EWM28257.1, cds2503 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|585110602|gb|EWM28257.1| (ap-4 complex subunit mu [Nannochloropsis gaditana]) HSP 1 Score: 1004.97 bits (2597), Expect = 0.000e+0 Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRVGTGSER 490
MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRVGTGSER
Sbjct: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRVGTGSER 490
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|299115981|emb|CBN75982.1| (Coatomer protein complex, gamma sub-unit [Ectocarpus siliculosus]) HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0 Identity = 290/483 (60.04%), Postives = 370/483 (76.60%), Query Frame = 0
Query: 5 MSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPK-INSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGG--YGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRV 484
+S FFILSPRGDTIIS+D+RGD++ + FRKVKFW+ GD PP F +DG+N++YVRKNGLLF +T++NVSPS +ELLNR+AKVFKDYCGVLSEE+IRKNFILVYELLDE +D+GY Q TSTE+L+NHV NEPI+V+S KS +R+P + +KT PS+++ KP++ S Q G Q+NEIFVDILERL+VLFS SG ++NS+IDGCIQMKSYLSGNPEL+LALN DLV+GK G +G+VVLDDCNFHEC +LDEFES R LSF PPDGEF+LLNYR+ EFR PFR+FP++ ++ PY++E+ +++RAD+PE+ G NV VR+PMPR+A++V++E+ GQT+EY+A+E RVVW IKKF G++E TL K+TL ++VN+A+ RKE+GPVSM FEIPMYNVSNLQVRYL+I+E KSYNP+RWVRYVTQ+SS+VCRV
Sbjct: 6 VSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKVKFWESGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKS-MRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRMNAEFRCPFRLFPSIGDIDPYRMEVVVIVRADMPETAAGTNVVVRLPMPRNAVSVSSEVES-----------RVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLP--------------NVVNAAN--------------------RKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 442
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|676383657|ref|XP_009035107.1| (hypothetical protein AURANDRAFT_36844 [Aureococcus anophagefferens] >gi|323454428|gb|EGB10298.1| hypothetical protein AURANDRAFT_36844 [Aureococcus anophagefferens]) HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0 Identity = 289/489 (59.10%), Postives = 361/489 (73.82%), Query Frame = 0
Query: 5 MSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFW--DKGD---APPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSKTTPSTAVHKPIT--ISAQSGGKQ--KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRV 484
+S FF+LSPRGDTIIS+DFRGDS AAE FRKVKFW DKG APPVF + + +V+V+K+GL+F +RFN SPS T+ELLNR+ KVFKDYCGVLSEE+IRKNFIL+YELLDE++DFGY Q TSTE+LK VYNEP++V++ K+ R+P +++KTTPST+VHKPI S+ GG + KNEIFVDILERL +LFS SG ++NSTIDGCIQMKSYLSGNPEL+LALN DLV+GKGG YGAVVLDDCNFHECVRLD+FESSR LSF PP+GEF++LNYR TG+FRAPFR+ P ++E SP+ +++ +++RA+IPE+NYG NV + VP PR+ G G SG G ++Y+A+ +++V+ +KKF G E KITL SA TA ARKE+GPVS++FEIPMYNVSNLQV+YLRI+EQ K+YNPYRWVRYVT++SS+VCR
Sbjct: 2 LSQFFVLSPRGDTIISKDFRGDSPQGAAEAFFRKVKFWSNDKGASGAAPPVFRVGDVTYVWVKKSGLMFACNSRFNCSPSMTLELLNRVVKVFKDYCGVLSEEAIRKNFILIYELLDEVIDFGYPQGTSTENLKAFVYNEPVLVDAQKT--RVPSLSAKTTPSTSVHKPIAGGKSSVMGGARSDKNEIFVDILERLTMLFSPSGAVVNSTIDGCIQMKSYLSGNPELRLALNEDLVVGKGGA-YGAVVLDDCNFHECVRLDDFESSRLLSFLPPEGEFVVLNYRCTGDFRAPFRVLPQIEESSPFTIDVVVLVRAEIPETNYGGNVVITVPCPRTTA--------GASCGPPSG--GAIGHGADYDAANRKLVFTVKKFQGGVEHAFRAKITL--------------------------SAVCTA--------QARKEVGPVSLTFEIPMYNVSNLQVKYLRIAEQSKAYNPYRWVRYVTRSSSYVCRC 443
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|1173937532|gb|OQR88307.1| (AP-4 complex subunit mu-1 [Achlya hypogyna]) HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0 Identity = 271/488 (55.53%), Postives = 343/488 (70.29%), Query Frame = 0
Query: 4 AMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVV-----ESAKSNLRMPKINSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
++S F+ILS RGDT++S DFRGD ++AEI FRK KFWDKGDAPP FH+DG+N++YV+KNGL F ATTRFNVSP+ +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+GYAQ TSTE LK HV+NE I+V AK++ + S + AV KP+ + K +NE+F DILERLNV+FS G ++N++++G IQMKSYL+GNPEL+LALN DLVIG+ YG VVLDDCNFHECV+LDEFE R L F PPDGEF ++NYRITGEFRAPFRIFP V+E SP K+EM L +RAD+P++NYGANV +R P+P++ ++V+ +I + T+GQ +EY +E +V W IK+F GATE TL KITL+ P Q + R+EIGPVSM+FEIPMYNVS LQVRYLRI E + +Y RWVRYVTQ+SS+V R+
Sbjct: 2 SISQFYILSSRGDTVLSSDFRGDVASDSAEIFFRKAKFWDKGDAPPAFHVDGVNYLYVKKNGLYFVATTRFNVSPAYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGYAQDTSTEGLKVHVHNEAILVGDAALAKAKASTGILGRQSNIKAANAVRKPVATGQSANKKDENELFCDILERLNVVFSAGGQMLNASVEGRIQMKSYLAGNPELRLALNEDLVIGQKSSSYGQVVLDDCNFHECVQLDEFERDRVLVFTPPDGEFTVINYRITGEFRAPFRIFPFVEEQSPTKIEMILKVRADMPDNNYGANVIIRFPVPQNTVSVSCDIGKN-----------TAGQLAEYRENENQVRWAIKRFAGATEMTLRAKITLSA--------------------------------PSQHV---RREIGPVSMNFEIPMYNVSTLQVRYLRIPEHARHPNYKYKRWVRYVTQSSSYVSRI 443
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|695408167|ref|XP_009524568.1| (hypothetical protein PHYSODRAFT_557715 [Phytophthora sojae] >gi|348682035|gb|EGZ21851.1| hypothetical protein PHYSODRAFT_557715 [Phytophthora sojae]) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 280/495 (56.57%), Postives = 349/495 (70.51%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSK-------TTPSTAVHKPITISAQSGGKQ-KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG-GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
MS ++S F+ILS RGDTII DFRGD N+AEI FRKVKFW+KGDAPP F++DG+N+++V+KNGL F ATTR+NVSPS +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+G+AQ TSTE LK HV+NE I+V A L PK +SK ++AV KP+ + QS KQ +NE+F DILERLNV+FS G ++N++I+G IQ+KSYLSGNPEL+LALN DLVIG G YG VVLDDCNFH+CV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP V+E+SP K+EM L IRAD+PE+NYGANV +R P+P+S +AV+ +I + + +GQ +EY +E +V W IK+F G TE TL KITL GQ R+EIGPVSM+FEIPMYN S+LQVRYLRI E + +Y RWVRYVTQ+SS+VCR+
Sbjct: 1 MSSSISQFYILSTRGDTIIFNDFRGDVESNSAEIFFRKVKFWEKGDAPPTFNVDGVNYLFVKKNGLYFVATTRYNVSPSYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGFAQDTSTEGLKVHVHNEAILVGDAV--LSKPKASSKFMNRSSNIKAASAVKKPVATAGQSSKKQDENELFCDILERLNVVFSSGGQMLNASIEGRIQLKSYLSGNPELRLALNEDLVIGNTGARQYGQVVLDDCNFHDCVQLDEFERDRVLIFQPPDGEFTVINYRITGDFRAPFRIFPFVEELSPTKIEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIGK-----------SAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-----------------------------------GQPSPHVRREIGPVSMNFEIPMYNTSSLQVRYLRIPEHARHPNYTYKRWVRYVTQSSSYVCRI 447
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|1173936271|gb|OQR87251.1| (AP-4 complex subunit mu-1 [Thraustotheca clavata]) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 269/488 (55.12%), Postives = 344/488 (70.49%), Query Frame = 0
Query: 4 AMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVV-----ESAKSNLRMPKINSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGGGYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
++S F+ILS RGDT+++ DFRGD ++AEI FRK KFWDKGDAPP FH+DG+N++YV+KNGL F ATTRFNVSP+ +ELL R+ +VFKDYCGVLSEE+++KNFIL YELLDE MD+GYAQ TSTE LK HV+NE I+V AK++ + + P+ AV KP+ S K +NE+F DILERLNV+FS SG ++N++++G IQMKSYL+GNPEL+LALN DLVIG+ YG VVLDDCNFHECV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP ++E SP K+EM L IRAD+P++NYGANV +R P+P++ ++V+ +I + T+GQ +EY +E +V W IK+FPGA+E TL KITL+ + R+EIGPVSM+FEIPMYNVS LQVRYLRI E + +Y RWVRYVTQ+SS+V R+
Sbjct: 2 SISQFYILSSRGDTVLANDFRGDVASDSAEIFFRKAKFWDKGDAPPAFHVDGVNYLYVKKNGLYFVATTRFNVSPAYILELLTRLCRVFKDYCGVLSEETLQKNFILCYELLDETMDYGYAQDTSTEGLKVHVHNEAILVGEAAVAKAKASGGILGRQTNIKPANAVRKPVATGQSSNKKDENELFCDILERLNVVFSPSGQMLNASVEGRIQMKSYLAGNPELRLALNEDLVIGQKSSSYGQVVLDDCNFHECVQLDEFERDRVLVFTPPDGEFTVINYRITGDFRAPFRIFPFLEEQSPTKLEMILKIRADMPDNNYGANVIIRFPVPQNTVSVSCDIGKN-----------TAGQLAEYRENENQVRWAIKRFPGASEFTLRAKITLSAPSL-----------------------------------HVRREIGPVSMNFEIPMYNVSTLQVRYLRIPEHARHPNYKYKRWVRYVTQSSSYVSRI 443
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|568033350|gb|ETM31061.1| (hypothetical protein L914_21285 [Phytophthora parasitica]) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 280/495 (56.57%), Postives = 348/495 (70.30%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSK-------TTPSTAVHKPITISAQSGGKQ-KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG-GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
MS ++S F+ILS RGDTII DFRGD N+AEI FRKVKFW+KGDAPP F++DG+N+++V+KNGL F ATTR+NVSPS +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+G+AQ TSTE LK HV+NE I+V A L PK SK ++AV KP+ + QS KQ +NE+F DILERLNV+FS G ++N++I+G IQ+KSYLSGNPEL+LALN DLVIG G YG VVLDDCNFH+CV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP V+E+SP K+EM L IRAD+PE+NYGANV +R P+P+S +AV+ +I + + +GQ +EY +E +V W IK+F G TE TL KITL GQ R+EIGPVSM+FEIPMYN S+LQVRYLRI E + +Y RWVRYVTQ+SS+VCR+
Sbjct: 45 MSSSISQFYILSTRGDTIIFSDFRGDVESNSAEIFFRKVKFWEKGDAPPTFNVDGVNYLFVKKNGLYFVATTRYNVSPSYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGFAQDTSTEGLKVHVHNEAILVGDAV--LSKPKAGSKFMNRSSNIKAASAVKKPVATAGQSSKKQDENELFCDILERLNVVFSSGGQMLNASIEGRIQLKSYLSGNPELRLALNEDLVIGNTGARQYGQVVLDDCNFHDCVQLDEFERDRVLIFQPPDGEFTVINYRITGDFRAPFRIFPFVEELSPTKIEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIGK-----------SAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-----------------------------------GQPSPHVRREIGPVSMNFEIPMYNTSSLQVRYLRIPEHARHPNYTYKRWVRYVTQSSSYVCRI 491
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|567973925|gb|ETL24575.1| (hypothetical protein L916_21430 [Phytophthora parasitica] >gi|570935262|gb|ETP00519.1| hypothetical protein F441_22068 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 280/495 (56.57%), Postives = 348/495 (70.30%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSK-------TTPSTAVHKPITISAQSGGKQ-KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG-GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
MS ++S F+ILS RGDTII DFRGD N+AEI FRKVKFW+KGDAPP F++DG+N+++V+KNGL F ATTR+NVSPS +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+G+AQ TSTE LK HV+NE I+V A L PK SK ++AV KP+ + QS KQ +NE+F DILERLNV+FS G ++N++I+G IQ+KSYLSGNPEL+LALN DLVIG G YG VVLDDCNFH+CV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP V+E+SP K+EM L IRAD+PE+NYGANV +R P+P+S +AV+ +I + + +GQ +EY +E +V W IK+F G TE TL KITL GQ R+EIGPVSM+FEIPMYN S+LQVRYLRI E + +Y RWVRYVTQ+SS+VCR+
Sbjct: 45 MSSSISQFYILSTRGDTIIFSDFRGDVESNSAEIFFRKVKFWEKGDAPPTFNVDGVNYLFVKKNGLYFVATTRYNVSPSYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGFAQDTSTEGLKVHVHNEAILVGDAV--LSKPKAGSKFMNRSSNIKAASAVKKPVATAGQSSKKQDENELFCDILERLNVVFSSGGQMLNASIEGRIQLKSYLSGNPELRLALNEDLVIGNTGARQYGQVVLDDCNFHDCVQLDEFERDRVLIFQPPDGEFTVINYRITGDFRAPFRIFPFVEELSPTKIEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIGK-----------SAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-----------------------------------GQPSPHVRREIGPVSMNFEIPMYNTSSLQVRYLRIPEHARHPNYTYKRWVRYVTQSSSYVCRI 491
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|675213051|ref|XP_008915410.1| (hypothetical protein PPTG_18768 [Phytophthora parasitica INRA-310] >gi|566007817|gb|ETI30728.1| hypothetical protein F443_22165 [Phytophthora parasitica P1569] >gi|568003448|gb|ETL77796.1| hypothetical protein L917_21283 [Phytophthora parasitica] >gi|568084335|gb|ETM99268.1| hypothetical protein PPTG_18768 [Phytophthora parasitica INRA-310] >gi|570311536|gb|ETO59484.1| hypothetical protein F444_22157 [Phytophthora parasitica P1976] >gi|570965555|gb|ETP28674.1| hypothetical protein F442_22039 [Phytophthora parasitica P10297]) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 280/495 (56.57%), Postives = 348/495 (70.30%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSK-------TTPSTAVHKPITISAQSGGKQ-KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG-GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
MS ++S F+ILS RGDTII DFRGD N+AEI FRKVKFW+KGDAPP F++DG+N+++V+KNGL F ATTR+NVSPS +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+G+AQ TSTE LK HV+NE I+V A L PK SK ++AV KP+ + QS KQ +NE+F DILERLNV+FS G ++N++I+G IQ+KSYLSGNPEL+LALN DLVIG G YG VVLDDCNFH+CV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP V+E+SP K+EM L IRAD+PE+NYGANV +R P+P+S +AV+ +I + + +GQ +EY +E +V W IK+F G TE TL KITL GQ R+EIGPVSM+FEIPMYN S+LQVRYLRI E + +Y RWVRYVTQ+SS+VCR+
Sbjct: 45 MSSSISQFYILSTRGDTIIFSDFRGDVESNSAEIFFRKVKFWEKGDAPPTFNVDGVNYLFVKKNGLYFVATTRYNVSPSYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGFAQDTSTEGLKVHVHNEAILVGDAV--LSKPKAGSKFMNRSSNIKAASAVKKPVATAGQSSKKQDENELFCDILERLNVVFSSGGQMLNASIEGRIQLKSYLSGNPELRLALNEDLVIGNTGARQYGQVVLDDCNFHDCVQLDEFERDRVLIFQPPDGEFTVINYRITGDFRAPFRIFPFVEELSPTKIEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIGK-----------SAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-----------------------------------GQPSPHVRREIGPVSMNFEIPMYNTSSLQVRYLRIPEHARHPNYTYKRWVRYVTQSSSYVCRI 491
BLAST of EWM28257.1 vs. NCBI_GenBank
Match: gi|970617320|gb|KUF65421.1| (AP-4 complex subunit mu-1 [Phytophthora nicotianae]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 280/495 (56.57%), Postives = 348/495 (70.30%), Query Frame = 0
Query: 1 MSGAMSSFFILSPRGDTIISRDFRGDSLPNAAEILFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPKINSK-------TTPSTAVHKPITISAQSGGKQ-KNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG-GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIAVTTEIARGGGAGLASGALATSGQTSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVGGSSTSSSGGSLVNSASTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQK--SYNPYRWVRYVTQASSFVCRV 484
MS ++S F+ILS RGDTII DFRGD N+AEI FRKVKFW+KGDAPP F++DG+N+++V+KNGL F ATTR+NVSPS +ELL R+ +VFKDYCGVLSEE++RKNFIL YELLDE +D+G+AQ TSTE LK HV+NE I+V A L PK SK ++AV KP+ + QS KQ +NE+F DILERLNV+FS G ++N++I+G IQ+KSYLSGNPEL+LALN DLVIG G YG VVLDDCNFH+CV+LDEFE R L F PPDGEF ++NYRITG+FRAPFRIFP V+E+SP K+EM L IRAD+PE+NYGANV +R P+P+S +AV+ +I + + +GQ +EY +E +V W IK+F G TE TL KITL GQ R+EIGPVSM+FEIPMYN S+LQVRYLRI E + +Y RWVRYVTQ+SS+VCR+
Sbjct: 1 MSSSISQFYILSTRGDTIIFSDFRGDVESNSAEIFFRKVKFWEKGDAPPTFNVDGVNYLFVKKNGLYFVATTRYNVSPSYILELLTRLCRVFKDYCGVLSEETLRKNFILCYELLDETLDYGFAQDTSTEGLKVHVHNEAILVGDAV--LSKPKAGSKFMNRSSNIKAASAVKKPVATAGQSSKKQDENELFCDILERLNVVFSSGGQMLNASIEGRIQLKSYLSGNPELRLALNEDLVIGNTGARQYGQVVLDDCNFHDCVQLDEFERDRVLIFQPPDGEFTVINYRITGDFRAPFRIFPFVEELSPTKIEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIGK-----------SAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-----------------------------------GQPSPHVRREIGPVSMNFEIPMYNTSSLQVRYLRIPEHARHPNYTYKRWVRYVTQSSSYVCRI 447 The following BLAST results are available for this feature:
BLAST of EWM28257.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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