EWM28148.1, cds2518 (CDS) Nannochloropsis gaditana

Overview
NameEWM28148.1
Unique Namecds2518
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:588233..588416 -
Alignment locationCM002459.1:587783..588033 -
Alignment locationCM002459.1:587656..587697 -
Alignment locationCM002459.1:586653..587564 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28148.1
Productdecaprenyl-diphosphate synthase subunit 1
Orig transcript idgnl|cribi|Naga_100004g170.9079.mrna
GeneGPPS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:588233..588416 -
CM002459.1supercontigCM002459.1:587783..588033 -
CM002459.1supercontigCM002459.1:587656..587697 -
CM002459.1supercontigCM002459.1:586653..587564 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR017446Polyprenyl_synth-rel
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Homology
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|585110493|gb|EWM28148.1| (decaprenyl-diphosphate synthase subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0
Query:    1 MPAPRKVGLRRLRGLVQSCSTGFRGGVQPSLISSRTAISYVNRAVDHIYYSHASIGSTTNIVHRSIRSGWAKTAADASIDVIVNAVTRPEIDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPRPRYNSSYLGTLL 462
            MPAPRKVGLRRLRGLVQSCSTGFRGGVQPSLISSRTAISYVNRAVDHIYYSHASIGSTTNIVHRSIRSGWAKTAADASIDVIVNAVTRPEIDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPRPRYNSSYLGTLL
Sbjct:    1 MPAPRKVGLRRLRGLVQSCSTGFRGGVQPSLISSRTAISYVNRAVDHIYYSHASIGSTTNIVHRSIRSGWAKTAADASIDVIVNAVTRPEIDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPRPRYNSSYLGTLL 462          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|695436953|ref|XP_009532096.1| (hypothetical protein PHYSODRAFT_336262 [Phytophthora sojae] >gi|348671943|gb|EGZ11763.1| hypothetical protein PHYSODRAFT_336262 [Phytophthora sojae])

HSP 1 Score: 357.066 bits (915), Expect = 6.075e-116
Identity = 187/352 (53.12%), Postives = 238/352 (67.61%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDLQR---KPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREM 439
            +DEPTV +  P      A  + E+  DL+LD  +   +  + L       +   DPF +VE DM S++  IK +LGSDHPVLEA A+YFFE DGGKK+RPTMVLL++R   AH  A G         T        +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ +       +    +     EYYL KN+YKTGSLM+NSC+AA++L    + + +  FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA   FP  + ++ KRKF+ EGD+E   E+
Sbjct:   50 VDEPTVSILHPAPGYALAGSSPEVHRDLSLDFDKSVSEMEVPLAYLPTDPSTLADPFTLVEQDMVSVTESIKRILGSDHPVLEAVARYFFEHDGGKKVRPTMVLLVARTAEAHRRATGA----PLPETQSEEYTRAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQMK-------NADARDDITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDERICDLGFAFGRHIGLAFQLIDDVLDYEGVN--TGKPLLADLKSGLSTAPLLLAQEEFP-VLRELAKRKFSKEGDIEMASEL 387          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|299115852|emb|CBN74415.1| (geranyl-diphosphate synthase [Ectocarpus siliculosus])

HSP 1 Score: 354.369 bits (908), Expect = 3.428e-114
Identity = 198/374 (52.94%), Postives = 245/374 (65.51%), Query Frame = 0
Query:   72 KTAADASIDVIVNAVTRPEI----DEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPL--PSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREM 439
            +TA +  ID +VN      +    D PTV+V                 +D   D+    R          A G DPF++V +++  LS GIKSL+G++H VL A AKYFFELDGGKKIRPTMV+L+S+A  ++        S+      +  T L  P Q RLAEITEMIH ASLFHDDVIDEAD RRGVPS+NK++GNK+AILAGDFLLAR+S+SLARLR++E VEL+S  IEHLVKGEV+Q RP          E+G  A EYY+ KN+YKTGSLMANSC+A+ +L      +Q  AF YG+ VGLAFQLVDD+LDFE  + TLGKPALNDLRQGLATAPVLLAA   P  +  ++ RKF   GDV+   E+
Sbjct:  128 ETATNHCIDRVVNGGLDGSVPVDKDTPTVEV-----------------QDFVYDIDFAQRPS--GASQSLADGPDPFELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMVILMSQACNSN--------SQQVRPDVQPGTELVNPLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVLQMRPT---------EDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQPG-LAKLISRKFRGPGDVDEALEL 464          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|301091604|ref|XP_002895983.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 350.132 bits (897), Expect = 1.669e-113
Identity = 195/371 (52.56%), Postives = 245/371 (66.04%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWA----GAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLP----------SQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMT 447
            +DEPTV + +P      A    EL  +L+LD   +P  ++    A     ++   DPF +VE DM S++  IK +LGSDHPVL A A+YFFE DGGKK+RPTMVLL+SRA  AH  A              + TPLP          +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SV LARLRN+E VEL+ST IEHLVKGEVMQ +       +    +  +  EYYL KN+YKTGSLM+NSC+AA+ L      + +  FA+GRH+GLAFQL+DDVLD+E   ET GKP L DL+ GL+TAP+LLA   FP  + ++ KRKFA EGD+E   E+   S  +T
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFD-QPMDNVGVPLAYLPTDSSNLADPFTLVEQDMVSVNHSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRA--------------TDTPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVLLARLRNLEAVELMSTSIEHLVKGEVMQMK-------NADARDDISPFEYYLRKNYYKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGV-ET-GKPFLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAQEGDIEMASELVEKSSGIT 395          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|1173943641|gb|OQR92468.1| (hypothetical protein THRCLA_08695 [Thraustotheca clavata])

HSP 1 Score: 345.895 bits (886), Expect = 5.506e-112
Identity = 187/363 (51.52%), Postives = 238/363 (65.56%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWA--GAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAA-LEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPR 450
            +DEPT+ + +P      A        DL  D  R    + +            DPF++++  + S+S  IK++LGSDHPVLEA AKYFFE DGGKKIRPTM+LL+S+A  A       + S  + S S        Q+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R           +NGQ    EYYL KN+YKTGSLMANSCRAA++L      +    FAYGRH+GLAFQL+DDVLD++   E  GKP L DL+ GLATAPVLLA   FP  + D+V RKF++ GD+E   E+   S+ +   +
Sbjct:   46 VDEPTLSILDPAPGFTAATAHRSF--DLMSDFDRLQNGEAIVNCTHINTPMESDPFELIKDKIVSVSESIKTILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEAARDVDNTDKSIEYISAS--------QQRLAEITEMIHTASLLHDDVIDEADTRRGMKSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMR--------HADKNGQITPFEYYLRKNYYKTGSLMANSCRAALVLGEHSSEVCELGFAYGRHLGLAFQLIDDVLDYK--GENTGKPMLADLKAGLATAPVLLAQEEFP-VLKDLVARKFSNSGDIELAAELVEKSVGLQKSK 387          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|673032592|ref|XP_008870257.1| (solanesyl diphosphate synthase [Aphanomyces invadans] >gi|574474257|gb|ETW01259.1| solanesyl diphosphate synthase [Aphanomyces invadans])

HSP 1 Score: 345.125 bits (884), Expect = 1.174e-111
Identity = 190/370 (51.35%), Postives = 248/370 (67.03%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKA--DQAGELEEDLALDLQ--------RKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPR 450
            +DEPT+ + +P      A  +++  L ++  L +         R+P              VDPF +V+  + S+SA IK +LGSDHPVLEA AKYFFE DGGKKIRPTM+LL+S+A    A A  + G   F  ++E      SQ+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R     D SG      +  EYYL KN+YKTGSLMANSC+A+++L    D +    FAYGRH+GLAFQL+DDVLD+  + +  GKP L DL+ GLATAPVLLA   FP  + ++V RKF+SEGD+E   ++   S+ +   +
Sbjct:   48 VDEPTLSILDPSPGFTAAMRERSFNLVDNFDLPINGSHSTQHIRQPM------------NVDPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQA----AEADRLAGQSTFPKSAEYIAA--SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRH---ADKSG----AISPFEYYLRKNYYKTGSLMANSCKASLVLGDHTDRVCELGFAYGRHLGLAFQLIDDVLDY--SGQNTGKPMLADLKAGLATAPVLLAQEEFP-VLKELVARKFSSEGDIELAADLVEKSVGLQKSK 389          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|675186721|ref|XP_008902245.1| (hypothetical protein PPTG_09126 [Phytophthora parasitica INRA-310] >gi|566028958|gb|ETI51869.1| hypothetical protein F443_04881 [Phytophthora parasitica P1569] >gi|567966307|gb|ETK91759.1| hypothetical protein L915_04748 [Phytophthora parasitica] >gi|567998316|gb|ETL48391.1| hypothetical protein L916_02005 [Phytophthora parasitica] >gi|568024257|gb|ETL98297.1| hypothetical protein L917_04595 [Phytophthora parasitica] >gi|568054705|gb|ETM51484.1| hypothetical protein L914_04700 [Phytophthora parasitica] >gi|568097512|gb|ETN12254.1| hypothetical protein PPTG_09126 [Phytophthora parasitica INRA-310] >gi|570332673|gb|ETO80621.1| hypothetical protein F444_04919 [Phytophthora parasitica P1976] >gi|570956666|gb|ETP21651.1| hypothetical protein F441_04878 [Phytophthora parasitica CJ01A1] >gi|570991900|gb|ETP49543.1| hypothetical protein F442_04948 [Phytophthora parasitica P10297])

HSP 1 Score: 338.576 bits (867), Expect = 6.285e-109
Identity = 186/362 (51.38%), Postives = 237/362 (65.47%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDL-QRKPRLDLLAGW--AGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLP----------SQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREM 439
            +DEPTV + +P      A    EL  +L+LD  Q    +D+   +         DPF +V+ DM +++  IK +LGSDHPVL A A+YFFE DGGKK+RPTMVLL++RA                       TPLP          +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ +       +    +  +  EYYL KN+YKTGSLM+NSC+AA++L      + +  FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA   FP  + ++ KRKFA EGD+E   E+
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFDQPMGNVDVPLAYLPIDPINLADPFTLVKQDMVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVARAAE--------------AHRRAMDTPLPETQSEEYTHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQMK-------NADARDDISPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVNT--GKPLLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAKEGDIEMASEL 387          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|970636782|gb|KUF81147.1| (hexaprenyl pyrophosphate synthase [Phytophthora nicotianae])

HSP 1 Score: 337.806 bits (865), Expect = 1.109e-108
Identity = 186/359 (51.81%), Postives = 236/359 (65.74%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDL-QRKPRLDLLAGW--AGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLP----------SQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERV 436
            +DEPTV + +P      A    EL  +L+LD  Q    +D+   +         DPF +V+ DM +++  IK +LGSDHPVL A A+YFFE DGGKK+RPTMVLL++RA                       TPLP          +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ +       +    +  +  EYYL KN+YKTGSLM+NSC+AA++L      + +  FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA   FP  + ++ KRKFA EGD+E V
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFDQPMGNVDVPLAYLPIDPINLADPFTLVKQDMVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVARAAE--------------AHRRAMDTPLPETQSEEYTHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQMK-------NADARDDISPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVNT--GKPLLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAKEGDIEMV 384          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|953498183|emb|CEG40354.1| (geranylgeranyl diphosphate synthase [Plasmopara halstedii])

HSP 1 Score: 337.035 bits (863), Expect = 1.514e-108
Identity = 187/365 (51.23%), Postives = 241/365 (66.03%), Query Frame = 0
Query:   91 IDEPTVKVAEP------RRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLP----------SQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREM 439
            +DEPTV + +P        ++      G++E  LA  L   P           ++  DPF++V  D+ +++  IK +LGSDHPVL A A+YFFE DGGKK+RPTMVLL+SRA  AH         R  TST     PLP          +Q+RLAEITEMIHTASL HDDVID+A+ RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN++ VEL+ST IEHLVKGEVMQ +       +    +     EYYL KN+YKTGSLM+NSC+AA++L    + + +  FAYGRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA   FP  + ++ KRKFA EGDV+   E+
Sbjct:   45 VDEPTVSILQPAPGYALTGSLDVNKPMGDVEVPLAY-LHTDP-----------SKLNDPFQLVAQDIVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAH---------RRITST-----PLPEMQSKEYTLAAQQRLAEITEMIHTASLMHDDVIDDAETRRGQPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLQAVELMSTSIEHLVKGEVMQMK-------NADTRDDITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDEHICDLGFAYGRHIGLAFQLIDDVLDYEGVNT--GKPLLADLKSGLSTAPLLLAQEEFP-VLRELAKRKFAWEGDVKLASEL 373          
BLAST of EWM28148.1 vs. NCBI_GenBank
Match: gi|698780019|ref|XP_009823053.1| (hypothetical protein H257_01501 [Aphanomyces astaci] >gi|574122714|gb|ETV88190.1| hypothetical protein H257_01501 [Aphanomyces astaci])

HSP 1 Score: 336.65 bits (862), Expect = 2.557e-108
Identity = 189/366 (51.64%), Postives = 244/366 (66.67%), Query Frame = 0
Query:   91 IDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAAR------GVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVREMAFFSIAMTSPR 450
            +DEPT+ + +P      A +        + +L     L L+ G A + R       VDPF +V+  + S+SA IK +LGSDHPVLEA AKYFF+ DGGKKIRPTM+LL+S+A    A A  V     F  + E      SQ+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R     D  GT     +  EYYL KN+YKTGSLMANSC+A+++L    D +    FAYGRH+GLAFQL+DDVLD+  + +  GKP L DLR GLATAPVLLA   FP  + ++V R F+ EGD++   ++   S+ +   +
Sbjct:   49 VDEPTMSILDPSPGFTAALRTR------SFNLADSYDLPLIHG-ARSTRHISDPVTVDPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFDNDGGKKIRPTMILLVSQA----AEADRVADQSTFPKSPEYIAA--SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRH---ADKGGT----ISPFEYYLRKNYYKTGSLMANSCKASLVLGDHSDRVCELGFAYGRHLGLAFQLIDDVLDY--SGQNTGKPMLADLRAGLATAPVLLAQEEFP-VLKELVARNFSLEGDIDLAADLVEKSVGLQKSK 391          
The following BLAST results are available for this feature:
BLAST of EWM28148.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110493|gb|EWM28148.1|0.000e+0100.00decaprenyl-diphosphate synthase subunit 1 [Nannoch... [more]
gi|695436953|ref|XP_009532096.1|6.075e-11653.13hypothetical protein PHYSODRAFT_336262 [Phytophtho... [more]
gi|299115852|emb|CBN74415.1|3.428e-11452.94geranyl-diphosphate synthase [Ectocarpus siliculos... [more]
gi|301091604|ref|XP_002895983.1|1.669e-11352.56conserved hypothetical protein [Phytophthora infes... [more]
gi|1173943641|gb|OQR92468.1|5.506e-11251.52hypothetical protein THRCLA_08695 [Thraustotheca c... [more]
gi|673032592|ref|XP_008870257.1|1.174e-11151.35solanesyl diphosphate synthase [Aphanomyces invada... [more]
gi|675186721|ref|XP_008902245.1|6.285e-10951.38hypothetical protein PPTG_09126 [Phytophthora para... [more]
gi|970636782|gb|KUF81147.1|1.109e-10851.81hexaprenyl pyrophosphate synthase [Phytophthora ni... [more]
gi|953498183|emb|CEG40354.1|1.514e-10851.23geranylgeranyl diphosphate synthase [Plasmopara ha... [more]
gi|698780019|ref|XP_009823053.1|2.557e-10851.64hypothetical protein H257_01501 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2526rna2526Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications