EWM28112.1, cds2561 (CDS) Nannochloropsis gaditana

Overview
NameEWM28112.1
Unique Namecds2561
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:687925..689865 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28112.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100036g14.2532.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:687925..689865 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|585110456|gb|EWM28112.1| (hypothetical protein Naga_100036g14 [Nannochloropsis gaditana])

HSP 1 Score: 1305.81 bits (3378), Expect = 0.000e+0
Identity = 646/646 (100.00%), Postives = 646/646 (100.00%), Query Frame = 0
Query:    1 MSDTLPLRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQKRGVKAKGASGPAKKENSRRTDKNTVSKAALVVNAGPRIRTLHRQSGNGTGGPGTGGENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSKGKGRKDPASGRTTSVGDTIDQAGTPCEEAVSEVLDRERRAQAAVARSHSFHGAPAQIVEAARKAEGREGGRKEMEERASLVAVDGESGEIDSDFPEEVSDAWVRVLRSPSFMLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDPSLSEVQGWVSACQNDELDEMMMRLAGGDEDLLEAMECVHVATPKDVRLWGMVPGAFLDMLARELSEEKMAHVQAKLPDVEAVQVLKERAEKLMAENAWLESWGSE 646
            MSDTLPLRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQKRGVKAKGASGPAKKENSRRTDKNTVSKAALVVNAGPRIRTLHRQSGNGTGGPGTGGENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSKGKGRKDPASGRTTSVGDTIDQAGTPCEEAVSEVLDRERRAQAAVARSHSFHGAPAQIVEAARKAEGREGGRKEMEERASLVAVDGESGEIDSDFPEEVSDAWVRVLRSPSFMLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDPSLSEVQGWVSACQNDELDEMMMRLAGGDEDLLEAMECVHVATPKDVRLWGMVPGAFLDMLARELSEEKMAHVQAKLPDVEAVQVLKERAEKLMAENAWLESWGSE
Sbjct:    1 MSDTLPLRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQKRGVKAKGASGPAKKENSRRTDKNTVSKAALVVNAGPRIRTLHRQSGNGTGGPGTGGENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSKGKGRKDPASGRTTSVGDTIDQAGTPCEEAVSEVLDRERRAQAAVARSHSFHGAPAQIVEAARKAEGREGGRKEMEERASLVAVDGESGEIDSDFPEEVSDAWVRVLRSPSFMLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDPSLSEVQGWVSACQNDELDEMMMRLAGGDEDLLEAMECVHVATPKDVRLWGMVPGAFLDMLARELSEEKMAHVQAKLPDVEAVQVLKERAEKLMAENAWLESWGSE 646          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|299473604|emb|CBN77999.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 140.584 bits (353), Expect = 4.142e-31
Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 0
Query:  154 TGGENATRKRRRMNVGVS--NEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRL-DGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLS 348
            TGG  A  ++R    GV   +E D+ E LL +VG GGG G   R  R   + AV+K +D+++A ARV A  GG Y+A+AS  +RRL DG    L + + KG G +S   + V+ + + Q+  VVR +  D + REMLKP N AGCSPR+FWSL+ H+  +               AALR   P+ DW F+  R RK S
Sbjct:  216 TGGSGAPNRKRPRGTGVQLKSEGDIAERLLTAVG-GGGKGTADRFFRKAMKLAVDKQYDQSRADARVRAALGGWYTAEASATQRRLGDGESVALDISFSKGAGAKSQLTETVDRIPREQVSAVVRMIARDPESREMLKPHNFAGCSPRMFWSLVQHWGGD-------------VPAALRLAAPDVDWGFVETRDRKPS 399          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|223996853|ref|XP_002288100.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977216|gb|EED95543.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 132.494 bits (332), Expect = 1.347e-28
Identity = 169/649 (26.04%), Postives = 267/649 (41.14%), Query Frame = 0
Query:   50 LMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVK------EDG-----------GEEPRVLQGHGLMKQKRGVKAKGASGPAKKENSRRTDKNT--------VSKAALVVNAGPRIRTLHRQSG----NGTGGPGTGG-------ENATRKRRRMNVGVSNEEDLGELLLASVGK-----GGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKAS-----IEERRLDGSCARLH-----VLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVL----------------ADVDGREMLKPANMAGCSPRVFWSLMHHFNANSIE----GGGQEGLDKGTEAALRWLVPEQDWAFLHE--RHRKLSDKAKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSKGKGRKDPASGRTTSVGDTIDQAGTPCEEAVSEVLDRERRAQAAVARSHSFHGAPAQIVEAARKAEGREGGR---------KEMEERASLVAVDGESGEID--SDFPEEVSDAWVRVLRSPSF--MLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDPSLSEVQGWVSACQNDELDEMMMRLAGGDEDLLEAM-ECVHVATPKDVRLWGMVPGAFLDMLARELSEEKMA 611
            L+SGFPPK L  +       + +  NE V V+      +DG           G   R          K+ ++A+ A    +K+ SR+    +         +K    +  GP  R     +G    +G   PG+           AT K+R+  +   +++D+   LL S+        G G  V + +RA  + AV K++++++A  RV AV+ G +          + E   DGS   L      V Y KG   +  Y + VE++    L  V++SV                  +VDGREML+PA+MA  SPRVFWSL+  F     E       Q+      E  L+ ++P  DW+ L    R R LS+KAKEN  Q +       E+A+     REA     + +  +  +S G GR                          SE  +RERRA AA+AR   F  A A       K +                + E+   L+    E GE D  ++  E+ +  +  +L S S    + +   LA   +E+++ +L     +G +    + P+   +Q W+ A Q   LDE+M+ +  GD+D LE + E    ++P+DV  W   PG   + +     EE+ A
Sbjct:   80 LLSGFPPKELNREGKATVADLGVGRNESVIVRFALAANDDGDAVGSTEPPTRGRPKRATAEAATSSFKQVIQAQDAILRNEKKTSRKKATGSGGGFGNVNENKRIATIGGGPNKRAKMEGAGYRLSDGKSFPGSSRRKKTALRTTATAKKRKGPL-FDSKDDIASSLLYSLNSTSSTGNGKGANVNKFLRAAMKGAVMKSYEKSRAQVRVMAVENGEFEMVKGDGGNVLGETNHDGSSGELERNLYTVSYSKGIEGRGKYEEQVEIIGLDALKAVLQSVYNSRSSSGDDDDSEEEGENVDGREMLRPADMAQMSPRVFWSLV--FQCTRTEEKKAASTQQQHHPSVEEMLQNIMPNLDWSHLERGGRKRNLSEKAKENLKQAKGYTASEVEDAKVSSQDREAGVKALEEMEESIMNSLGGGR--------------------------SEADERERRAMAALAR---FGSAGAHAATGKNKTDDTADDNATAQWKLVTPDEEDVDELLECILEPGEEDEATNLSEDAAKRYATLLMSESSEPRIRNYRELANVTSEDVMTKLV---PSGGQQSNANLPTFDTLQQWIDAAQRRSLDEIMLEILDGDQDALELLIEKASTSSPRDVVNWEASPGLLSEAVGSSKYEEEDA 693          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|953499141|emb|CEG39453.1| (hypothetical protein PHALS_09699 [Plasmopara halstedii])

HSP 1 Score: 121.709 bits (304), Expect = 2.738e-25
Identity = 112/393 (28.50%), Postives = 182/393 (46.31%), Query Frame = 0
Query:    7 LRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQKRGVKAKGASGPAK--KENSRRTDKNTVSKAA------LVVNAGPRIRTLHRQSGNGTG---GPGTG----------GENAT----RKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEEARRK 372
            +R+RGP G   VL   +   +++  L +     L L         +GFPPK +  D+    +  + +PN+ V V +       +L  +           K AS  AK  K   R T KN+ + A+      L  +   + +T+ ++   GTG   G   G          GEN +    + RR   + ++++ED+ E+ L +   G    R  +  RAV R AVE  ++   A AR+ A     +  +  +  RR DGS A+L V + +    +    + V+ L + +L  +++ VL      GREMLKP NMA  S RVFWS+ H ++ N  EG             L  LVP++DW+F+  R R LS+KA E +A EE+ +  ++ + ++K
Sbjct:    4 IRIRGPGGKQVVL--KVEPETTLKYLSELASKELGLKTKDLLTFCTGFPPKPVKADSLTL-VNSVFEPNDTVVVGKTLNTVDDMLPAN-----------KSASSAAKITKRFVRPTPKNSDALASKSGVHTLNPSTSAKKKTIPKRKIPGTGHQLGSSLGNSEFEAAELAGENESEPQRKFRRSKTINLTSKEDV-EVNLVNAVSGQSRDRAVKFFRAVTRNAVEHQYELTLATARLNAALAHNFETEELLTIRRGDGSAAKLRVRFKETP--RKWKEETVDFLKKYELQAILKYVLLSGGETGREMLKPFNMAQVSTRVFWSIAHMYDGNVAEG-------------LADLVPDEDWSFIDIRTRVLSEKATEAKANEEQYKLWKQGKQKKK 366          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|301117438|ref|XP_002906447.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107796|gb|EEY65848.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 108.227 bits (269), Expect = 7.141e-21
Identity = 77/249 (30.92%), Postives = 123/249 (49.40%), Query Frame = 0
Query:  140 TLHRQSGNGTGGPGTGGENATRKRRRMN-VGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQ-REREEEARRKRMWREARGAGRQ 384
            +L        G  G G +   RK RR   + ++++ED+ E+ L +   G   GR  +  RA  + AVE  ++   A +R+ A    ++  +     RR DGS A+L V + +      +  + V+LL   +L  +++ VL      GREMLKP NMA  S RVFWS+ H ++ +   G             L  LVP++DW+FL  R R +S+KA E +A+ +  Q R  EE+ +R   W++ +    Q
Sbjct:  109 SLENDPSEAAGVEGDGEDEPQRKYRRSKAINLNSKEDV-EISLVNAVSGQSHGRAAKFFRAATKNAVEHQYETTLATSRLNAALAHKFEIEELSTARRADGSAAKLRVRFKETPRKWKE--ETVDLLKTDELQAILKYVLISGGETGREMLKPFNMAQVSTRVFWSIAHLYDGDVAAG-------------LADLVPDKDWSFLDTRTRVMSEKAMEAKARGKHFQLRANEEQYKR---WKQEKQGDTQ 338          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|695375224|ref|XP_009515493.1| (hypothetical protein PHYSODRAFT_343759 [Phytophthora sojae] >gi|348688404|gb|EGZ28218.1| hypothetical protein PHYSODRAFT_343759 [Phytophthora sojae])

HSP 1 Score: 104.76 bits (260), Expect = 8.552e-20
Identity = 75/236 (31.78%), Postives = 115/236 (48.73%), Query Frame = 0
Query:  161 RKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSK 394
            + RR   + ++++ED+ E+ L +   G   GR  +  RA  + AVE  ++   A AR+ A     Y  +     RR DGS A+L V + +    +    + V+LL   +L  +++ VL      GREMLKP NMA  S RVFWS+   ++ +   G             L  LVP++DW+FL  R R +S+KA E +A EE+            ++W++  GAG  R     A SK
Sbjct:  171 KYRRSRAINLTSKEDV-EISLVNAVSGQSKGRAAKFFRAATKNAVEHQYELTLATARLNAALSHNYEIEEQSTTRRADGSAAKLRVRFKETP--RKWKEETVDLLKTDELQAILKYVLLSGGETGREMLKPFNMAQVSTRVFWSIARLYDGDVAAG-------------LADLVPDEDWSFLDTRTRVMSEKAMEAKANEEQY-----------KLWKQG-GAGGSRTSPRRAESK 378          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|813164266|ref|XP_012203193.1| (hypothetical protein SPRG_08562 [Saprolegnia parasitica CBS 223.65] >gi|641532157|gb|KDO26200.1| hypothetical protein SPRG_08562 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 104.375 bits (259), Expect = 9.607e-20
Identity = 108/386 (27.98%), Postives = 162/386 (41.97%), Query Frame = 0
Query:    7 LRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQKRGVKAKGASGPAKKENS----------------RRTDKNTVSKAALVVNAGPRI----RTLHRQSGNGTGGPGTGGENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDD-VELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQRE-REEE 368
            +R+R PA  S + + +   ASS+    +     L L  S  Y    GFPPK L  +  D P+  ++Q N+ V +      EP +              A    GPA +  +                RRT      KA  V    P+       L     +         E +   +RR  + + ++ED+GE L+ +V    G     + +R+  + AV   ++   A AR+ A   G YS + ++    L  +  R+  L          +RD+ ++LL  ++L  +++ VL      GREMLKP NMA CSPRVFWSL                 D    AAL  L+P +DW+FL  R R LS KA E Q   +  + E R+EE
Sbjct:    4 VRLRSPAKSSVLRIDS---ASSLQAFREQALTALGLAVSDGYTFKGGFPPKELHVEG-DAPMTNVVQNNDTVLI------EPAL--------------AAARPGPATRSMTPKMAPKTAPKAPPAPPRRTTTIAAKKAKRV--PKPKFTGHGHVLGSTVQDDDAESDAPIEPSPLPKRRKMIQLGSKEDVGEKLVHAVSSHRGASTTDKFLRSATKSAVNHQYEMTLANARLHAALAGAYSMQ-TLTPNALGVAQMRVRFLERA-----RTWRDEQLDLLQPTELTSILKYVLLSGGETGREMLKPFNMAQCSPRVFWSLARLS-------------DGDVAAALEKLLPNEDWSFLGTRTRTLSAKALEAQTHSQHYRTEVRDEE 344          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|669149496|ref|XP_008610310.1| (hypothetical protein SDRG_06314 [Saprolegnia diclina VS20] >gi|530737962|gb|EQC36204.1| hypothetical protein SDRG_06314 [Saprolegnia diclina VS20])

HSP 1 Score: 103.99 bits (258), Expect = 1.193e-19
Identity = 104/373 (27.88%), Postives = 160/373 (42.90%), Query Frame = 0
Query:    7 LRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYILMSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQ--KRGVKAKGASGPAKKENSRRTDKNTVSKAALVVNAGPRIRTLHRQSGNGTGGPGTGGENATR------KRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDD-VELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQREREEE 368
            +R+R PA  S VL   +  ASS     +   N L L  S  Y    GFPPK L  ++ D  +  ++Q N+ V ++                    K   K+   + PA    +         +        P+ +   +    G+ G      +A        KRR+M + + ++ED+G+ L+ +V   GG     + +R+  + AV   ++   A AR+ A   G YS +      R     A++ V + +       +RD+ ++LL  ++L  +V+ VL      GREMLKP NMA CSPRVFWSL                 D    AAL  L+P +DW+FL  R R LS KA E Q   +  + E  +E
Sbjct:    4 VRLRSPAK-SAVL--RIDSASSFQVFREQALNALGLAVSDGYTFKGGFPPKELHVED-DASMTSVVQNNDTVLIEPAPAAPRPGPATRSTTPNTPKTTSKSTPKTPPAPPRRTTTAAAKKAKRV-------PKPKFTGQGHVLGSTGQDVAESDAPAAPSPLLKRRKM-IQLGSKEDVGDKLVHAVSSHGGSSTTDKFLRSATKSAVNHQYEMTLANARLHAALVGNYSMQTLAPNAR---GVAQMRVRFLER---ARTWRDEQLDLLQPAELTSIVKYVLLSGGETGREMLKPFNMAQCSPRVFWSLARLS-------------DGDVAAALETLLPSEDWSFLGLRTRTLSAKALEAQTHSQYYRTEVPDE 345          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|675201603|ref|XP_008909686.1| (hypothetical protein, variant 8 [Phytophthora parasitica INRA-310] >gi|568090381|gb|ETN05216.1| hypothetical protein, variant 8 [Phytophthora parasitica INRA-310])

HSP 1 Score: 101.293 bits (251), Expect = 1.023e-18
Identity = 67/209 (32.06%), Postives = 106/209 (50.72%), Query Frame = 0
Query:  156 GENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQ 362
            GE   + RR   + ++++ED+ E+ L +   G   GR  +  RA  + AVE  ++   A +R+ A     Y  +     RR DGS A+L V + +    ++   + V+LL   +L  +++ VL      GREMLKP NMA  S RVFWS+   ++ +   G             L  LVP++DW+FL  R R +S+KA E +  EE+ +
Sbjct:   79 GEPQRKYRRSKAINLTSKEDV-EISLVNAVSGQSHGRAAKFFRAATKNAVEHQYEITLATSRLNAALAHNYEIEELSTTRRADGSAAKLRVRFKETP--RTWKEEIVDLLKTDELQAILKYVLISGGETGREMLKPFNMAQVSTRVFWSIARLYDGDVAVG-------------LADLVPDEDWSFLDARTRVMSEKAMEAKVNEEQYK 271          
BLAST of EWM28112.1 vs. NCBI_GenBank
Match: gi|675201595|ref|XP_008909682.1| (hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >gi|568090377|gb|ETN05212.1| hypothetical protein, variant 4 [Phytophthora parasitica INRA-310])

HSP 1 Score: 101.293 bits (251), Expect = 1.128e-18
Identity = 67/209 (32.06%), Postives = 106/209 (50.72%), Query Frame = 0
Query:  156 GENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAVFRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHKGHGFQSDYRDDVELLSQSQLLGVVRSVLAD--VDGREMLKPANMAGCSPRVFWSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDKAKENQAQEEELQ 362
            GE   + RR   + ++++ED+ E+ L +   G   GR  +  RA  + AVE  ++   A +R+ A     Y  +     RR DGS A+L V + +    ++   + V+LL   +L  +++ VL      GREMLKP NMA  S RVFWS+   ++ +   G             L  LVP++DW+FL  R R +S+KA E +  EE+ +
Sbjct:  131 GEPQRKYRRSKAINLTSKEDV-EISLVNAVSGQSHGRAAKFFRAATKNAVEHQYEITLATSRLNAALAHNYEIEELSTTRRADGSAAKLRVRFKETP--RTWKEEIVDLLKTDELQAILKYVLISGGETGREMLKPFNMAQVSTRVFWSIARLYDGDVAVG-------------LADLVPDEDWSFLDARTRVMSEKAMEAKVNEEQYK 323          
The following BLAST results are available for this feature:
BLAST of EWM28112.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110456|gb|EWM28112.1|0.000e+0100.00hypothetical protein Naga_100036g14 [Nannochlorops... [more]
gi|299473604|emb|CBN77999.1|4.142e-3140.91conserved unknown protein [Ectocarpus siliculosus][more]
gi|223996853|ref|XP_002288100.1|1.347e-2826.04predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|953499141|emb|CEG39453.1|2.738e-2528.50hypothetical protein PHALS_09699 [Plasmopara halst... [more]
gi|301117438|ref|XP_002906447.1|7.141e-2130.92conserved hypothetical protein [Phytophthora infes... [more]
gi|695375224|ref|XP_009515493.1|8.552e-2031.78hypothetical protein PHYSODRAFT_343759 [Phytophtho... [more]
gi|813164266|ref|XP_012203193.1|9.607e-2027.98hypothetical protein SPRG_08562 [Saprolegnia paras... [more]
gi|669149496|ref|XP_008610310.1|1.193e-1927.88hypothetical protein SDRG_06314 [Saprolegnia dicli... [more]
gi|675201603|ref|XP_008909686.1|1.023e-1832.06hypothetical protein, variant 8 [Phytophthora para... [more]
gi|675201595|ref|XP_008909682.1|1.128e-1832.06hypothetical protein, variant 4 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2569rna2569Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications