EWM28085.1, cds2574 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|585110428|gb|EWM28085.1| (hypothetical protein Naga_100120g24 [Nannochloropsis gaditana]) HSP 1 Score: 737.258 bits (1902), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0 Query: 1 MMARTCGYQLVAMVIFLRTCVAFVPPSSSLPPSPTLFSRSTRLSVGNVNVDFYPGLRGLFDMGNIILEEVRAGGKEAEQEMAEMAGWVKDKVRVKQQVVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDVE 357 MMARTCGYQLVAMVIFLRTCVAFVPPSSSLPPSPTLFSRSTRLSVGNVNVDFYPGLRGLFDMGNIILEEVRAGGKEAEQEMAEMAGWVKDKVRVKQQVVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDVE Sbjct: 1 MMARTCGYQLVAMVIFLRTCVAFVPPSSSLPPSPTLFSRSTRLSVGNVNVDFYPGLRGLFDMGNIILEEVRAGGKEAEQEMAEMAGWVKDKVRVKQQVVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDVE 357
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|585108810|gb|EWM26722.1| (hypothetical protein Naga_100001g144 [Nannochloropsis gaditana]) HSP 1 Score: 228.794 bits (582), Expect = 1.038e-68 Identity = 115/288 (39.93%), Postives = 184/288 (63.89%), Query Frame = 0 Query: 76 EAEQEMAEMAGWVKDKVRVKQQVVQQSPV----ILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDVE 357 E E A +++ R+++++ Q+ + HPV G+L+ D+ YKK+YC ++ +LA +PIWE+QRI R ERA+ +A + K+++ + LPG +T+Y++ + + LLDGQHRL ALK+L DSG++ + + L+EVF ++ + + + LF EIN+A PV +ID+PD A K II + L +F FK S+N +LPHVNID +RD LF+ ++V R G +A +LL+W++ N+ L+ + D W R +KGR P +EKAV KA+ F+LG++ W+ E Sbjct: 79 EVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIARE---KMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFE 363
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|857970971|emb|CEP02832.1| (hypothetical protein PBRA_002799 [Plasmodiophora brassicae]) HSP 1 Score: 181.415 bits (459), Expect = 3.122e-51 Identity = 98/265 (36.98%), Postives = 160/265 (60.38%), Query Frame = 0 Query: 98 VVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-----EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGN-AQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMD 355 V Q+P HPV G++ +D+TYK+++ TS+ L IP+W +QR ERA ++ +K + + LPG +T++E E+G++DGQHRL A++LL+ G I V++F V D+ LF++IN A+PV ++D+P+ AD + KE + + E +R +F MF+PS CR PH+N+DVLRD +++S+++ + N +Q LL+ N + R DA W +A G K A +KA+ KARDN +L ++ +W++ Sbjct: 39 VADQTPA--HPVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEISQHLKQRPR------LPGVITLFEKVSSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINRAEPVLLVDLPESGADDTTKEKLNRAIEQIRAKFPTMFRPSQQCRPPHLNVDVLRDEIWQSDLLDKVPVDNLSQYLLD----ANHAMHERTDAQWRKALSG-KSRAFKKALTKARDNACYLALDKSWLN 290
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|922862534|gb|KOO30123.1| (hypothetical protein Ctob_012497 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 181.415 bits (459), Expect = 1.707e-49 Identity = 111/267 (41.57%), Postives = 145/267 (54.31%), Query Frame = 0 Query: 107 HPVFGELVKDLTYKKIYCTSVQKL-ASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEM---------------GEEIG-LLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPE-AVEKAVLKARDNHFFLGMEPNWM 354 HPVFGEL+ D YK++Y S L A +WE+QR +R ERA L+A G PG++ V E G IG L+DGQHRLGA LL G L ILVEV+P ++ VK LFTEIN A+PV ++D+P+ A + I+T AE L + MFKPS CR PH+N+DVLR L ++ V+ R +A +LL+WV N L AR D W K E A+ A+ KAR N F+LGM +W+ Sbjct: 181 HPVFGELIADFGYKRLYRGSPTTLWAGTMLWERQRAFRQERANLIAAAKAKSKATG----WPGAIAVVERSSSGSEASAPTGHGGGTAIGTLIDGQHRLGAAHLLAQRGKLDGALASILVEVYPPMEEQGVKDLFTEINRAEPVLLVDLPEGGASDQDNAILTAAAEELAQRYPAMFKPSHGCRPPHLNVDVLRAELHRAEVLSRHKLASAAELLDWVDKANRDLGARSDEQWASTGARAKSETALGNALSKARQNAFYLGMGWDWL 443
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|551643833|ref|XP_005824709.1| (hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712] >gi|428168789|gb|EKX37729.1| hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712]) HSP 1 Score: 175.637 bits (444), Expect = 8.830e-48 Identity = 109/263 (41.44%), Postives = 151/263 (57.41%), Query Frame = 0 Query: 107 HPVFGELVKDLTYKKIYCTSVQKL-ASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEM---GEEIGLLDGQHRLGALKLL---MDSGVLIPEAHL------ILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMD 355 HP+FG + D YKK++ KL S PI+++QR +R ERA +A KAK PG+++V E G+ + L+DGQHRLGA LL M S P+ L ILVEV+P + +FTEIN A+P ++D+P K+II +E LR +S MFKPS CR PH+NID LRD LF++NVV R G + LL W+ AKND LAA W R + + + +EKA+ KA +F+LG+E +W++ Sbjct: 122 HPIFGRFLADFGYKKVFAADPSKLYTSTPIYKKQRTFRTERASSIAR-AKAK---SSVTGWPGTISVVEYTGKGQAV-LVDGQHRLGAHTLLARQMKSQN--PDRPLPLGMTEILVEVYPADNENMAAEVFTEINKAEPCKLVDLPQAKVPVQTKKIIDGASEKLRQRYSAMFKPSSACRTPHMNIDNLRDELFQANVVARYGFKTEEDLLNWMLAKNDELAAIPRGEW-RPKRRTRAKTLEKALEKAVAQNFYLGLEWDWLN 376
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|1072224731|gb|OEU09480.1| (hypothetical protein FRACYDRAFT_248332 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 176.407 bits (446), Expect = 1.061e-47 Identity = 96/255 (37.65%), Postives = 151/255 (59.22%), Query Frame = 0 Query: 107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYE-MGEEIGLLDGQHRLGALKLLMDSGVLIPEAHL--ILVEVFPVKAQED----VKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWM 354 HP+ G+ + +L YK+I+ S++ LA+IP+WE+QRI+R R + +A D L L LPG + ++E + + ++DGQHR+G LK+L ++ V + ILVEV+P E K LF E+N A+PV ++D+P + +AS+K+II + A+ L+ F EMF S CR PH+NID LRD LF+SN++ + G ++ + +W+ +NDLL + R E A+ KA F+LG+E W+ Sbjct: 199 HPILGKCISELGYKRIHLASLKNLATIPVWEKQRIFRLARTKKMATDKMKTLH----LGLPGIIGIFENIDGSLNIVDGQHRVGMLKVL-ETKVTSDDFDFDNILVEVYPALKDEHEETHAKDLFLEVNKAEPVKLVDLPGVGNASDKKIINEVADRLQDSFPEMFSDSQRCRAPHLNIDNLRDALFQSNIIRKHGHKTSKAVEDWILEQNDLLEVKYQVEENREL------VKETALKKAEQFRFYLGLESYWL 442
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|255082358|ref|XP_002504165.1| (predicted protein [Micromonas commoda] >gi|226519433|gb|ACO65423.1| predicted protein [Micromonas commoda]) HSP 1 Score: 178.333 bits (451), Expect = 1.290e-47 Identity = 105/287 (36.59%), Postives = 160/287 (55.75%), Query Frame = 0 Query: 101 QSPVILHPVFGELVKDLTYKKIYCTSVQKLA---SIPIWEQQRIYRAERAQLLANDIKAK-----------LQEGKALT-----------LPGSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAY--KGRKPEAVE----KAVLKARDNHFFLGMEPNWMDV 356 + V H ++G +++D YKKIY + L + I++QQR +RAERAQ++A + KAK L EG A L GS + G I LDGQHR+GAL++L+ GV+ P+ H +LVEVF +FTEIN AQP+ +DMP +A A K ++ A+ ++ + MF S C++P++N+DVLR+ LF + VV R G + + W++++N LA R + WL A +GR E KA+ KA+++ F+LGM+ +W+DV Sbjct: 260 EKKVASHELYGTMLRDFGYKKIYAMPAKNLVCKDKVGIYDQQRAFRAERAQVIAAE-KAKEAVFSLPGVVTLAEGTAAVRGKKTKKKSSLLFGSSSANNTGAHI--LDGQHRVGALEILLSQGVIAPD-HTVLVEVFENVDDARASEIFTEINAAQPIRFVDMPGVAPADVKWMLEGAAQRIKERYRAMFSASERCKIPNINLDVLREELFSAEVVTRFGIADEDAFVAWLESENAKLAQRTEKEWLEARPKRGRGSTGSEETYLKALAKAKEHGFYLGMDFSWLDV 542
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|1210524228|dbj|GAX16957.1| (hypothetical protein FisN_5Hh335 [Fistulifera solaris]) HSP 1 Score: 172.555 bits (436), Expect = 2.269e-46 Identity = 99/269 (36.80%), Postives = 160/269 (59.48%), Query Frame = 0 Query: 89 KDKVRVKQQVVQQSPVILHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQ---EDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNW 353 KD+ + + Q Q+ HP+ G L YK ++ S + LA IP+WE+QRIYR +RA+ +A D KL+ K L +PG +T+YE + ++ ++DGQHR+G + LL + V + +LVEV+ A+ + K +F EIN A+PV ++DMP +A A ++ II + A+LL + MF PS CR+P++NID LRD LF +NV+ R A L W+ +N ++ A+ ++ + +K +V A+ KA + F+LG++ +W Sbjct: 170 KDETQEETQSKQE-----HPILGMAHASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKAMAQD---KLKTMK-LGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDNVLVEVYKELAEYGEDHAKDIFLEINKAEPVKLLDMPGVATAKDRTIINRGAQLLMERYPSMFSPSQKCRVPNLNIDNLRDALFAANVIKRHSLTTASALEAWLLEQNAIMEAK-----YQSDEAKKTVSV-SALAKAETHSFYLGLDSSW 423
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|1210515730|dbj|GAX25253.1| (hypothetical protein FisN_5Lh335 [Fistulifera solaris]) HSP 1 Score: 172.555 bits (436), Expect = 2.890e-46 Identity = 95/251 (37.85%), Postives = 152/251 (60.56%), Query Frame = 0 Query: 107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVF---PVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNW 353 HPV G L YK ++ S + LA IP+WE+QRIYR +RA+ +A D K++ K L +PG +T+YE + ++ ++DGQHR+G + LL + V + +LVEV+ P ++ K +F EIN A+PV ++DMP +A A ++ II + A+LL F MF PS CR+P++NID LRD LF +NV+ R +A L W+ +N + + ++ + +K +V A+ KA+ + F+LG++ +W Sbjct: 187 HPVLGMAYASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKSMAQD---KMKTMK-LGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDSVLVEVYKELPEYGEDHAKDIFLEINKAEPVKLLDMPGVATAKDRTIINRGAQLLMERFPSMFSPSQKCRVPNLNIDNLRDALFAANVIKRHSLTSAPALEAWLLEQNAKMEVK-----YQSDEAKKTVSV-AALTKAKTHSFYLGLDSSW 427
BLAST of EWM28085.1 vs. NCBI_GenBank
Match: gi|551654516|ref|XP_005830034.1| (hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712] >gi|428174156|gb|EKX43054.1| hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712]) HSP 1 Score: 168.703 bits (426), Expect = 9.494e-46 Identity = 99/259 (38.22%), Postives = 156/259 (60.23%), Query Frame = 0 Query: 107 HPVFGELVKDLTYKKIYCTS-VQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE------EIGLLDGQHRLGALKLLMDSGVLIPE-AHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMP--DM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWM 354 H ++G+L+ DL YKKIYC + V LA IW++QR +R RA+ +AN +G PG++++ E+ + E ++DGQHRL A +L+ S PE A ++VEV+P ++ LF EIN A+P+ +D+P D+ A A+ + I++ AE L+ EMFK S NCR+PH+NID LRD L ++ V+ G + + LL+W++ +N LA +DD W + ++G + KA+ KAR ++FFLG+ W+ Sbjct: 86 HEIYGQLMVDLGYKKIYCANPVTLLAQAKIWKKQRAFRQHRAESIANSKMKSSVKG----WPGTISIAEIKDPENSEKECFIVDGQHRLAAC-MLLSSKENAPEGADKVIVEVYPDMQDQNTTDLFVEINKAEPILHVDIPIADVGASATHQAILSGAAERLQKMNPEMFKESQNCRIPHMNIDRLRDELHQAGVIDENGLKSDEDLLKWLEERNKELAQKDDHYW-KEFEGNATKM--KALEKARKHNFFLGLNWQWL 336 The following BLAST results are available for this feature:
BLAST of EWM28085.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|