EWM28138.1, cds2545 (CDS) Nannochloropsis gaditana

Overview
NameEWM28138.1
Unique Namecds2545
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:654023..654025 -
Alignment locationCM002459.1:648968..653945 -
Alignment locationCM002459.1:648626..648804 -
Alignment locationCM002459.1:647553..648479 -
Alignment locationCM002459.1:646517..647416 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28138.1
Producttetratricopeptide repeat domain-containing protein
Orig transcript idgnl|cribi|Naga_100036g32.2558.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:654023..654025 -
CM002459.1supercontigCM002459.1:648968..653945 -
CM002459.1supercontigCM002459.1:648626..648804 -
CM002459.1supercontigCM002459.1:647553..648479 -
CM002459.1supercontigCM002459.1:646517..647416 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR013026TPR-contain_dom
IPR019786Zinc_finger_PHD-type_CS
IPR013083Znf_RING/FYVE/PHD
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
IPR001965Znf_PHD
Homology
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|585110482|gb|EWM28138.1| (tetratricopeptide repeat domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 4796.49 bits (12440), Expect = 0.000e+0
Identity = 2328/2328 (100.00%), Postives = 2328/2328 (100.00%), Query Frame = 0
Query:    1 MFSWASIQAVEPVEDTVDGQHPHTGQDHAEGRAGLVGPDMGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVSDEMLFRVRYLGTKNFAELLEKEGKISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISRGGSRGLSNEDQSFDEREADGVRPCAFHAKEGVSEASAPTILPVTLEADGESHAWLDLGRALLQVQESCCPRPLKVEAEVVFRSPSSAPNGHADDAGKPLGQGRRTARVTEAERMQQVSAGKEGADSCFHQPECSESGQQTVRGESGGGLGNGAGASQERGKSSGPPPSSVENDKGDAPTPHISVSKARRASRRGGRTSKDEEGAGKGEERSSERVREWMEANIFHGTMRNRDQGESNPLSDQTGHALDWWSDWGVAASWTPAPVGEEGPRSPSPAGQGGMFHAVASDEGAELVMHRLRPFKGTHNSLCDVCLDGGELICCETCSLVYHTCCLHSPPGMSEALYCDRCREEAYRLDDRQPPRVADHALLVDEIEEITGNFLPSVHGNLGALDVMRRLVMRLARVREPRVWSDGRLRGVALALEEACRSFARDIKGHVHHDSEPRVLDFGPAVELFLAELHMDELLIVGSARKEAMVLSGEALEKYKKMDTKTADSNDVSSEMIRERRFERSRRWPSPGPDSCYHEAACDLFIAKTIEALGIQTKSKGEKENNVVSGRWEPLEVEGEEETEREEKDEEVIFSEIYRCRFAWLRALLAAWRGDAQDAERFLTECQGHLEEVAKPDGSISLSHCQRNPRISLEALGTKRKELLQRNESGATRELATAFRKGVLRNAGNGSLEATRAFLSLVRRRYLCVHSEDGKSGSDGAASGLQQQHVIDELLADFLEYEAKGLMDTLKRVGGRTFAAVGTFCGAMDRLDAALEKHSSILMITLITCAKADDLLTAVRILHQILWHLLFVDHWGDKVVASYHQSLPAALAAQARSDLTRLNVLLLETLSHLLAMALRGGCPPFLVLSGDLCDALPSTLASLLRFSSLPYSRVIMNAAMDIFKAVTRRDGCKTSTSLALESTIRPTYSSLVERLEETMFRSLSGILCDPQLEPGFLQDYTNSTNARDYLFLSLHHFSNLMDENSTWAVHPEQGIKQLTRQQLWALTCSLQNLARMASEKDSLYGKTLFPCYLAQTFLVLEHPLLQGNDPTSIQSIRLDWMILMHGVLAEIGQCGEEGGRFLKLVLKVTGLCTRTPTADGDESLWSEESNVFKASVQCMRCLYGLDLSPNGTVEGHHTKSREPEGLSETMGLATFVVRYLEEAQVTVQRRKQMLTALLLAFDKEPMLQQPEVCSGLFPLIESFLFRGTVELETSYLSGDPTSTANTSSVRGIGDSAALVALLNESERLTVTAMEETEAVTPEQSSKCSEMSMLHLEKVKENGVVDSDALIYVYSHFYTYLTELSNTPRFLKRKGQSEAEAYAEYEAANLDLLQMHFLDLRFNPNRLEAWLGLTERAWSLYLMYLDHCPAGVNEDVRERGDNDYDARNVVSCFEQALYQTRECVDEEPSQDAGKDSSLVSIAPFLDIAFFEDVSGTEQGARVCYALDVMGLKHLLKPKNCELGEEELDVYWAALVVAVYRLLASRCLETLDGILKHRLEKDPSDQELATKRIEARVRLAMISYMRRYHKSAMGPHDFSLKRKDPEHMAVIATALRDFQAAQSMESRYGVRSLRWDIPFMIGRLLEETGRARHGRLTSYAKIELLEPGWMESFLSQFKRAQELAERSGNKMSRKEAFYRLHATRLKAILSDIQQVAGVSSLLPPCAHMLQLLRRYSVRDGEGKAEATDIPQKDCSAEQLSRIRWALLMDAMKAMALCRRFDSFDHRSIYQRARVSEHLFVFWPEEGGTDIEGPIRDGIDGKQDLSIPMKKALASSTQGKKARFSLVAASDLMYRLFEKKRTQIVAVWLAEECNNVYDLLNQRNLKYEATRRRYITYYVDLLERTNDCDRLFELYRNVRTLKDPTNDLLSWTQSRILECLTMVLDSGLPCAREDKGACEGASETKLTEETNMRCFEITYEVYLDLAEAVASTSGRRGTWQRETDRLAEQRKSLFLKLENVLVRHHDKSIGAAGAEDMMEESPQIAKSKTRPTGGALSLATTLAFCHEKWPEKQGRLKLAKTSQADVVVKVIRKAKSHRDTELPVEGLAAPQQRKDQIELSQEAKIDCMAEGPGDEKVEGGSFKRRRIFDACEDAEVEQDQYVTALRRDTVIEFLLDEADEI 2328
            MFSWASIQAVEPVEDTVDGQHPHTGQDHAEGRAGLVGPDMGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVSDEMLFRVRYLGTKNFAELLEKEGKISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISRGGSRGLSNEDQSFDEREADGVRPCAFHAKEGVSEASAPTILPVTLEADGESHAWLDLGRALLQVQESCCPRPLKVEAEVVFRSPSSAPNGHADDAGKPLGQGRRTARVTEAERMQQVSAGKEGADSCFHQPECSESGQQTVRGESGGGLGNGAGASQERGKSSGPPPSSVENDKGDAPTPHISVSKARRASRRGGRTSKDEEGAGKGEERSSERVREWMEANIFHGTMRNRDQGESNPLSDQTGHALDWWSDWGVAASWTPAPVGEEGPRSPSPAGQGGMFHAVASDEGAELVMHRLRPFKGTHNSLCDVCLDGGELICCETCSLVYHTCCLHSPPGMSEALYCDRCREEAYRLDDRQPPRVADHALLVDEIEEITGNFLPSVHGNLGALDVMRRLVMRLARVREPRVWSDGRLRGVALALEEACRSFARDIKGHVHHDSEPRVLDFGPAVELFLAELHMDELLIVGSARKEAMVLSGEALEKYKKMDTKTADSNDVSSEMIRERRFERSRRWPSPGPDSCYHEAACDLFIAKTIEALGIQTKSKGEKENNVVSGRWEPLEVEGEEETEREEKDEEVIFSEIYRCRFAWLRALLAAWRGDAQDAERFLTECQGHLEEVAKPDGSISLSHCQRNPRISLEALGTKRKELLQRNESGATRELATAFRKGVLRNAGNGSLEATRAFLSLVRRRYLCVHSEDGKSGSDGAASGLQQQHVIDELLADFLEYEAKGLMDTLKRVGGRTFAAVGTFCGAMDRLDAALEKHSSILMITLITCAKADDLLTAVRILHQILWHLLFVDHWGDKVVASYHQSLPAALAAQARSDLTRLNVLLLETLSHLLAMALRGGCPPFLVLSGDLCDALPSTLASLLRFSSLPYSRVIMNAAMDIFKAVTRRDGCKTSTSLALESTIRPTYSSLVERLEETMFRSLSGILCDPQLEPGFLQDYTNSTNARDYLFLSLHHFSNLMDENSTWAVHPEQGIKQLTRQQLWALTCSLQNLARMASEKDSLYGKTLFPCYLAQTFLVLEHPLLQGNDPTSIQSIRLDWMILMHGVLAEIGQCGEEGGRFLKLVLKVTGLCTRTPTADGDESLWSEESNVFKASVQCMRCLYGLDLSPNGTVEGHHTKSREPEGLSETMGLATFVVRYLEEAQVTVQRRKQMLTALLLAFDKEPMLQQPEVCSGLFPLIESFLFRGTVELETSYLSGDPTSTANTSSVRGIGDSAALVALLNESERLTVTAMEETEAVTPEQSSKCSEMSMLHLEKVKENGVVDSDALIYVYSHFYTYLTELSNTPRFLKRKGQSEAEAYAEYEAANLDLLQMHFLDLRFNPNRLEAWLGLTERAWSLYLMYLDHCPAGVNEDVRERGDNDYDARNVVSCFEQALYQTRECVDEEPSQDAGKDSSLVSIAPFLDIAFFEDVSGTEQGARVCYALDVMGLKHLLKPKNCELGEEELDVYWAALVVAVYRLLASRCLETLDGILKHRLEKDPSDQELATKRIEARVRLAMISYMRRYHKSAMGPHDFSLKRKDPEHMAVIATALRDFQAAQSMESRYGVRSLRWDIPFMIGRLLEETGRARHGRLTSYAKIELLEPGWMESFLSQFKRAQELAERSGNKMSRKEAFYRLHATRLKAILSDIQQVAGVSSLLPPCAHMLQLLRRYSVRDGEGKAEATDIPQKDCSAEQLSRIRWALLMDAMKAMALCRRFDSFDHRSIYQRARVSEHLFVFWPEEGGTDIEGPIRDGIDGKQDLSIPMKKALASSTQGKKARFSLVAASDLMYRLFEKKRTQIVAVWLAEECNNVYDLLNQRNLKYEATRRRYITYYVDLLERTNDCDRLFELYRNVRTLKDPTNDLLSWTQSRILECLTMVLDSGLPCAREDKGACEGASETKLTEETNMRCFEITYEVYLDLAEAVASTSGRRGTWQRETDRLAEQRKSLFLKLENVLVRHHDKSIGAAGAEDMMEESPQIAKSKTRPTGGALSLATTLAFCHEKWPEKQGRLKLAKTSQADVVVKVIRKAKSHRDTELPVEGLAAPQQRKDQIELSQEAKIDCMAEGPGDEKVEGGSFKRRRIFDACEDAEVEQDQYVTALRRDTVIEFLLDEADEI
Sbjct:    1 MFSWASIQAVEPVEDTVDGQHPHTGQDHAEGRAGLVGPDMGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVSDEMLFRVRYLGTKNFAELLEKEGKISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISRGGSRGLSNEDQSFDEREADGVRPCAFHAKEGVSEASAPTILPVTLEADGESHAWLDLGRALLQVQESCCPRPLKVEAEVVFRSPSSAPNGHADDAGKPLGQGRRTARVTEAERMQQVSAGKEGADSCFHQPECSESGQQTVRGESGGGLGNGAGASQERGKSSGPPPSSVENDKGDAPTPHISVSKARRASRRGGRTSKDEEGAGKGEERSSERVREWMEANIFHGTMRNRDQGESNPLSDQTGHALDWWSDWGVAASWTPAPVGEEGPRSPSPAGQGGMFHAVASDEGAELVMHRLRPFKGTHNSLCDVCLDGGELICCETCSLVYHTCCLHSPPGMSEALYCDRCREEAYRLDDRQPPRVADHALLVDEIEEITGNFLPSVHGNLGALDVMRRLVMRLARVREPRVWSDGRLRGVALALEEACRSFARDIKGHVHHDSEPRVLDFGPAVELFLAELHMDELLIVGSARKEAMVLSGEALEKYKKMDTKTADSNDVSSEMIRERRFERSRRWPSPGPDSCYHEAACDLFIAKTIEALGIQTKSKGEKENNVVSGRWEPLEVEGEEETEREEKDEEVIFSEIYRCRFAWLRALLAAWRGDAQDAERFLTECQGHLEEVAKPDGSISLSHCQRNPRISLEALGTKRKELLQRNESGATRELATAFRKGVLRNAGNGSLEATRAFLSLVRRRYLCVHSEDGKSGSDGAASGLQQQHVIDELLADFLEYEAKGLMDTLKRVGGRTFAAVGTFCGAMDRLDAALEKHSSILMITLITCAKADDLLTAVRILHQILWHLLFVDHWGDKVVASYHQSLPAALAAQARSDLTRLNVLLLETLSHLLAMALRGGCPPFLVLSGDLCDALPSTLASLLRFSSLPYSRVIMNAAMDIFKAVTRRDGCKTSTSLALESTIRPTYSSLVERLEETMFRSLSGILCDPQLEPGFLQDYTNSTNARDYLFLSLHHFSNLMDENSTWAVHPEQGIKQLTRQQLWALTCSLQNLARMASEKDSLYGKTLFPCYLAQTFLVLEHPLLQGNDPTSIQSIRLDWMILMHGVLAEIGQCGEEGGRFLKLVLKVTGLCTRTPTADGDESLWSEESNVFKASVQCMRCLYGLDLSPNGTVEGHHTKSREPEGLSETMGLATFVVRYLEEAQVTVQRRKQMLTALLLAFDKEPMLQQPEVCSGLFPLIESFLFRGTVELETSYLSGDPTSTANTSSVRGIGDSAALVALLNESERLTVTAMEETEAVTPEQSSKCSEMSMLHLEKVKENGVVDSDALIYVYSHFYTYLTELSNTPRFLKRKGQSEAEAYAEYEAANLDLLQMHFLDLRFNPNRLEAWLGLTERAWSLYLMYLDHCPAGVNEDVRERGDNDYDARNVVSCFEQALYQTRECVDEEPSQDAGKDSSLVSIAPFLDIAFFEDVSGTEQGARVCYALDVMGLKHLLKPKNCELGEEELDVYWAALVVAVYRLLASRCLETLDGILKHRLEKDPSDQELATKRIEARVRLAMISYMRRYHKSAMGPHDFSLKRKDPEHMAVIATALRDFQAAQSMESRYGVRSLRWDIPFMIGRLLEETGRARHGRLTSYAKIELLEPGWMESFLSQFKRAQELAERSGNKMSRKEAFYRLHATRLKAILSDIQQVAGVSSLLPPCAHMLQLLRRYSVRDGEGKAEATDIPQKDCSAEQLSRIRWALLMDAMKAMALCRRFDSFDHRSIYQRARVSEHLFVFWPEEGGTDIEGPIRDGIDGKQDLSIPMKKALASSTQGKKARFSLVAASDLMYRLFEKKRTQIVAVWLAEECNNVYDLLNQRNLKYEATRRRYITYYVDLLERTNDCDRLFELYRNVRTLKDPTNDLLSWTQSRILECLTMVLDSGLPCAREDKGACEGASETKLTEETNMRCFEITYEVYLDLAEAVASTSGRRGTWQRETDRLAEQRKSLFLKLENVLVRHHDKSIGAAGAEDMMEESPQIAKSKTRPTGGALSLATTLAFCHEKWPEKQGRLKLAKTSQADVVVKVIRKAKSHRDTELPVEGLAAPQQRKDQIELSQEAKIDCMAEGPGDEKVEGGSFKRRRIFDACEDAEVEQDQYVTALRRDTVIEFLLDEADEI 2328          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|168041576|ref|XP_001773267.1| (predicted protein [Physcomitrella patens] >gi|162675462|gb|EDQ61957.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 98.9821 bits (245), Expect = 9.595e-17
Identity = 67/195 (34.36%), Postives = 101/195 (51.79%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVSDEML-FRVRYLGTKNFAEL--LEKEGKISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISRGGSRGL 231
            +  T+EAQE+RL + Y +A+     GQ   A+  +Q +L +P    A V   +   R+RY   KN AE   ++  G   EA+D F +A  +D  D V+W  L TL    G    AR A+E G    P   W C+E L  +L  +GD SAC SV +R L+L  +HP  L+    ++ A  +G+  +++ + G RG 
Sbjct:   61 LAPTKEAQESRLTQMYGEALSHLQHGQIEKAQSLFQSILQDPISIKAQVRLRLCKSRLRYSALKNLAETFSMQGSGHHVEAVDCFLQAAAIDGKDVVLWNRLGTLSCALGNLNVARRAFEEGLRCSPR-HWSCMEKLVEILIAVGDESACLSVAKRLLKLSPSHPRALQ----IQHAIEQGT--SSVLKIGPRGF 248          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|831791529|ref|XP_012759743.1| (hypothetical protein SAMD00019534_033970 [Acytostelium subglobosum LB1] >gi|735994533|dbj|GAM20222.1| hypothetical protein SAMD00019534_033970 [Acytostelium subglobosum LB1])

HSP 1 Score: 94.7449 bits (234), Expect = 2.011e-15
Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 0
Query:   45 EAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVSDEMLFRVRYLGTKNFAELLEKEGKISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRR 212
            EAQE      Y +A+ A  +  Y+ A++ Y  LL  P + D       +  ++Y   KN A + E       AL  F +A DLD GD +VW ++  +  +   W  AR A+E      P + W  LE LA +L ++GD S C+ ++QR+L +DS++  +L L+  + R
Sbjct:   33 EAQEASNFATYERALRAQQKANYLEAQQHYLNLLHSPLLGDDPSITSAMQLLKYSTLKNLATIYESMDDKERALSYFVQAVDLDGGDLLVWFNIGRIASELSKWNVARVAFETALRMSP-SHWMSLERLAELLFIIGDTSCCKQIIQRSLSIDSSNSRMLLLYTALLR 199          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|108710460|gb|ABF98255.1| (expressed protein [Oryza sativa Japonica Group] >gi|113549399|dbj|BAF12842.1| Os03g0685700 [Oryza sativa Japonica Group] >gi|215694599|dbj|BAG89790.1| unnamed protein product [Oryza sativa Japonica Group])

HSP 1 Score: 93.5893 bits (231), Expect = 2.591e-15
Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVR----DADVSDEMLFRVRYLGTKNFAELLEKEGK--ISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALR 195
            +  T+EAQE+ L + Y + +    E  YV A+   + +L +P +     D  VSD+ L ++R+L  KN A +  ++G      AL  + +A +LD  D+VVW HL TL    G    +R+A+E+G    P  +W+C+E L  VL  + D  AC SV +  LR
Sbjct:   19 LAPTKEAQESALSQKYHEGLLKLQEKNYVKARELLEDVLKDPLISKIQADNIVSDQHLLQLRFLTLKNLASVFLQQGSAFYDNALRCYLQAVELDANDSVVWNHLGTLSCSMGLLSTSRWAFEQGLLCSPN-NWNCMEKLLEVLIAICDEVACLSVAKLILR 179          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|1002254735|ref|XP_015631635.1| (PREDICTED: uncharacterized protein LOC4333751 [Oryza sativa Japonica Group])

HSP 1 Score: 92.8189 bits (229), Expect = 7.926e-15
Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVR----DADVSDEMLFRVRYLGTKNFAELLEKEGK--ISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALR 195
            +  T+EAQE+ L + Y + +    E  YV A+   + +L +P +     D  VSD+ L ++R+L  KN A +  ++G      AL  + +A +LD  D+VVW HL TL    G    +R+A+E+G    P  +W+C+E L  VL  + D  AC SV +  LR
Sbjct:   19 LAPTKEAQESALSQKYHEGLLKLQEKNYVKARELLEDVLKDPLISKIQADNIVSDQHLLQLRFLTLKNLASVFLQQGSAFYDNALRCYLQAVELDANDSVVWNHLGTLSCSMGLLSTSRWAFEQGLLCSPN-NWNCMEKLLEVLIAICDEVACLSVAKLILR 179          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|1052199846|ref|XP_017701934.1| (PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199848|ref|XP_017701935.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199850|ref|XP_017701936.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199852|ref|XP_017701937.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199854|ref|XP_017701938.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199856|ref|XP_017701939.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199858|ref|XP_017701940.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199860|ref|XP_017701941.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199862|ref|XP_017701942.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera] >gi|1052199864|ref|XP_017701943.1| PREDICTED: uncharacterized protein LOC103722259 [Phoenix dactylifera])

HSP 1 Score: 92.0485 bits (227), Expect = 8.030e-15
Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADV----SDEMLFRVRYLGTKNFAELLEKEGKI--SEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISR 225
            +  T+EAQE  L + Y + +       Y  A+   + +L +P V +A +    SD  L ++R+L  KN A +  ++G +    AL  + +A ++D  D+VVW  L TL    G    +R+A+E+G    P  +W+C+E L  VL  +GD  AC SV    +R   +H   L +   +  A R    P  I +
Sbjct:   19 LAPTKEAQEFHLSQTYHEGLLMFQAKDYAKARELLEAVLKDPLVSNAQIDDNASDRHLLQLRFLSLKNLAAVFLQQGSMHYESALQCYLQAVEIDKNDSVVWNQLGTLSCTMGLISTSRWAFEQGLLCSPN-NWNCMEKLLEVLIAIGDEVACLSVANLLIRHWPSHSRALHVKNTIEDAERVPFAPHGIDK 209          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|695057694|ref|XP_009417134.1| (PREDICTED: uncharacterized protein LOC103997590 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 91.6633 bits (226), Expect = 1.982e-14
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVS----DEMLFRVRYLGTKNFAELLEKEGKI--SEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALR 195
            +  T+EAQE  L + Y + +       Y  A+   + +L +P +  A V     D  + ++R+L  KN A +  ++G I    AL  + +A +LD+ D+VVW HL TL  + G    +R+A+E+G    P  +W+C+E L  VL  +GD  AC SV    LR
Sbjct:   19 LAPTKEAQEFHLSQTYHEGLLKLQAKDYGKARELLESVLRDPLISSAQVGNVPGDRHMLQLRFLSLKNLASVFLQQGPIYYENALQCYLQAVELDENDSVVWNHLGTLSCKMGLLSTSRWAFEQGLLCSPN-NWNCMEKLLEVLIAIGDEVACLSVANLILR 179          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|302817024|ref|XP_002990189.1| (hypothetical protein SELMODRAFT_428704 [Selaginella moellendorffii] >gi|300142044|gb|EFJ08749.1| hypothetical protein SELMODRAFT_428704 [Selaginella moellendorffii])

HSP 1 Score: 91.2781 bits (225), Expect = 2.585e-14
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEP-RVRDADVSDEMLFRVRYLGTKNFAELLEKEGK--ISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLEL 206
            +  T+EAQE+ L + Y  A+ +   G    A+  +Q ++ +P  ++      + +  +R+L  +N AE   K+G    +E L  + +A  +DD D V+W  L TL    G    AR A+E+G    P   W C+E L  VL  +GD + C SV++R L+   +HP  L +
Sbjct:   20 LAPTKEAQESHLTKLYQDALSSLQSGDLANARSLFQAIIQDPLSIKSQRGKSDAMLHLRFLTYRNLAETYVKQGPEFSAEGLHYYLQAVAIDDKDVVLWNRLGTLACSLGKLNIARKAFEQGLHCSPR-HWSCMEKLVEVLIAIGDETGCISVVKRLLKFHPSHPRALHI 188          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|302821673|ref|XP_002992498.1| (hypothetical protein SELMODRAFT_430665 [Selaginella moellendorffii] >gi|300139700|gb|EFJ06436.1| hypothetical protein SELMODRAFT_430665 [Selaginella moellendorffii])

HSP 1 Score: 91.2781 bits (225), Expect = 2.585e-14
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEP-RVRDADVSDEMLFRVRYLGTKNFAELLEKEGK--ISEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLEL 206
            +  T+EAQE+ L + Y  A+ +   G    A+  +Q ++ +P  ++      + +  +R+L  +N AE   K+G    +E L  + +A  +DD D V+W  L TL    G    AR A+E+G    P   W C+E L  VL  +GD + C SV++R L+   +HP  L +
Sbjct:   20 LAPTKEAQESHLTKLYQDALSSLQSGDLANARSLFQAIIQDPLSIKSQRGKSDAMLHLRFLTYRNLAETYVKQGPEFSAEGLHYYLQAVAIDDKDVVLWNRLGTLACSLGKLNIARKAFEQGLHCSPR-HWSCMEKLVEVLIAIGDETGCISVVKRLLKFHPSHPRALHI 188          
BLAST of EWM28138.1 vs. NCBI_GenBank
Match: gi|769815052|ref|XP_006841951.2| (uncharacterized protein LOC18431771 [Amborella trichopoda])

HSP 1 Score: 90.1225 bits (222), Expect = 6.205e-14
Identity = 58/192 (30.21%), Postives = 97/192 (50.52%), Query Frame = 0
Query:   40 MGETREAQETRLVEAYSKAVEAHVEGQYVPAKRAYQLLLDEPRVRDADVS----DEMLFRVRYLGTKNFAELLEKEGKI--SEALDAFSRATDLDDGDAVVWLHLATLCEQQGFWRAARYAYERGPGPGPTASWDCLEGLARVLEVLGDWSACQSVLQRALRLDSNHPGLLELWFRVRRAWRRGSLPAAISR 225
            +  T+EAQE  L + Y + +      +Y  A+R ++ +L +P + +A V     D  L ++R+L  KN A +  ++G +    A++ + +A ++D  D+VVW  L TL    G    AR+A+E+G    P  +W+C+E L  VL  +GD  +C SV    LR   +H   L +   +  + R    P  I R
Sbjct:   19 LAPTKEAQEFHLTQEYHEGLLQLQAKEYSKAQRNFEAVLRDPLMSNAQVDGNTRDGHLLQLRFLALKNLATVFLEQGSMHYESAINCYLQAVEIDTKDSVVWNQLGTLSCYIGLLSIARWAFEQGLSCSPN-NWNCMEKLLEVLIAIGDEISCLSVANLILRNWPSHARALLVKTVIEESERIPFAPRGIDR 209          
The following BLAST results are available for this feature:
BLAST of EWM28138.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110482|gb|EWM28138.1|0.000e+0100.00tetratricopeptide repeat domain-containing protein... [more]
gi|168041576|ref|XP_001773267.1|9.595e-1734.36predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|831791529|ref|XP_012759743.1|2.011e-1532.14hypothetical protein SAMD00019534_033970 [Acytoste... [more]
gi|108710460|gb|ABF98255.1|2.591e-1534.57expressed protein [Oryza sativa Japonica Group] >g... [more]
gi|1002254735|ref|XP_015631635.1|7.926e-1534.57PREDICTED: uncharacterized protein LOC4333751 [Ory... [more]
gi|1052199846|ref|XP_017701934.1|8.030e-1530.21PREDICTED: uncharacterized protein LOC103722259 [P... [more]
gi|695057694|ref|XP_009417134.1|1.982e-1433.33PREDICTED: uncharacterized protein LOC103997590 [M... [more]
gi|302817024|ref|XP_002990189.1|2.585e-1431.18hypothetical protein SELMODRAFT_428704 [Selaginell... [more]
gi|302821673|ref|XP_002992498.1|2.585e-1431.18hypothetical protein SELMODRAFT_430665 [Selaginell... [more]
gi|769815052|ref|XP_006841951.2|6.205e-1430.21uncharacterized protein LOC18431771 [Amborella tri... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2553rna2553Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications