EWM30647.1, cds26 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|585113339|gb|EWM30647.1| (der1-like domain member 2 [Nannochloropsis gaditana]) HSP 1 Score: 879.782 bits (2272), Expect = 0.000e+0 Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0
Query: 1 MRNIGNILMPFDEPLKSTFVPHMDTQLQTIPPSWSSAVGLVSLSINMRTNALRAAGYKHGDRRPKVFSSVLSLLFFASVATAVAHNLPVACRWMRGVTINREATKEILPFMSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHFRKLYRSFEDDLH 425
MRNIGNILMPFDEPLKSTFVPHMDTQLQTIPPSWSSAVGLVSLSINMRTNALRAAGYKHGDRRPKVFSSVLSLLFFASVATAVAHNLPVACRWMRGVTINREATKEILPFMSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHFRKLYRSFEDDLH
Sbjct: 1 MRNIGNILMPFDEPLKSTFVPHMDTQLQTIPPSWSSAVGLVSLSINMRTNALRAAGYKHGDRRPKVFSSVLSLLFFASVATAVAHNLPVACRWMRGVTINREATKEILPFMSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHFRKLYRSFEDDLH 425
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|553187251|ref|XP_005854572.1| (degradation in endoplasmic reticulum der1-like protein [Nannochloropsis gaditana CCMP526] >gi|422294488|gb|EKU21788.1| degradation in endoplasmic reticulum der1-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 296.975 bits (759), Expect = 3.255e-97 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 111 MSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQI 259
MSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQ+
Sbjct: 1 MSRREGVSLALCSLIRSRGGARAASAAKDKHRLHNDRANDNVVEEEKAENEEEEEEEEEEEEEEEEEEEEEDAEEDEDDYDEEGVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQV 149
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|676388651|ref|XP_009037604.1| (hypothetical protein AURANDRAFT_71775 [Aureococcus anophagefferens] >gi|323451730|gb|EGB07606.1| hypothetical protein AURANDRAFT_71775 [Aureococcus anophagefferens]) HSP 1 Score: 230.72 bits (587), Expect = 4.377e-69 Identity = 113/223 (50.67%), Postives = 155/223 (69.51%), Query Frame = 0
Query: 190 YDEE-GVTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQK 411
+DE+ +++ DF+ +F S+ K + TPP+T+AY+ ASL++T + L NQWPEWL L+W V R Q+WRP T+FL++G FG +YLL+ HF+WTYM LEKL P +F+ M+ FG LL+G L G + HFLGHNLSC+LVY+W+R +EGQ+V VM F++ A +LPWFF AQT +LE ELP+ DLLGIA+GHLY A RK++ P L+ F
Sbjct: 82 FDEDVEISDADFDGDTFKSRTLKSWAETPPMTQAYVGASLALTCGSFLAFNNQWPEWLHLNWGAVFKRAQVWRPLTAFLFYGPFGLSYLLTIHFVWTYMGTLEKLSHTEPWEFLVMMAFGAGSLLLGVGLGGMKTHFLGHNLSCFLVYIWARTYEGQEVSVMEFFNIKAELLPWFFAAQTYLLEHELPIHDLLGIAIGHLYTVARQRKILGAPKPLQDLFTSN 304
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|1210527289|dbj|GAX13924.1| (hypothetical protein FisN_5Lh173 [Fistulifera solaris]) HSP 1 Score: 226.098 bits (575), Expect = 4.638e-67 Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 0
Query: 195 VTEEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPP 401
V E DF + + ++ + ++RTPP+TKAYL AS T LFNKN++P L L+W V+ RLQIWRPFTSFL FG FG Y+L+A F+WTYMA LE+L P DF ++LFG +++G PL+ P FLGHNLS YLVY+WSR EG +V++ +F+ A +LPWFF+AQT +LE E P+ D LGI GH+YH+ T +++ P
Sbjct: 97 VAEADFAEANTLDRVLEAWKRTPPLTKAYLTASFGATMYGYLFNKNEFPRILTLEWKPVLQRLQIWRPFTSFLNFGPFGLGYILTAQFVWTYMATLERLNHNRPFDFWILMLFGQLSMVIGYPLLKLSPRFLGHNLSTYLVYIWSRYHEGVEVNMFEMFNTKAELLPWFFLAQTFLLEGEPPVLDFLGIVFGHIYHHCKTVGILRAP 303
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|1210524072|dbj|GAX16801.1| (hypothetical protein FisN_5Hh173 [Fistulifera solaris]) HSP 1 Score: 225.328 bits (573), Expect = 8.594e-67 Identity = 105/205 (51.22%), Postives = 141/205 (68.78%), Query Frame = 0
Query: 197 EEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPP 401
E DF + + ++ + ++RTPP+TKAYL AS T LFNKN++P L L+W V+ RLQIWRPFTSFL FG FG Y+L+A F+WTYMA LE+L P DF M+LFG +++G PL+ P FLGHNLS YLVY+WSR EG +V++ +F+ A +LPWFF+AQT +LE E P+ D LGI GH+YH+ T +++ P
Sbjct: 97 EGDFAEANTIDRVLEAWKRTPPLTKAYLTASFGATMYGYLFNKNEFPRILTLEWKPVLQRLQIWRPFTSFLNFGPFGLGYILTAQFVWTYMATLERLNHNRPFDFWIMMLFGQLSMVIGYPLLKLSPRFLGHNLSTYLVYIWSRYHEGVEVNMFEMFNTKAELLPWFFLAQTFLLEGEPPVLDFLGIVFGHIYHHCKTVGILRAP 301
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|219119679|ref|XP_002180594.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408067|gb|EEC48002.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 216.468 bits (550), Expect = 2.273e-63 Identity = 101/205 (49.27%), Postives = 138/205 (67.32%), Query Frame = 0
Query: 197 EEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPP 401
E +F + + ++ +R+TPP+TK YL AS + T LFN+N++P LLLDW V+ +LQIWR TSFL FG G YL++AHF+WTYMA LE+L P DF M+ FG ++VG P+ P FLGHNLS +LVY+WSR EG +V++ LF+ A +LPWFF+AQT +LE ELP+ D LGI GH+YH+ T +++ P
Sbjct: 105 ESEFAEDNTVDRMIDAWRKTPPLTKGYLSASFAATLYGYLFNRNEFPTVLLLDWKPVLQKLQIWRLLTSFLNFGPLGLGYLMTAHFVWTYMATLERLNHDRPYDFWIMIFFGQLSMVVGYPIFKLSPRFLGHNLSTFLVYIWSRYHEGMEVNMFELFNTRAEMLPWFFLAQTFLLEGELPVLDFLGIVFGHIYHHCKTVGILRAP 309
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|397629229|gb|EJK69265.1| (hypothetical protein THAOC_09486 [Thalassiosira oceanica]) HSP 1 Score: 213.772 bits (543), Expect = 2.183e-62 Identity = 101/233 (43.35%), Postives = 145/233 (62.23%), Query Frame = 0
Query: 197 EEDFNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKH-----FRKLYRSFEDDL 424
E+DF D + ++LK+ Y +TPP+TKAYL AS L NKN++ L L W + RLQ+WRP T+FL FGS G YLL+ F+WTY + LE+L P DF M+ FG + ++ G +MG PH LGHNLS YLVY+WSR EG +V++ LF+ A +LPWFF+AQT +LE + P+ D LGI GH+YH+ + +++ P F+ ++ + R+ Y++ D
Sbjct: 97 EDDFGDENTLTQLKEAYAKTPPLTKAYLTASFGAAALGYLTNKNEFLPILQLSWKPTLTRLQLWRPLTAFLNFGSLGLGYLLTIQFVWTYASTLERLNHNTPYDFWLMMFFGAAMMVTGYSIMGLNPHVLGHNLSTYLVYIWSRYHEGLEVNMFELFNTRAEMLPWFFLAQTFLLEGQAPVLDFLGIVFGHIYHHYKSTDVLRTPKFVISWYNSDNKYAEMIREKYKTISSDF 329
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|873224116|emb|CEM27117.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 210.305 bits (534), Expect = 8.011e-61 Identity = 116/257 (45.14%), Postives = 156/257 (60.70%), Query Frame = 0
Query: 180 EEDAEEDEDDYDEEGVTEEDF-NDGSFASKLK---KEYRRTPPVTKAYLMASLSVTTAA-MLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLM-------GFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHFRKLYRSFEDDL 424
E D++ D +D + + E DF +D S SKL K + RTPP+TK YL+ S +T A L K +P L+ DW KV+ + QIWR T F Y G FG +YL++A F+WTYMA+LEKL K+P F ++LFG++ L + PL+ P LGHNLS ++VYVWSR EGQDV++M LF L A LPWFFV QT +LE + P DLLGIA G LYH+ +R +K P L+ F Q ++ Y +E +
Sbjct: 86 EGDSDFDAEDDFGDSLVEADFESDNSVQSKLLDLLKAFDRTPPITKGYLLTSAFLTGGAYFLTAKKVFPRELMYDWKKVL-QGQIWRLMTGFFYIGDFGLSYLMTAQFIWTYMANLEKLNYKHPEQFAILLLFGMACLTLAYPLLNAMDPTWALVPEMLGHNLSSFIVYVWSRTHEGQDVNIMDLFQLRAEYLPWFFVMQTWLLEGQAPTFDLLGIAFGWLYHWLKSRHWLKSPPPLKDLFRQPVLKRQYEKYEKEF 341
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|944186103|dbj|BAT25220.1| (symbiotic PPC-localized Der [Nitzschia sp. IriIs04]) HSP 1 Score: 209.149 bits (531), Expect = 7.927e-60 Identity = 107/241 (44.40%), Postives = 142/241 (58.92%), Query Frame = 0
Query: 194 GVTEEDFNDGSF------ASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFF----AQKHFRKLYRSFEDDL 424
GV E D +D + + + Y +TPP+TKAY+ AS T LFN N +P WLLLDW K+V R Q WR FT+F+ FG FG Y L+ F+WTYM+ LE+L P DF M+ FG+ ++VG +G LGHNLS YLVYVWSR EG DVD+ LF A +LPWFFVAQT +LE P+ D+LGI GH+Y + + L++ P L ++ + K R+ Y+ D
Sbjct: 108 GVLEMDLDDDTAFREADPMDRFLQAYHKTPPLTKAYITASALATAYGFLFNNNVFPSWLLLDWRKIVTRGQFWRIFTTFVNFGPFGIGYALTCRFIWTYMSTLERLHHHRPYDFWIMIGFGMISMVVGYSFLGLNAQLLGHNLSTYLVYVWSRHHEGMDVDMFELFTARAELLPWFFVAQTYLLEGAPPIMDILGIVFGHVYFHCKSTGLLRAPDALVDWYVTSESAKPIRQQYKQISSDF 348
BLAST of EWM30647.1 vs. NCBI_GenBank
Match: gi|298712989|emb|CBJ26891.1| (Derlin (Degradation in endoplasmic reticulum protein ) (Der1-like protein) [Ectocarpus siliculosus]) HSP 1 Score: 200.675 bits (509), Expect = 1.445e-55 Identity = 96/224 (42.86%), Postives = 146/224 (65.18%), Query Frame = 0
Query: 200 FNDGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGF---QPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPP----------AFLRVFFAQ 410
F + SF +LK+++++TP +T+AY S+++T AA N+NQWP +LLLDW + +LQ+WR FT FL G G N+ L+AHF WTYM+HLEKL + P FV ++ FG+S LL+ + + G + LGH+++C+LV +WSR F G V+++ +F LP +LP+FFVAQT+++E +P DL GI +G+ + S + L+K P AFLR +A+
Sbjct: 115 FGEASFVDRLKQDWKKTPVITRAYFQVSVAITLAAAALNENQWPTFLLLDWRPAIFKLQLWRLFTPFLNLGPLGLNFALTAHFAWTYMSHLEKLHYREPHTFVMLLAFGMSSLLLLTLVTGGDVNSSYTLGHSMNCFLVMIWSRKFAGTRVNMLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGILIGYAWQTLSLKGLLKAPKPLVNLFRNNAFLRAEYAK 338 The following BLAST results are available for this feature:
BLAST of EWM30647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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