EWM30391.1, cds258 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|585113051|gb|EWM30391.1| (iron-sulfur cluster assembly 2 mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 399.053 bits (1024), Expect = 9.797e-141 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MLPSSVGRSSRRGISSGAWLKATKVRPQVLSPRNQPPSLRAQGIYRRSWSIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193
MLPSSVGRSSRRGISSGAWLKATKVRPQVLSPRNQPPSLRAQGIYRRSWSIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID
Sbjct: 1 MLPSSVGRSSRRGISSGAWLKATKVRPQVLSPRNQPPSLRAQGIYRRSWSIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|223993849|ref|XP_002286608.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977923|gb|EED96249.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 135.961 bits (341), Expect = 2.902e-37 Identity = 69/151 (45.70%), Postives = 102/151 (67.55%), Query Frame = 0
Query: 60 SSNAVSNSPQMSLDEDVVVTNACIKRIKAL-QVKTGKENLKLRLSVEGGGCSGFTYTFTM---------------EDGPVE-DDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193
S+N V+ + S + ++ +T +C RIK L + +++ LRL V+ GGCSGF Y F + EDG ++ D+D ++ ++G +VVVD+ SLE +RGST+D+ ++M+RS+FAV+SNP SESACGCGSSFA+KNFE NPA+D
Sbjct: 21 STNEVTITNSTSSEGELTITASCAARIKQLASTRPNPDSIYLRLYVDAGGCSGFQYKFLLLSEDNDMNNSLEDDEEDGAIDPDEDIIFVKDGMRVVVDQTSLELLRGSTIDYVQEMIRSSFAVMSNPQSESACGCGSSFAVKNFETNPALD 171
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|971516142|dbj|GAQ82066.1| (ISCA-like protein [Klebsormidium nitens]) HSP 1 Score: 130.183 bits (326), Expect = 5.645e-35 Identity = 63/114 (55.26%), Postives = 87/114 (76.32%), Query Frame = 0
Query: 73 DEDVVVTNACIKRIKALQVKTG--KENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
D+ V +T +C +R+K LQ + G + L LRLSVEGGGCSGF Y+F++ D ++ DD+V+ R GAQ++VD+ S FV+G+TVDF+E+++RSAF VV NP S SACGCG+SFA K
Sbjct: 59 DDTVHITESCAQRLKELQQEEGVSPDQLMLRLSVEGGGCSGFQYSFSL-DSKLQPDDRVFRRNGAQLLVDKVSYAFVKGATVDFSEELIRSAFTVVDNPNSTSACGCGTSFAAK 171
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|755990179|ref|XP_011312432.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Fopius arisanus]) HSP 1 Score: 126.716 bits (317), Expect = 8.921e-34 Identity = 56/135 (41.48%), Postives = 97/135 (71.85%), Query Frame = 0
Query: 50 SIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
S+ + R++++NA N + +L +++++C+KR+K + ++ LR++VEGGGCSGF Y F + D V DDDKV+ ++GA++++D SLE+V+GST+DF +++RSAF +++NPL+E C CG+SF++K
Sbjct: 33 SLQNGNLRKVATNAAENVSEDAL----IISDSCVKRLKEI----SQDGACLRVTVEGGGCSGFQYKFDL-DSTVHDDDKVFLKDGAKIIIDSTSLEYVKGSTIDFHSELIRSAFRIINNPLAEQGCSCGASFSIK 158
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|817193571|ref|XP_012272251.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Orussus abietinus]) HSP 1 Score: 126.716 bits (317), Expect = 1.170e-33 Identity = 64/157 (40.76%), Postives = 102/157 (64.97%), Query Frame = 0
Query: 28 QVLSPRNQPPSLRAQGIYRRSWSIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
+ +SP + P + R WS S+N S++P D+++ ++CI+R+K L K +++ LR+SVEGGGCSGF YTF + D V +DDKV+ ++GA+V+ D +LE+++GST+++ +++RSAF VV NPL+E C CG+SFA+K
Sbjct: 18 RYISPLSTFPCRELSALITR-WS---------STNLASSTPT----SDLIIDDSCIQRLKEL-TKGSDKDMFLRISVEGGGCSGFRYTFDL-DSNVNEDDKVFQKDGAKVIADSTTLEYIKGSTIEYHTELIRSAFRVVGNPLAEQGCSCGASFAIK 158
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|1000716476|ref|XP_015588788.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Cephus cinctus]) HSP 1 Score: 125.561 bits (314), Expect = 2.713e-33 Identity = 55/126 (43.65%), Postives = 93/126 (73.81%), Query Frame = 0
Query: 59 LSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
+ ++A +NS Q + ++D++++++C KR+K + LR++VEGGGCSGF Y F + D + +DDKV+ ++GA+VV+D SLE+V+GST+D+ ++++RSAF + +NPL+E C CG+SFA+K
Sbjct: 33 VKASASTNSSQDAAEDDLIISDSCAKRLKEI----ASNGACLRVTVEGGGCSGFQYKFDL-DSKINEDDKVFQKDGAKVVIDSTSLEYVKGSTIDYHKELIRSAFRITNNPLAEQGCSCGASFAIK 153
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|698803228|ref|XP_009834643.1| (hypothetical protein H257_09952 [Aphanomyces astaci] >gi|574110502|gb|ETV76001.1| hypothetical protein H257_09952 [Aphanomyces astaci]) HSP 1 Score: 124.79 bits (312), Expect = 2.965e-33 Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 75 DVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
D+++T A ++ AL +T LR++VEGGGCSGF Y T+ED P+E+DD+V+ ++GA VVVD S++ ++GSTVDF ++++RS+F V++NP + S CGCGSSF MK
Sbjct: 25 DLIITKATSNQLNALN-RTAATKQHLRVAVEGGGCSGFQYVITLEDTPLEEDDRVFEKDGAAVVVDPTSMDLLKGSTVDFAQELIRSSFTVINNPNAVSGCGCGSSFEMK 133
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|970888007|ref|XP_015109139.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Diachasma alloeum]) HSP 1 Score: 125.176 bits (313), Expect = 4.683e-33 Identity = 52/122 (42.62%), Postives = 91/122 (74.59%), Query Frame = 0
Query: 63 AVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
A +N+ + ++ ++++++C++R+K + ++ LR++VEGGGCSGF Y F + D V DDDKV+ ++GA++++D SLE+V+GST+DF +++RSAF +++NPL+E C CG+SFA+K
Sbjct: 42 AATNAAEDVSEDALIISDSCVRRLKEI----SQDGACLRVTVEGGGCSGFQYKFDL-DSTVHDDDKVFQKDGAKIIIDSTSLEYVKGSTIDFHSELIRSAFRIINNPLAEQGCSCGASFAIK 158
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|642929363|ref|XP_008195804.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Tribolium castaneum]) HSP 1 Score: 124.405 bits (311), Expect = 5.827e-33 Identity = 58/149 (38.93%), Postives = 98/149 (65.77%), Query Frame = 0
Query: 39 LRAQGIYRRSWSIYRHDFRQLSSNAVSN---SPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
++ G+ RR + + R S S P + ++++T+ C++R+K + + + LR+SV+GGGCSGF Y F + D + +DDK++ + GA+VV+DE SL+FVRG+TVD+ E++++S+F +V+NPL+E C CGSSFA++
Sbjct: 1 MKMSGLVRRFYPFKINSVRNFLSRNYSKPVIKPLEHIKPELIITDTCVERLKNISKNSDEF---LRVSVDGGGCSGFQYKFDL-DSKINEDDKIFEKNGAKVVIDETSLDFVRGATVDYREELIKSSFRIVNNPLAEQGCSCGSSFAVR 145
BLAST of EWM30391.1 vs. NCBI_GenBank
Match: gi|1080050296|ref|XP_018566595.1| (PREDICTED: iron-sulfur cluster assembly 2 homolog, mitochondrial [Anoplophora glabripennis]) HSP 1 Score: 124.02 bits (310), Expect = 7.503e-33 Identity = 56/117 (47.86%), Postives = 89/117 (76.07%), Query Frame = 0
Query: 68 PQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMK 184
P ++ ++ +T+ CI+R+K ++ G ++ LR+SVEGGGCSGF Y F + D + DDDKV+ R GA+VV+DE SLE+V+G+TVD+ E+++R++F +V+NPL+E C CG+SFA++
Sbjct: 32 PLENVKAELNITDKCIERLK--KIVNGSDSF-LRVSVEGGGCSGFQYKFDL-DNKLTDDDKVFERNGAKVVIDETSLEYVKGATVDYQEELIRASFKIVNNPLAEQGCSCGASFAVR 144 The following BLAST results are available for this feature:
BLAST of EWM30391.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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