EWM28247.1, cds2506 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|585110592|gb|EWM28247.1| (hypothetical protein Naga_100004g157 [Nannochloropsis gaditana]) HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0
Query: 1 MSDASKEVLAPPSGSGGPVMRDEGTCGKGKEEKENAESRETSEVKKTEEEGEEEDIDDDALEDEGSAGGDVSGGKDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYYNYGPNAFDSVPFKNIEPWTKESKEAFAKASKRFKDKIPEAINLAEEDAARPMAERSPGPLDLKSVRERAREEVKQSGQGGQNALRKGTSNKQQSFLTSEKSRINETHEALKGKKKKRLHADDEISGARPSGGAAQGVKKWKKDFERESEKDRFNRLSRNLQIMLEDEILNVPKICSTLEKLSAMTVTIEQLTESGVGQVVKGLRKHAQSEIQVQAKAAFSRWKENFKQEIKMAPEPAVPGDVNLERKRQEAHDPKEDKIESQKPDAQSYTPTASTNAETTSSGTSSGLEG 451
MSDASKEVLAPPSGSGGPVMRDEGTCGKGKEEKENAESRETSEVKKTEEEGEEEDIDDDALEDEGSAGGDVSGGKDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYYNYGPNAFDSVPFKNIEPWTKESKEAFAKASKRFKDKIPEAINLAEEDAARPMAERSPGPLDLKSVRERAREEVKQSGQGGQNALRKGTSNKQQSFLTSEKSRINETHEALKGKKKKRLHADDEISGARPSGGAAQGVKKWKKDFERESEKDRFNRLSRNLQIMLEDEILNVPKICSTLEKLSAMTVTIEQLTESGVGQVVKGLRKHAQSEIQVQAKAAFSRWKENFKQEIKMAPEPAVPGDVNLERKRQEAHDPKEDKIESQKPDAQSYTPTASTNAETTSSGTSSGLEG
Sbjct: 1 MSDASKEVLAPPSGSGGPVMRDEGTCGKGKEEKENAESRETSEVKKTEEEGEEEDIDDDALEDEGSAGGDVSGGKDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYYNYGPNAFDSVPFKNIEPWTKESKEAFAKASKRFKDKIPEAINLAEEDAARPMAERSPGPLDLKSVRERAREEVKQSGQGGQNALRKGTSNKQQSFLTSEKSRINETHEALKGKKKKRLHADDEISGARPSGGAAQGVKKWKKDFERESEKDRFNRLSRNLQIMLEDEILNVPKICSTLEKLSAMTVTIEQLTESGVGQVVKGLRKHAQSEIQVQAKAAFSRWKENFKQEIKMAPEPAVPGDVNLERKRQEAHDPKEDKIESQKPDAQSYTPTASTNAETTSSGTSSGLEG 451
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|301121572|ref|XP_002908513.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103544|gb|EEY61596.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 66.2402 bits (160), Expect = 6.044e-8 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0
Query: 99 VVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYYNYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPGPL 221
V + +D K R Q+VWAK AG+ WP I P + L+ + + + T +++F+ Y N + S+ FK IEPW TK + +E + +KA KR + + AI +A+++ P+ ER+ G L
Sbjct: 130 VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKNLE------TKYLVFF--YVSNNYASISFKMIEPWDDTKNKYREGYPEKDSKAPKR-RVSLMMAIEVADKETTLPIEERADGLL 250
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|635370581|emb|CCI41327.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 66.2402 bits (160), Expect = 7.286e-8 Identity = 48/172 (27.91%), Postives = 81/172 (47.09%), Query Frame = 0
Query: 99 VVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW---TKESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPGPLDLK------SVRERAREEVKQSGQGGQNALRKGTSNKQQ 254
V+ +P++ K Q+VWAK G+ +WP + P + ++ S + + + +F+Y N+GP VPFK++E W ++ +E F AKA KR K+ + AI A+ D RP ER+ L++ SVR ++ +G + T + QQ
Sbjct: 136 VLALPQEIKDMFGQLVWAKMQGYPYWPALVVDPRHLPSSQQKQAIRSFET-----SKYWVFFYRARNFGP-----VPFKSVEKWLDTNQKYREGFPVGAAKAPKRRKE-LMGAIEDADVDYKRPAIERASDFLEVSISYVAMSVRHLFMRSLQHTGTATNRTAKANTISAQQ 296
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|1214702260|gb|OWZ14484.1| (hypothetical protein PHMEG_00012040 [Phytophthora megakarya]) HSP 1 Score: 65.4698 bits (158), Expect = 1.027e-7 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 0
Query: 89 EKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYYNYGPNAFDSVPFKNIEPWTKES-------KEAFAKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVR 227
++E L A V + ++ K R Q+VWAK G+ +WP I P + L+ + KA E T +++F+Y N F ++ FK IEPW E +KA KR + K+ AI +A+ + P+ ER+ G PL+L V+
Sbjct: 130 QEEQKLVEAKVNALSDEIKGRFGQIVWAKMGGYPYWPCIITDPRLLPQKLQETAM---KALE---TKYLVFFYVS--NNFATISFKMIEPWDDTKFKYREGHPEKDSKAPKR-RVKLMSAIEVADRETKLPIQERADGLLKPLELVVVK 269
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|570965399|gb|ETP28518.1| (hypothetical protein F442_22188 [Phytophthora parasitica P10297]) HSP 1 Score: 65.4698 bits (158), Expect = 1.170e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|675213397|ref|XP_008915583.1| (hypothetical protein PPTG_19076 [Phytophthora parasitica INRA-310] >gi|568084163|gb|ETM99103.1| hypothetical protein PPTG_19076 [Phytophthora parasitica INRA-310]) HSP 1 Score: 65.4698 bits (158), Expect = 1.233e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|567973762|gb|ETL24417.1| (hypothetical protein L916_21569 [Phytophthora parasitica] >gi|570935109|gb|ETP00366.1| hypothetical protein F441_22213 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.4698 bits (158), Expect = 1.277e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|567945160|gb|ETK70971.1| (hypothetical protein L915_21700 [Phytophthora parasitica] >gi|568003287|gb|ETL77637.1| hypothetical protein L917_21421 [Phytophthora parasitica] >gi|570311379|gb|ETO59327.1| hypothetical protein F444_22301 [Phytophthora parasitica P1976]) HSP 1 Score: 65.4698 bits (158), Expect = 1.288e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|566007659|gb|ETI30570.1| (hypothetical protein F443_22307 [Phytophthora parasitica P1569] >gi|568033170|gb|ETM30892.1| hypothetical protein L914_21433 [Phytophthora parasitica]) HSP 1 Score: 65.0846 bits (157), Expect = 1.358e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261
BLAST of EWM28247.1 vs. NCBI_GenBank
Match: gi|970643980|gb|KUF85018.1| (Twinfilin [Phytophthora nicotianae]) HSP 1 Score: 65.0846 bits (157), Expect = 1.546e-7 Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 75 KDVEVEGEDDIDSEEKEAALRAALVVGMPEDQKARLKQVVWAKSAGFSHWPGFIYHPADVRDDLRRSCYSSAKAKEGPRTHHIIFYY---NYGPNAFDSVPFKNIEPW--TK-ESKEAF----AKASKRFKDKIPEAINLAEEDAARPMAERSPG---PLDLKSVRERA 230
K +E EDD E++E + V + +D K R Q+VWAK AG+ WP I P + L+ + + T ++F+Y NY P + FK IE W TK + +E + +KA KR + K+ AI +A+++ P+ +R+ G P+++ +V++ A
Sbjct: 108 KKAAIETEDDAVEEQREVEKK---VAALSDDVKGRFGQIVWAKMAGYPFWPCIITDPRLLPKKLQETAMKHLE------TKFLVFFYVSNNYAP-----ISFKMIESWDDTKNKYREGYPEKDSKAPKR-RAKLMLAIEVADKETKLPIEDRADGLLKPVEMVAVQQPA 261 The following BLAST results are available for this feature:
BLAST of EWM28247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|