EWM28158.1, cds2513 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|585110503|gb|EWM28158.1| (trna (guanine-n -)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MADILETHESRSGGSMKRPWVPPKFVQEALGHLPLVEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINASRRRWPVWSSDEEKHEEE 292
MADILETHESRSGGSMKRPWVPPKFVQEALGHLPLVEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINASRRRWPVWSSDEEKHEEE
Sbjct: 1 MADILETHESRSGGSMKRPWVPPKFVQEALGHLPLVEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINASRRRWPVWSSDEEKHEEE 292
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|1173954220|gb|OQS01700.1| (tRNA (guanine-N(7)-)-methyltransferase [Achlya hypogyna]) HSP 1 Score: 318.931 bits (816), Expect = 1.847e-106 Identity = 149/240 (62.08%), Postives = 184/240 (76.67%), Query Frame = 0
Query: 36 VEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEA---SPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEET-LAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
VE PQK+FYRSRAHCNPLSHND+ +YP P +M+WS YP + P V FLDVGCGFGGLT+AL+ LFP+ + LA+EIR KV E+VRLRI+ +R++A + +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRIV+ LLTEYAYL+ EGGILY ITDVE+LH WHVAK H FER+ +E L D V A+T ETEE KKV R+GG+KY V+RR PDA V
Sbjct: 11 VEIAGMPQKKFYRSRAHCNPLSHNDSFDYPLRPSEMDWSTHYPNIDAPKVEFLDVGCGFGGLTIALATLFPENLTLAMEIRPKVTEYVRLRIDALRQDALATTKAYQNVSVLRTNAMRYLPHYFEKGQIKKMFFCFPDPQFKVRNHRRRIVNTHLLTEYAYLIAEGGILYTITDVEDLHNWHVAKCDAHPCFERITDEADLEADPCVKAMTEETEEGKKVARSGGKKYVAVYRRIPDATV 250
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|698799706|ref|XP_009832882.1| (tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces astaci] >gi|574112279|gb|ETV77772.1| tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces astaci]) HSP 1 Score: 318.546 bits (815), Expect = 3.521e-106 Identity = 148/233 (63.52%), Postives = 181/233 (77.68%), Query Frame = 0
Query: 42 PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKE--ASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEE-TLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
PQK+FYRSRAHCNPLSHND+ +YP +P MNWS +P L +P V LD+GCGFGGLT+AL+ LFPDK LA+EIR KV E+VRLRIE +R+E ++ + +N +VL+TNAM+YLPH+F KGQ+QK+FFCFPDP FK +NHRRRIV+ LL EYAYL+ EGGILY ITDVE+LH WHVAK H FER+ +E L+ D V A+T ETEE KKV R+GG KY V+RR DA V
Sbjct: 25 PQKKFYRSRAHCNPLSHNDSFDYPLNPADMNWSTHFPKLENPKVDILDIGCGFGGLTIALAGLFPDKTTLAMEIRPKVTEYVRLRIEALRQENASTNQFQNVSVLRTNAMRYLPHYFEKGQIQKMFFCFPDPQFKQRNHRRRIVNTHLLAEYAYLIPEGGILYTITDVEDLHNWHVAKCDAHPCFERITDEAVLSADPCVAAMTNETEEGKKVARSGGNKYIAVYRRVSDAHV 257
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|675163837|ref|XP_008890803.1| (tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica INRA-310] >gi|566033384|gb|ETI56295.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P1569] >gi|567971071|gb|ETK96085.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >gi|567999419|gb|ETL49458.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >gi|568028576|gb|ETM02515.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >gi|568059182|gb|ETM55761.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >gi|568110158|gb|ETN24765.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica INRA-310] >gi|570337091|gb|ETO85039.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P1976] >gi|570961118|gb|ETP26097.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica CJ01A1] >gi|570997775|gb|ETP54088.1| tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 318.161 bits (814), Expect = 3.575e-106 Identity = 153/239 (64.02%), Postives = 177/239 (74.06%), Query Frame = 0
Query: 37 EDGQH----PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
ED Q PQK+FYRSRAHCNPLSHND YP P +M+WS YPG+ +P V FLDVGCGFGGLTV L+ LFPDK+ LALEIRAKV E+VRLRIE +R E + +N + L+TNAM+YLPH+FRKGQ+ K+FFCFPDP FK + HRRRIV LL EYAYLL GGILY ITDVEELHQWHV K S H F R+P+ L D V A+T ETEE KKV R GG+KY VFRR+ + V
Sbjct: 8 EDAQTLSKLPQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRSENPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHQWHVEKCSSHPCFTRIPDSELESDPCVKAMTEETEEGKKVARGGGKKYVAVFRRKANEDV 246
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|673040883|ref|XP_008874402.1| (tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces invadans] >gi|574470144|gb|ETV97156.1| tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces invadans]) HSP 1 Score: 318.161 bits (814), Expect = 5.694e-106 Identity = 149/237 (62.87%), Postives = 183/237 (77.22%), Query Frame = 0
Query: 42 PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKE--ASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEE-TLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINAS 275
PQK+FYRSRAHCNPLSHND EYP +P +M+WS YP L +P V FLD+GCGFGGLT+AL+ LFP+K LA+EIR KV E+VRLRIE +R+E +S + +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRIV+ LLTEYAY + EGGILY ITDVE+LH WHVAK H FER+ ++ L D V A+T ETEE KKV R+GG KY V+RR DAV A+
Sbjct: 25 PQKKFYRSRAHCNPLSHNDLFEYPLNPTEMDWSAHYPKLDNPKVNFLDIGCGFGGLTIALANLFPNKTTLAMEIRPKVTEYVRLRIEALRQEHASSNQFQNVSVLRTNAMRYLPHYFEKGQIEKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYFIPEGGILYTITDVEDLHNWHVAKCDSHPCFERITDDAVLKADPCVQAMTEETEEGKKVARSGGNKYVAVYRRVSDAVATAAA 261
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|953486080|emb|CEG50258.1| (trna (guanine-n-)-methyltransferase [Plasmopara halstedii]) HSP 1 Score: 316.62 bits (810), Expect = 1.515e-105 Identity = 150/230 (65.22%), Postives = 174/230 (75.65%), Query Frame = 0
Query: 42 PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
PQK+FYRSRAHCNPLSHND +YP P KM+WS YP + +P V FLDVGCGFGGLTV L+ LFPDK+ LALEIRAKV E+VRLRIE +R E R +N + L+TNAM+YLPH+FRKGQ+ K+FFCFPDP FK + HRRRIV LL EYAYLL GGILY ITDVEELH+WHV K S H F R+ + L D V A+T ETEE KKV R GG+KY VFRR+P+ V
Sbjct: 18 PQKKFYRSRAHCNPLSHNDCFDYPLTPDKMDWSAHYPNIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRNENPGRYQNVSTLRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLASGGILYTITDVEELHKWHVEKCSSHPCFIRMDDSELLSDPCVKAMTEETEEGKKVARGGGKKYLAVFRRKPNEEV 247
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|1214667147|gb|OWY93711.1| (TRNA (guanine-N(7)-)-methyltransferase, partial [Phytophthora megakarya]) HSP 1 Score: 315.849 bits (808), Expect = 3.082e-105 Identity = 147/230 (63.91%), Postives = 174/230 (75.65%), Query Frame = 0
Query: 42 PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
PQK+FYRSRAHCNPLSHND YP P +M+WS YPG+ +P V FLDVGCGFGGLTV L+ LFPDK+ LA+EIRAKV E+VRLRIE +R E + +N + L+TNAM+YLPH+FRKGQ+ K+FFCFPDP FK + HRRRIV LL EYAYLL GGILY ITDVEELH+WHV K S H F R+P+ L D + A+T ETEE KKV R GG+KY VFRR+ + V
Sbjct: 18 PQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLAMEIRAKVTEYVRLRIEALRNEKPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHEWHVEKCSSHPCFTRIPDSELDSDPCIKAMTEETEEGKKVARGGGKKYVAVFRRKTNEDV 247
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|813198476|ref|XP_012208821.1| (hypothetical protein SPRG_14014 [Saprolegnia parasitica CBS 223.65] >gi|641526101|gb|KDO20496.1| hypothetical protein SPRG_14014 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 313.923 bits (803), Expect = 2.353e-104 Identity = 149/244 (61.07%), Postives = 185/244 (75.82%), Query Frame = 0
Query: 36 VEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEA---SPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEE-TLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINAS 275
V+ PQK+FYRSRAHCNPLSHND+ +YP P +M+WS YP + P V FLDVGCGFGGLT+AL+ LFP + LA+EIR KV E+VRLRIE +R++A + +N +VL+TNAM+YLPH+F KGQ+QK+FFCFPDP FK +NHRRRIV+ LLTEYAYL+ EGGILY ITDVE+LH WHVAK H FER+ ++ L D V A+T ETEE KKV R+GG+KY V+RRR +A V A+
Sbjct: 16 VDIAGMPQKKFYRSRAHCNPLSHNDSFDYPLRPVEMDWSSHYPNVEAPKVEFLDVGCGFGGLTIALATLFPTNLTLAMEIRPKVTEYVRLRIEALRQDALATTKAYQNVSVLRTNAMRYLPHYFAKGQIQKMFFCFPDPQFKLRNHRRRIVNTHLLTEYAYLIAEGGILYTITDVEDLHNWHVAKCDAHPCFERIIDDAVLEADPCVKAMTEETEEGKKVARSGGKKYIAVYRRRTNADVAAAA 259
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|970663469|gb|KUG00634.1| (tRNA (guanine-N(7)-)-methyltransferase [Phytophthora nicotianae]) HSP 1 Score: 311.612 bits (797), Expect = 1.870e-103 Identity = 153/246 (62.20%), Postives = 177/246 (71.95%), Query Frame = 0
Query: 37 EDGQH----PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPV-------VRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
ED Q PQK+FYRSRAHCNPLSHND YP P +M+WS YPG+ +P V FLDVGCGFGGLTV L+ LFPDK+ LALEIRAKV E+VRLRIE +R E + +N + L+TNAM+YLPH+FRKGQ+ K+FFCFPDP FK + HRRRIV LL EYAYLL GGILY ITDVEELHQWHV K S H F R+P+ L D V A+T ETEE KKV R GG+KY VFRR+ + V
Sbjct: 8 EDAQTLSKLPQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPYESTLIRSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRSENPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHQWHVEKCSSHPCFTRIPDSELESDPCVKAMTEETEEGKKVARGGGKKYVAVFRRKANEDV 253
BLAST of EWM28158.1 vs. NCBI_GenBank
Match: gi|1173960889|gb|OQS06972.1| (tRNA (guanine-N(7)-)-methyltransferase [Thraustotheca clavata]) HSP 1 Score: 311.227 bits (796), Expect = 1.972e-103 Identity = 145/234 (61.97%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 42 PQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRK---EASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEET-LAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVV 271
PQK+FYRSRAHCNPLSHND+ YP P M+WS YP + +P V FLDVGCGFGGLT+AL+ LFP+ + LA+EIR KV E+VRLRIE +RK E + +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRIV+ LLTEYAYL+ EGGILY ITDVE+LH WHVAK H FER+ + L D V A+T ETEE KKV R+GG+KY V+RR +A +
Sbjct: 19 PQKKFYRSRAHCNPLSHNDSFVYPLRPNAMDWSTHYPNIENPKVEFLDVGCGFGGLTIALATLFPENLTLAMEIRPKVTEYVRLRIEALRKDSLETTKAYQNVSVLRTNAMRYLPHYFEKGQIKKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYLIAEGGILYTITDVEDLHNWHVAKCDAHPCFERITDAAELEADPCVKAMTEETEEGKKVARSGGKKYIAVYRRLKNATI 252 The following BLAST results are available for this feature:
BLAST of EWM28158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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