EWM30421.1, cds252 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|585113082|gb|EWM30421.1| (tim21-like mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MTGVLYFLFPYWKMNKEAPALLPWMLTPPFLLKYRISDTSAMTSLVTVMSKAAGPCTRRVLPMSVGGTGRRPLTSRARPCLNYAADTMRGTLVSRRLLVRHEPSSLVGRLLGARGNGCARRSGVWLGPDGRGGHSLQLVCKASLSSKKGGPKEGEGREEAETEREKQKQQEEEPIHDDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALIQSGGSQR 353
MTGVLYFLFPYWKMNKEAPALLPWMLTPPFLLKYRISDTSAMTSLVTVMSKAAGPCTRRVLPMSVGGTGRRPLTSRARPCLNYAADTMRGTLVSRRLLVRHEPSSLVGRLLGARGNGCARRSGVWLGPDGRGGHSLQLVCKASLSSKKGGPKEGEGREEAETEREKQKQQEEEPIHDDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALIQSGGSQR
Sbjct: 1 MTGVLYFLFPYWKMNKEAPALLPWMLTPPFLLKYRISDTSAMTSLVTVMSKAAGPCTRRVLPMSVGGTGRRPLTSRARPCLNYAADTMRGTLVSRRLLVRHEPSSLVGRLLGARGNGCARRSGVWLGPDGRGGHSLQLVCKASLSSKKGGPKEGEGREEAETEREKQKQQEEEPIHDDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALIQSGGSQR 353
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|1210531626|dbj|GAX09982.1| (hypothetical protein FisN_11Lh026 [Fistulifera solaris]) HSP 1 Score: 167.548 bits (423), Expect = 2.226e-46 Identity = 82/167 (49.10%), Postives = 117/167 (70.06%), Query Frame = 0
Query: 183 GEKIGFMRGLA-YLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNR-AMYEAMSKSASPEERAALQALI 346
GEK+ L YL +A+ AA Y+I EL+P++MS N +F+ +F++++ + E++ +YGE +K YGRD GG REGRRNFVEH YV +DGSKR R+R+N+EG FG+AF FAEV+ MP G+++Y+LVQD GRV T+ DNR AM A + S E ++A+ L+
Sbjct: 76 GEKVVAATRLGWYLGLASFAAACAYYIGKELIPTKMSPNRVFDRSFEIIRKHPEIIRQYGESVKAYGRDHGGHREGRRNFVEHTEYVSPDDGSKRTRVRYNLEGRFGNAFCFAEVSNQMPSGEFVYILVQDKSNGRVQTIVDNRAAMTAARLTAGSKEAQSAMSQLL 242
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|1210526863|dbj|GAX14511.1| (hypothetical protein FisN_11Hh026 [Fistulifera solaris]) HSP 1 Score: 165.622 bits (418), Expect = 9.058e-46 Identity = 78/155 (50.32%), Postives = 112/155 (72.26%), Query Frame = 0
Query: 194 YLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNR-AMYEAMSKSASPEERAALQALI 346
YL +A+ AA Y+I EL+P++MS N +F+ +F++++ + E++ +YGE +K YGRD GG REGRRNFVEH YV +DGSKR R+R+N+EG FG+AF FAEV+ MP G+++Y+LVQD GRV T+ DNR AM A + S E ++A+ L+
Sbjct: 87 YLGLASFAAACAYYIGKELIPTKMSPNRVFDRSFEIIRKDPEIIRQYGESVKAYGRDHGGHREGRRNFVEHTEYVSPDDGSKRTRVRYNLEGRFGNAFYFAEVSNQMPSGEFVYILVQDKSNGRVQTIVDNRAAMTAARLTAGSKEAQSAMSQLL 241
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|299470181|emb|CBN78209.1| (Mitochondrial import inner membrane translocase TIM21-like protein [Ectocarpus siliculosus]) HSP 1 Score: 161.384 bits (407), Expect = 1.527e-44 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 0
Query: 177 DDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGE-DGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALI 346
D PE EKI ++ +A + V + +L + EL PS M+ + + A DV +A+ + N +G PLKGYGRD REGRRNFVEH ++ D SKR R+RFN+EGP GH +AEV+ M G+W+YL VQD+QTG V+TL DNRA+ A +++ S EE+ A + ++
Sbjct: 33 DYEPEPEEKISIVKTVAGVCVLGLVVAALSATITELWPSHMAPQSIMSHAHDVFQADPDTANHFGTPLKGYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSNKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKNAFRKML 203
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|219109654|ref|XP_002176581.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411116|gb|EEC51044.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.77 bits (408), Expect = 2.721e-44 Identity = 88/191 (46.07%), Postives = 122/191 (63.87%), Query Frame = 0
Query: 165 EKQKQQEEEPIHDDPPEEGEKIGFMRGLA-YLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYV-GEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDN-RAMYEAMSKSASPEERAALQALIQSGGSQ 352
EK+K + E+ + G+K+ L + +A AA Y+I EL P++MS N +F+ +F ++A+ EV RYG+ LK YGRD GG REGRRNF+EH Y EDGSKR R+R+N+EG FG AFVFAEV+A MP G+++Y+LVQD GRV T+ DN A+ A S S E ++A+ L+ GG +
Sbjct: 55 EKKKSEGEDTTSEIVLTPGQKVVEASRLTMWGGIAVFAACCAYYIGRELFPTKMSPNRVFDRSFAAIRADSEVQRRYGDNLKAYGRDHGGHREGRRNFIEHTEYTDAEDGSKRTRVRYNLEGRFGTAFVFAEVSASMPSGEFVYILVQDKSNGRVHTVVDNRAALTAARLASGSKEAQSAMSQLLGGGGQK 245
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|223999159|ref|XP_002289252.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974460|gb|EED92789.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.073 bits (401), Expect = 1.191e-42 Identity = 74/148 (50.00%), Postives = 106/148 (71.62%), Query Frame = 0
Query: 206 YFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALIQSGGSQ 352
Y+I EL+P++MS N +F++A +++ N EV R+GE K YGRD GG REGRRNF+EH YV +DG+KR R+RFN+EG +G+AFVFAEV+ DMP G+++YLLVQD + G+V+T+ DNR+ A + +E A + A + GG +
Sbjct: 149 YYIGKELIPTKMSPNNVFDKATSIIRENAEVKRRFGEAFKTYGRDHGGHREGRRNFIEHTEYVSPDDGTKRTRVRFNLEGQYGNAFVFAEVSKDMPSGEFVYLLVQDKRNGQVITVVDNRSALLAKRMAGGSQEGADVFANLLGGGKK 296
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|397623111|gb|EJK66897.1| (hypothetical protein THAOC_12135 [Thalassiosira oceanica]) HSP 1 Score: 153.295 bits (386), Expect = 5.655e-41 Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 0
Query: 206 YFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRA 325
Y+I EL+P++MS N F+ A ++ N EV R+GE K YGRD GG REGRRNF+EH Y EDG+KR R+RFN+EG +G AFVFAEV+ +M G+++Y+LVQD + G V+T++DNRA
Sbjct: 101 YYIGKELLPTKMSPNTTFDRATSAIRQNEEVKRRFGEGFKTYGRDHGGHREGRRNFIEHTEYTAEDGTKRTRVRFNLEGQYGSAFVFAEVSNEMASGEFVYILVQDKRNGAVITVQDNRA 220
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|301094038|ref|XP_002997863.1| (transmembrane protein, putative [Phytophthora infestans T30-4] >gi|262109786|gb|EEY67838.1| transmembrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 147.902 bits (372), Expect = 3.802e-39 Identity = 71/153 (46.41%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 194 YLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALI 346
+L + + A +YF+ EL+P+RMS N LF+E+ D + N +V +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV M K +++YL+VQ +TG ++ + DNR + A +K EE+ AL+ L+
Sbjct: 79 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGYDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKGMKKNEYVYLIVQVTKTGELLKIIDNRQILSAETK----EEQDALRQLL 227
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|1072236581|gb|OEU21309.1| (hypothetical protein FRACYDRAFT_206320 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 148.288 bits (373), Expect = 7.000e-39 Identity = 85/220 (38.64%), Postives = 128/220 (58.18%), Query Frame = 0
Query: 131 RGGHSLQLVCKASLSSKKGGPKEGEGREEAETEREKQKQQEEEPIHDDPPEEGEKIGFMRGLA-YLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEP-LKGYGRDGGGRREGRRNFVEHKNYVGE-DGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERA-ALQALI 346
R H+L + LSS G +E T++ + + GEK+ L + + A A+ Y+I EL+P++MS N +F++A ++ N +V +YG+ +K YG+D GG REGRRNF+EH Y E DGSKR R+RFN+EG F AF FAEV+ +M G+++Y+LVQD ++GRV+T+ DNRA A S + +E A A++ L+
Sbjct: 32 RQNHNLSKQILSPLSSTIGLRSLSNKAKEETTKKNNDTADADTETSELVLTPGEKVAAASRLTMWAGIFAFASVCAYYIGKELIPTKMSPNTVFSKACKTIRDNSQVKLKYGDSSIKFYGKDHGGHREGRRNFIEHTQYNNEEDGSKRTRVRFNMEGQFASAFCFAEVSNEMSSGEFVYILVQDKKSGRVITVVDNRAALTAKRMSGNNQESAEAMKKLL 251
BLAST of EWM30421.1 vs. NCBI_GenBank
Match: gi|1173956320|gb|OQS03131.1| (transmembrane protein [Thraustotheca clavata]) HSP 1 Score: 142.51 bits (358), Expect = 4.085e-37 Identity = 88/203 (43.35%), Postives = 122/203 (60.10%), Query Frame = 0
Query: 148 KGGPKEGEGREEAETEREKQKQQEEEPIHDDPPEE---GEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSK-RLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALI 346
K P +G + EA+T+ I P E+ G ++G G+ L +A + YFIV EL PSRMS N LF+EA D+V N VL R G P++ YGRD GG +EGRRNF+EH +DG K RLRI+FN++GP G A +AE A+M KG+++YL+VQ TG ++ + DNR + +A S+ EER AL+ L+
Sbjct: 43 KPNPAQGGAQAEAQTD----------AIVLTPYEKVAAGTQMGMWAGI--LGLATVCG---YFIVRELFPSRMSPNSLFSEASDIVLQNDMVLQRLGAPIRCYGRDHGGHKEGRRNFIEHVELNDKDGQKTRLRIKFNMKGPNGKAQCWAETNANMKKGEYVYLIVQTY-TGEIIKIHDNRQILQAESE----EERDALKRLL 225 The following BLAST results are available for this feature:
BLAST of EWM30421.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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