EWM28048.1, cds2600 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|585110390|gb|EWM28048.1| (dna repair enzyme [Nannochloropsis gaditana]) HSP 1 Score: 1688.7 bits (4372), Expect = 0.000e+0 Identity = 836/836 (100.00%), Postives = 836/836 (100.00%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRDDEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQLKKQHILSGSTVLTGASGKNKKQKADLEPVGSLGAEAGFAAGFIPGAPEKAWDPPDAEVAGREEFVAGDGSQDARKGAEKVDGHGINGDGGSIRQRSAAAAFAQALPAAASDEEEEVEWEEEEDSGTDDVGDILLEDDNVDVMVLASLPPELQKDVVESAKRRQRMLSRQAFMPVAGNPALYSQAQISNFLKSSRLNQKVSSLREVLGDDGNRDEGGIGAGGKDQPESSAGSGTWQGTEEYEDMSRDLDDEAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPGGSIALEKEENTESGQEGAETMEIENARKNRKGSRQGGNARLCEGTNADVNRKEAQRTKALSPSKKMRRVQKRKKSLGQCSSSSGGSSSDEGEEREEGSVKGNGRGIAEADTRVPARLRGRRGGRGRKVVILDDEEASGSEHMAEE 836
MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRDDEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQLKKQHILSGSTVLTGASGKNKKQKADLEPVGSLGAEAGFAAGFIPGAPEKAWDPPDAEVAGREEFVAGDGSQDARKGAEKVDGHGINGDGGSIRQRSAAAAFAQALPAAASDEEEEVEWEEEEDSGTDDVGDILLEDDNVDVMVLASLPPELQKDVVESAKRRQRMLSRQAFMPVAGNPALYSQAQISNFLKSSRLNQKVSSLREVLGDDGNRDEGGIGAGGKDQPESSAGSGTWQGTEEYEDMSRDLDDEAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPGGSIALEKEENTESGQEGAETMEIENARKNRKGSRQGGNARLCEGTNADVNRKEAQRTKALSPSKKMRRVQKRKKSLGQCSSSSGGSSSDEGEEREEGSVKGNGRGIAEADTRVPARLRGRRGGRGRKVVILDDEEASGSEHMAEE
Sbjct: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRDDEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQLKKQHILSGSTVLTGASGKNKKQKADLEPVGSLGAEAGFAAGFIPGAPEKAWDPPDAEVAGREEFVAGDGSQDARKGAEKVDGHGINGDGGSIRQRSAAAAFAQALPAAASDEEEEVEWEEEEDSGTDDVGDILLEDDNVDVMVLASLPPELQKDVVESAKRRQRMLSRQAFMPVAGNPALYSQAQISNFLKSSRLNQKVSSLREVLGDDGNRDEGGIGAGGKDQPESSAGSGTWQGTEEYEDMSRDLDDEAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPGGSIALEKEENTESGQEGAETMEIENARKNRKGSRQGGNARLCEGTNADVNRKEAQRTKALSPSKKMRRVQKRKKSLGQCSSSSGGSSSDEGEEREEGSVKGNGRGIAEADTRVPARLRGRRGGRGRKVVILDDEEASGSEHMAEE 836
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|298711922|emb|CBJ48609.1| (DNA repair enzyme [Ectocarpus siliculosus]) HSP 1 Score: 313.153 bits (801), Expect = 1.005e-86 Identity = 162/322 (50.31%), Postives = 208/322 (64.60%), Query Frame = 0
Query: 373 KELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQE-TVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPGGS 693
K RDAETV++EM+E++M LL+LFGVPY+VAPMEAEAQC VLE L LVDG V+DDSD+F FG RAVYKNIF +RK+VEAY D E++LG+ ++V+LALLLGSDYTEGV+GVGIVNAMEV+ AF EG+G GL FK W+DGFDPL D L K +E D ++ E++ FH KH++AR RW V + FP + AY PQV+ S + F+W PD+DGL + LGW ++D L+PM++ + + QSR+D YF+ Y DN + A IKSKRL+ AV DL G S
Sbjct: 1292 KAQRDAETVTEEMKEEVMDLLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSDRKFVEAYLLPDAEKDLGVGTDEVVALALLLGSDYTEGVRGVGIVNAMEVINAFP--LEGKGA--------HHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEID------------------GLSLEMK-FHLKHRTARNRWTVPDGFPSEEVINAYNNPQVDRSEEPFSWAAPDVDGLMALCQRVLGWDRDQSDGLLMPMVKELDRGSFAQSRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSS 1584 HSP 2 Score: 187.193 bits (474), Expect = 4.484e-45 Identity = 84/118 (71.19%), Postives = 102/118 (86.44%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRDDEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKR-RREDQETSVRKTAQRLLLAQLKKQ 117
MG+ NLWQLL PVGR V++E+L KTLA+DVSIWLTQFIKAMRDD+GKVVKNAHIIGT RR+VKLLF+RIRP+FVFDGG P +K RT+ +R++ R E ++SVRKTAQR+L +QLKK
Sbjct: 1 MGIKNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKARTLAARRKLRSEGTDSSVRKTAQRILASQLKKH 118 HSP 3 Score: 88.9669 bits (219), Expect = 2.824e-14 Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0
Query: 250 DDNVDVMVLASLPPELQKDVVESAKRRQRMLSRQAFMPVAGNPALYSQAQISNFLKSSRLNQKVSSLREVLGDDGNR 326
++++D V+ASLP ++K V+E+AKRRQRM SR +MPVAGNPA+YSQ Q+SNFL+S++LN ++ L+ DD +R
Sbjct: 304 NEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRSNKLNAQI--LKAQKQDDSDR 378
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|1072233097|gb|OEU17828.1| (XPG_I-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 285.419 bits (729), Expect = 2.494e-86 Identity = 144/302 (47.68%), Postives = 201/302 (66.56%), Query Frame = 0
Query: 385 MREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQE-TVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAV 685
M+ ++M LL+LFG+PY+VAP EAEAQC LE LGLVDG+VS+DSD+F+FG + VYKNIFD++KYVE Y A+D E E+ L +V+LA+LLG DYTEGVKGVGIVN MEV++AF G + GLQ F+ WLDGFDP DLS + K A ++GG V + + FH KH +ARTRW+ ++ FPD + AYL+P V+ S + FT+G+PDLDGL + +GW ET+ ++P++++M+E ++ Q+R+DS F+ Y+D +KFA I+SKRL+ +
Sbjct: 1 MKTEVMQLLRLFGIPYVVAPAEAEAQCVELEKLGLVDGIVSEDSDTFVFGGQKVYKNIFDDKKYVEVYNAKDAEEEMNLSHDSMVALAMLLGGDYTEGVKGVGIVNGMEVLQAFDV-----------GQDCKAGLQRFRHWLDGFDP-NDLSKHSKNK----------KKAAADDGG-----VVVVLNKEQIFHKKHHTARTRWIASKNFPDAKVLNAYLKPVVDTSDERFTFGIPDLDGLVDFCYKHMGWSADETNRAVVPVIQKMEESSLRQTRIDS-FMRYEDGIKFANIRSKRLRNVL 274
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|698793890|ref|XP_009829974.1| (hypothetical protein, variant 4 [Aphanomyces astaci] >gi|574114563|gb|ETV80050.1| hypothetical protein, variant 4 [Aphanomyces astaci]) HSP 1 Score: 289.271 bits (739), Expect = 1.489e-81 Identity = 151/327 (46.18%), Postives = 202/327 (61.77%), Query Frame = 0
Query: 364 EAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLK 689
EA LR ++LRD + V+ EM+ +M LL+LFGVP++V PMEAEAQCA LE LGLV G+++DDSD F FG + VYKN+F + K+VEAY A DLERELGL + +++LALLLGSDYT+G+ G+GIVNA E+V AF GG EGL+HF W++ FD + DD ++ + V S AA +E F H+S R W V+ FP+P + +AY P + ST F+W VPDL LRV Q+ GWP+ DS LLP++R + Q+R+D YF Y DN+K+AKI+SKRL+ V D+K
Sbjct: 536 EADLRKLRNQKLRDVDGVTDEMKSQVMDLLRLFGVPFVVCPMEAEAQCATLEQLGLVQGIITDDSDIFAFGGKKVYKNMFKDSKFVEAYFAADLERELGLDQERMIALALLLGSDYTDGINGIGIVNAAEIVGAF-------------GGL--EGLRHFGTWVNSFD------------ITDDLKKPKKV--------SADELAA--LSPLERFKLTHQSIRRNWNVSAIFPNPHVIKAYQYPDTDKSTARFSWSVPDLANLRVFCGQEFGWPIDTVDSKLLPVVRAVSRGFQAQTRIDGYFTSYNDNIKYAKIRSKRLKAVVNDIK 825 HSP 2 Score: 142.124 bits (357), Expect = 4.578e-31 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRD-DEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQ 113
MGV LW LL P GR+V++ESL +TLA+D SIWLTQF+KAMRD D+G +++NAH++GTF RI KLL + IRP+FVFDG TP IK +T+ R+ RRE + ++ +TA++LL+ Q
Sbjct: 1 MGVTGLWMLLAPGGRQVSMESLSGQTLAVDASIWLTQFVKAMRDPDDGTMMRNAHLLGTFYRISKLLTHGIRPVFVFDGDTPAIKLKTLQQRRSRREKSQDTLTQTAKKLLIKQ 114
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|698793884|ref|XP_009829971.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574114560|gb|ETV80047.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 289.271 bits (739), Expect = 1.826e-81 Identity = 151/327 (46.18%), Postives = 202/327 (61.77%), Query Frame = 0
Query: 364 EAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLK 689
EA LR ++LRD + V+ EM+ +M LL+LFGVP++V PMEAEAQCA LE LGLV G+++DDSD F FG + VYKN+F + K+VEAY A DLERELGL + +++LALLLGSDYT+G+ G+GIVNA E+V AF GG EGL+HF W++ FD + DD ++ + V S AA +E F H+S R W V+ FP+P + +AY P + ST F+W VPDL LRV Q+ GWP+ DS LLP++R + Q+R+D YF Y DN+K+AKI+SKRL+ V D+K
Sbjct: 552 EADLRKLRNQKLRDVDGVTDEMKSQVMDLLRLFGVPFVVCPMEAEAQCATLEQLGLVQGIITDDSDIFAFGGKKVYKNMFKDSKFVEAYFAADLERELGLDQERMIALALLLGSDYTDGINGIGIVNAAEIVGAF-------------GGL--EGLRHFGTWVNSFD------------ITDDLKKPKKV--------SADELAA--LSPLERFKLTHQSIRRNWNVSAIFPNPHVIKAYQYPDTDKSTARFSWSVPDLANLRVFCGQEFGWPIDTVDSKLLPVVRAVSRGFQAQTRIDGYFTSYNDNIKYAKIRSKRLKAVVNDIK 841 HSP 2 Score: 142.124 bits (357), Expect = 4.161e-31 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRD-DEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQ 113
MGV LW LL P GR+V++ESL +TLA+D SIWLTQF+KAMRD D+G +++NAH++GTF RI KLL + IRP+FVFDG TP IK +T+ R+ RRE + ++ +TA++LL+ Q
Sbjct: 1 MGVTGLWMLLAPGGRQVSMESLSGQTLAVDASIWLTQFVKAMRDPDDGTMMRNAHLLGTFYRISKLLTHGIRPVFVFDGDTPAIKLKTLQQRRSRREKSQDTLTQTAKKLLIKQ 114
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|698793888|ref|XP_009829973.1| (hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574114562|gb|ETV80049.1| hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 288.886 bits (738), Expect = 1.915e-81 Identity = 151/327 (46.18%), Postives = 202/327 (61.77%), Query Frame = 0
Query: 364 EAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLK 689
EA LR ++LRD + V+ EM+ +M LL+LFGVP++V PMEAEAQCA LE LGLV G+++DDSD F FG + VYKN+F + K+VEAY A DLERELGL + +++LALLLGSDYT+G+ G+GIVNA E+V AF GG EGL+HF W++ FD + DD ++ + V S AA +E F H+S R W V+ FP+P + +AY P + ST F+W VPDL LRV Q+ GWP+ DS LLP++R + Q+R+D YF Y DN+K+AKI+SKRL+ V D+K
Sbjct: 536 EADLRKLRNQKLRDVDGVTDEMKSQVMDLLRLFGVPFVVCPMEAEAQCATLEQLGLVQGIITDDSDIFAFGGKKVYKNMFKDSKFVEAYFAADLERELGLDQERMIALALLLGSDYTDGINGIGIVNAAEIVGAF-------------GGL--EGLRHFGTWVNSFD------------ITDDLKKPKKV--------SADELAA--LSPLERFKLTHQSIRRNWNVSAIFPNPHVIKAYQYPDTDKSTARFSWSVPDLANLRVFCGQEFGWPIDTVDSKLLPVVRAVSRGFQAQTRIDGYFTSYNDNIKYAKIRSKRLKAVVNDIK 825 HSP 2 Score: 142.124 bits (357), Expect = 4.882e-31 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRD-DEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQ 113
MGV LW LL P GR+V++ESL +TLA+D SIWLTQF+KAMRD D+G +++NAH++GTF RI KLL + IRP+FVFDG TP IK +T+ R+ RRE + ++ +TA++LL+ Q
Sbjct: 1 MGVTGLWMLLAPGGRQVSMESLSGQTLAVDASIWLTQFVKAMRDPDDGTMMRNAHLLGTFYRISKLLTHGIRPVFVFDGDTPAIKLKTLQQRRSRREKSQDTLTQTAKKLLIKQ 114
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|698793886|ref|XP_009829972.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574114561|gb|ETV80048.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 289.271 bits (739), Expect = 2.110e-81 Identity = 151/327 (46.18%), Postives = 202/327 (61.77%), Query Frame = 0
Query: 364 EAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLK 689
EA LR ++LRD + V+ EM+ +M LL+LFGVP++V PMEAEAQCA LE LGLV G+++DDSD F FG + VYKN+F + K+VEAY A DLERELGL + +++LALLLGSDYT+G+ G+GIVNA E+V AF GG EGL+HF W++ FD + DD ++ + V S AA +E F H+S R W V+ FP+P + +AY P + ST F+W VPDL LRV Q+ GWP+ DS LLP++R + Q+R+D YF Y DN+K+AKI+SKRL+ V D+K
Sbjct: 552 EADLRKLRNQKLRDVDGVTDEMKSQVMDLLRLFGVPFVVCPMEAEAQCATLEQLGLVQGIITDDSDIFAFGGKKVYKNMFKDSKFVEAYFAADLERELGLDQERMIALALLLGSDYTDGINGIGIVNAAEIVGAF-------------GGL--EGLRHFGTWVNSFD------------ITDDLKKPKKV--------SADELAA--LSPLERFKLTHQSIRRNWNVSAIFPNPHVIKAYQYPDTDKSTARFSWSVPDLANLRVFCGQEFGWPIDTVDSKLLPVVRAVSRGFQAQTRIDGYFTSYNDNIKYAKIRSKRLKAVVNDIK 841 HSP 2 Score: 142.124 bits (357), Expect = 4.818e-31 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRD-DEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQ 113
MGV LW LL P GR+V++ESL +TLA+D SIWLTQF+KAMRD D+G +++NAH++GTF RI KLL + IRP+FVFDG TP IK +T+ R+ RRE + ++ +TA++LL+ Q
Sbjct: 1 MGVTGLWMLLAPGGRQVSMESLSGQTLAVDASIWLTQFVKAMRDPDDGTMMRNAHLLGTFYRISKLLTHGIRPVFVFDGDTPAIKLKTLQQRRSRREKSQDTLTQTAKKLLIKQ 114
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|698793882|ref|XP_009829970.1| (hypothetical protein H257_06457 [Aphanomyces astaci] >gi|574114559|gb|ETV80046.1| hypothetical protein H257_06457 [Aphanomyces astaci]) HSP 1 Score: 289.271 bits (739), Expect = 2.364e-81 Identity = 151/327 (46.18%), Postives = 202/327 (61.77%), Query Frame = 0
Query: 364 EAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLK 689
EA LR ++LRD + V+ EM+ +M LL+LFGVP++V PMEAEAQCA LE LGLV G+++DDSD F FG + VYKN+F + K+VEAY A DLERELGL + +++LALLLGSDYT+G+ G+GIVNA E+V AF GG EGL+HF W++ FD + DD ++ + V S AA +E F H+S R W V+ FP+P + +AY P + ST F+W VPDL LRV Q+ GWP+ DS LLP++R + Q+R+D YF Y DN+K+AKI+SKRL+ V D+K
Sbjct: 555 EADLRKLRNQKLRDVDGVTDEMKSQVMDLLRLFGVPFVVCPMEAEAQCATLEQLGLVQGIITDDSDIFAFGGKKVYKNMFKDSKFVEAYFAADLERELGLDQERMIALALLLGSDYTDGINGIGIVNAAEIVGAF-------------GGL--EGLRHFGTWVNSFD------------ITDDLKKPKKV--------SADELAA--LSPLERFKLTHQSIRRNWNVSAIFPNPHVIKAYQYPDTDKSTARFSWSVPDLANLRVFCGQEFGWPIDTVDSKLLPVVRAVSRGFQAQTRIDGYFTSYNDNIKYAKIRSKRLKAVVNDIK 844 HSP 2 Score: 142.124 bits (357), Expect = 4.728e-31 Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 1 MGVHNLWQLLLPVGRRVNVESLERKTLAIDVSIWLTQFIKAMRD-DEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKRRREDQETSVRKTAQRLLLAQ 113
MGV LW LL P GR+V++ESL +TLA+D SIWLTQF+KAMRD D+G +++NAH++GTF RI KLL + IRP+FVFDG TP IK +T+ R+ RRE + ++ +TA++LL+ Q
Sbjct: 1 MGVTGLWMLLAPGGRQVSMESLSGQTLAVDASIWLTQFVKAMRDPDDGTMMRNAHLLGTFYRISKLLTHGIRPVFVFDGDTPAIKLKTLQQRRSRREKSQDTLTQTAKKLLIKQ 114
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|1173951546|gb|OQR99409.1| (DNA repair protein, partial [Thraustotheca clavata]) HSP 1 Score: 269.24 bits (687), Expect = 1.349e-79 Identity = 142/327 (43.43%), Postives = 198/327 (60.55%), Query Frame = 0
Query: 363 DEAALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPML----RRMQETVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAV 685
DE LR+R +++RD+E V+++M+ ++M LL+LFGVP++VAPMEAEAQCA LE LGLV+GV++DDSD F FG + VYKN+F K+VEA+ D+ RELGL + +++LALLLGSDYT+G+ GVGIVNA E+V AF +GL FKAW++ FD L +A D E D +E F H R W + + FP+ + +AYL+P+ + S F+W PDL LRV + GWP+ + ++ LLP++ R ET Q+R+DSYF Y+D+VK+AKI+SKRLQ V
Sbjct: 24 DEQLLRAR-NQQMRDSEGVTEDMKNEVMDLLRLFGVPFIVAPMEAEAQCATLEQLGLVNGVITDDSDIFAFGGKKVYKNMFKTTKFVEAFYMNDIGRELGLDQESMIALALLLGSDYTDGIHGVGIVNATEIVHAFPGI---------------DGLHQFKAWVNEFDLAAQLKPQAKLSESDLAEMD----------------------PLERFKHTHHKVRRNWTIGDAFPNFHVVKAYLEPETDRSDARFSWATPDLANLRVFCGRAFGWPLEKVNTTLLPIVQAATRGWFET--QTRIDSYFTSYKDDVKYAKIRSKRLQAVV 310
BLAST of EWM28048.1 vs. NCBI_GenBank
Match: gi|727498989|ref|XP_010425586.1| (PREDICTED: DNA repair protein UVH3-like isoform X3 [Camelina sativa]) HSP 1 Score: 286.574 bits (732), Expect = 2.155e-78 Identity = 170/419 (40.57%), Postives = 237/419 (56.56%), Query Frame = 0
Query: 359 RDLDDE-AALRSRMRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEE-GLQHFKAWLDGFDP--LGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVWQSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPGGSIALEKEENTESGQEGAETMEIENARKNRKGSRQGGNARLCEGTNADVNRKEAQRTKALSPSKKMRRVQKRKKSLGQCSSS 773
R LD E +L RK R+AE+VS EM D LLQ+FG+PY++APMEAEAQCA +E L LVDG+V+DDSD FLFGAR+VYKNIFD+RKYVE Y +D+E+ELGL R ++ +A+LLGSDYTEG+ G+GIVNA+EVV AF PEE GLQ F+ W++ DP LG + K+ + +VD G++ + Q F KH+ W + FP A+ AYL PQV+ ST+ F+WG PDL LR +K GW +TD LLP+L+ ++ Q R++++ Y N +FAKI+SKR+ +AV + GG + S + + T++ +G R+ RL D+N + KA +V+ ++K L + SSS
Sbjct: 633 RVLDQEFVSLGDEQRKLERNAESVSSEMFADCQELLQIFGIPYIIAPMEAEAQCAFMEQLNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYLMKDIEKELGLTRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAF----------------PEEDGLQKFREWVESPDPTILGKADAKTGSKV--KKHGSGSVDNKDVIAGASTDDTEEIKQ---IFMDKHRKVSKNWNIPSTFPSEAVISAYLNPQVDRSTEGFSWGKPDLSVLRKLCWEKFGWNGKKTDDLLLPVLKEYEKRETQLRIEAF---YSFNERFAKIRSKRINKAVKGI--GGGL---------SSEVASHTLQ--------EGPRKRNKKRLAPQETEDINTSDKDSPKA------NEKVKNKRKCLEKPSSS 1002 The following BLAST results are available for this feature:
BLAST of EWM28048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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