQLAKKGLNLVLVSRSSNKLESVSKEIQSHFPDVKIKTVAFDFSSDEG----LVKLVEEKIKGLD--VGILINNVGVTYPAASYFHEVDEKVWMNIIRVNLEGTTRVTMAVVPGMLQRKRGAIVNLGSGAAVVVPSH--PLYTIYAATKAYVDKLSTSLYMEYKEYGIDVQIQVPLYVATKMVSKVAAIERSSLFIPSADAYAEAAVKRIGYEARCTPFWAHSLQWWFARL---VPDSLLDAWR 311
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|1000975428|ref|XP_015572179.1| (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Ricinus communis]) HSP 1 Score: 176.022 bits (445), Expect = 9.097e-49 Identity = 104/300 (34.67%), Postives = 167/300 (55.67%), Query Frame = 0
Query: 20 PILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFF 311
P+ L SF ++ L LL W+ K R L+ +YG WA++TGAT GIG+AFA++LA G+N+I++SR+LNKL+ V I +E P+ +I+ M D++ E + + E K ++ +G+L+NNVG+ + +D+ T I++VNVEGT R T A+ P +I++R+GAI+N+ SG+ +H P+ + YA+TK++I + S+CL E + G+DV P YV +N R +K++ P+ Q + + +GY PYW H+L FF
Sbjct: 12 PLWLPIVSFLGFLSLLNYSFTLLN------WVYKTVLRQPKNLKE--------NYGSWALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS-EDSSGLVHVIEEAIKGVD--VGVLINNVGITYPRARFFDEVDESTWMSIVKVNVEGTTRVTEAVLPGMIERRRGAIVNIGSGASIVVPSH--PLYTIYAATKAYIDRLSRCLYVEYKSCGIDVQCQVPLYVATNMTSRVALIEKSSLFIPSPQAYAEAAVRRIGYEARCTPYWAHSLQWFF 292
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|460386970|ref|XP_004239165.1| (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 isoform X1 [Solanum lycopersicum]) HSP 1 Score: 174.866 bits (442), Expect = 1.767e-48 Identity = 102/306 (33.33%), Postives = 175/306 (57.19%), Query Frame = 0
Query: 20 PILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPL-SYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYT-DREGAEAFFMKLSETCKHLEG-GLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGL 314
P+ ++ SF ++ L F + WI I FLR P++ + SYG WA++TG+T GIG+AFA++LA G+N+I+++R+LNKL++V I ++P +++ + D++ D + E K +EG +G+L+NNVG+ + H +D+ I++VN+EGT T A+ P +I ++KGAI+N+ SG+ +H P+ S YA+TK++I QFS+CL E ++ G+DV P YV + R +K++ +PT ++ + + +GY + PYW H++ +F L
Sbjct: 13 PLFVLLLSFIGFITF------LKNFIIFLKWIF------ITFLRT---PKNLVQSYGSWALITGSTDGIGKAFAFQLAQKGLNLILVARNLNKLQQVSSEIKTQNPNIKVKIIVVDFSFDVTKG------IQEMKKGIEGLDIGVLINNVGVTYPRAMFFHEVDENIWKNIVKVNLEGTTLVTAAVLPSMIGRKKGAIVNIGSGASIVVPSH--PLFSIYAATKAYIDQFSRCLYDEYKQHGIDVQCQVPLYVKTKMTSRVASIEKSSLFSPTPEKYAKAGVAQIGYGWRSMPYWPHSIQWWFASL 295
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|729352466|ref|XP_010543930.1| (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Tarenaya hassleriana]) HSP 1 Score: 174.866 bits (442), Expect = 1.832e-48 Identity = 98/281 (34.88%), Postives = 163/281 (58.01%), Query Frame = 0
Query: 45 CLVA-IWIIKITRRVI--LFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSG----NHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGL 314
CL+ + ++K++ R+ +F R L P+ SYG WA+VTGATAGIG AFA+ELA G+N+I++SR+ KLE V + +E P +I+ + +D++ E + + E K ++ +GIL+NNVG+ + H +++ T I++VNVEGT TR + ++ +R+GAI+N+SSG+G +H P+ + YA+TK +I S+CL E ++FG+DV P YV + + + P+ + + + ++G P+W H+L F V L
Sbjct: 21 CLIGFVSLLKLSSRLFDWVFTRFVLHPKPLKSYGSWALVTGATAGIGRAFAHELAKHGLNLILVSRNPTKLESVAQQFHQEFPNTKIKIIPFDFSSEEEPSTRYKAIEEAIKGVD--VGILINNVGITYPKAMFFHEVEEETWKEIIRVNVEGTTWVTRHVIGGMLQRRRGAIVNISSGAGVVVSSH--PLYAIYAATKCYIDTLSKCLHVEYKQFGIDVHCQVPLYVATGMVSKVANVDGPSLFTPSPEMYAKAAIGMIGIRPRCSPFWAHSLQWFLVQL 297
BLAST of EWM28067.1 vs. NCBI_GenBank
Match: gi|403254622|ref|XP_003920061.1| (PREDICTED: estradiol 17-beta-dehydrogenase 12 [Saimiri boliviensis boliviensis]) HSP 1 Score: 173.711 bits (439), Expect = 3.650e-48 Identity = 102/271 (37.64%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 75 GKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQ----VNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLY--WDVGGSVMAAMRRNRARILEAAAK 339
G+WA+VTG+T GIG+++A ELA GM V++ISRS +KL++V I KE E R +A D+ +E + K+ LE +G+LVNNVGM PE H LD P +++ +N+ + TR + P +I++ KGAI+N+SS SG+HP PM++ Y++TK+F+ FS+CL E R GV V V PY+V + + +K T P+++ V+ + +G Y HAL G + + W VM + RAR L+ K
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKRGMKVVLISRSQDKLDQVSSEI-KEKFKVETRTIAVDF----ASEDIYDKIETGLAGLE--IGVLVNNVGMSYEYPE--HFLDVPDLDNVIKKMININILSVCKMTRLVLPGMIERSKGAILNISSASGSHPVPMLTIYSATKTFVDFFSRCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDTPSSETFVKSAIKTVGLQSRTNGYLIHALMGSIISVLPSWIYFKFVMDINKSTRARFLKKIKK 311 The following BLAST results are available for this feature:
BLAST of EWM28067.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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