EWM28289.1, cds2472 (CDS) Nannochloropsis gaditana

Overview
NameEWM28289.1
Unique Namecds2472
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:493568..493885 +
Alignment locationCM002459.1:493958..494062 +
Alignment locationCM002459.1:494229..494387 +
Alignment locationCM002459.1:494466..494700 +
Alignment locationCM002459.1:494886..495096 +
Alignment locationCM002459.1:495208..495307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28289.1
Productarp1 actin-related protein 1 centractin beta
Orig transcript idgnl|cribi|Naga_100004g122.9220.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:493568..493885 +
CM002459.1supercontigCM002459.1:493958..494062 +
CM002459.1supercontigCM002459.1:494229..494387 +
CM002459.1supercontigCM002459.1:494466..494700 +
CM002459.1supercontigCM002459.1:494886..495096 +
CM002459.1supercontigCM002459.1:495208..495307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005856cytoskeleton
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR020902Actin/actin-like_CS
IPR004000Actin
Homology
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|585110634|gb|EWM28289.1| (arp1 actin-related protein 1 centractin beta [Nannochloropsis gaditana])

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query:    1 MEGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            MEGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL
Sbjct:    1 MEGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|953486866|emb|CEG48928.1| (alpha-centractin [Plasmopara halstedii])

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 249/396 (62.88%), Postives = 316/396 (79.80%), Query Frame = 0
Query:    3 GISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEE---------------APPQPDT--------FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
             + NQP+VIDNG+G +KAGFAGG+ P+VVF S VG  KH R+MPGGA EG D+ VG ++Q+HRG F+  Y MEHGV+ DW  M ++W H+YS+D LNV SEDHPVLLTEAPLNP+ NR++A EV FE+FNVP++F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAI+R D+AGRDVT HLQLLLRR+GY   TSAE+++VR+IKE+ CY++F+P KEE+               A  +P T        + LPDGT + +G ERFRAPE+LF+PE+IGSE +GVHEC++Q+IMK+DLDLR   F QI+L+GGST+FPG+GDRLL E RK AP+D+KIRISAPP R +STWIGGSILASL+TFK++WIT+ +Y+E+G  I+H +TL
Sbjct:    5 ALGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQQHRGLFKIQYAMEHGVITDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFETFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVTHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKLALAVKDMLSAKSEPSTTSGDSTSAYFLPDGTLLNIGPERFRAPEVLFRPEIIGSEARGVHECLVQAIMKSDLDLRTTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRIHSTWIGGSILASLATFKNMWITKTEYEEYGASILHRKTL 400          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|675163267|ref|XP_008890518.1| (hypothetical protein PPTG_00774 [Phytophthora parasitica INRA-310] >gi|566033711|gb|ETI56622.1| hypothetical protein F443_00911 [Phytophthora parasitica P1569] >gi|567971415|gb|ETK96424.1| hypothetical protein L915_00854 [Phytophthora parasitica] >gi|567999754|gb|ETL49789.1| hypothetical protein L916_00843 [Phytophthora parasitica] >gi|568028921|gb|ETM02855.1| hypothetical protein L917_00810 [Phytophthora parasitica] >gi|568059516|gb|ETM56092.1| hypothetical protein L914_00841 [Phytophthora parasitica] >gi|568109847|gb|ETN24454.1| hypothetical protein PPTG_00774 [Phytophthora parasitica INRA-310] >gi|570337481|gb|ETO85429.1| hypothetical protein F444_00918 [Phytophthora parasitica P1976] >gi|570961444|gb|ETP26423.1| hypothetical protein F441_00889 [Phytophthora parasitica CJ01A1] >gi|570998144|gb|ETP54407.1| hypothetical protein F442_00865 [Phytophthora parasitica P10297] >gi|970630950|gb|KUF77737.1| actin [Phytophthora nicotianae] >gi|970638393|gb|KUF81924.1| actin [Phytophthora nicotianae])

HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0
Identity = 249/396 (62.88%), Postives = 315/396 (79.55%), Query Frame = 0
Query:    2 EGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQP--------------------DT--FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            E + NQP+VIDNG+G +KAGFAGG+ P+VVF S VG  KH R+MPGGA EG D+ VG ++Q HRG F+  Y MEHGVV DW  M ++W H+YS+D LNV SEDHPVLLTEAPLNP+ NR++A EV FE+FNVP++F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAI+R D+AGRDVT HLQLLLRR+GY   TSAE+++VR+IKE+ CY++F+P KEE+   +                     DT  + LPDGT + +G E+FRAPE+LF+PE+IGSE +GVHEC++Q+IMK+D+DLRK  F QI+L+GGST+FPG+GDRLL E RK AP+D+KIRISAPP R YSTWIGGSILASL+TFK++WIT+ +Y+E+G  I+H + L
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQHHRGLFKIQYAMEHGVVTDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSALAVKDMISKSKSTTTSGDDTSAYYLPDGTLLNIGPEKFRAPEVLFRPEIIGSEARGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRIYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKNL 403          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|301121026|ref|XP_002908240.1| (actin-like protein [Phytophthora infestans T30-4] >gi|262103271|gb|EEY61323.1| actin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 250/396 (63.13%), Postives = 315/396 (79.55%), Query Frame = 0
Query:    2 EGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQP--------------------DT--FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            E + NQP+VIDNG+G +KAGFAGG+ P+VVF S VG  KH R+MPGGA EG D+ VG ++Q HRG F+  Y MEHGVV DW  M +VW H+YS+D LNV SEDHPVLLTEAPLNP+ NR++A EV FE+FNVP++F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAI+R D+AGRDVT HLQLLLRR+GY   TSAE+++VR+IKE+ CY++F+P KEE+   +                     DT  + LPDGT + +G E+FRAPE+LF+PE+IGSE +GVHEC++Q+IMK+D+DLRK  F QI+L+GGST+FPG+GDRLL E RK AP+D+KIRISAPP R YSTWIGGSILASL+TFK++WIT+ +Y+E+G  I+H + L
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQYHRGLFKIQYAMEHGVVTDWNSMHRVWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFLTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSALAVKDMITKSKSTTTSGDDTSAYYLPDGTLLNIGPEKFRAPEVLFRPEIIGSEARGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRIYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKNL 403          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|299116747|emb|CBN74860.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 246/376 (65.43%), Postives = 315/376 (83.78%), Query Frame = 0
Query:    1 MEGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDT-FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            M  + NQP+VIDNGTG +KAGFAG D+P+VVF+S VGRPKH R M GGAL+G D+ +GKK++EHRG FR ++PMEHGVV +W +ME+VW H+Y RDNLNV  EDH VLLTEAPLNP  NR + +E  FE+F VPA+F APQAILSLYASGRTTGVVLDSGDGV+H VPVYEGFA+ HAI+R DVAGRDVT+ LQLLLRR+G+ LHTSAE ++VRQ+KE+ CY++F+P  EE+   QPDT ++LPDG  I +G ER+RAPE LF PE +GSE  GVH+C+++ IM+ D+D+R+  FGQ+VL+GGST+FPG+GDRLLNE RK AP+++KIRI+APPERK+STW+GGSILASL+TFK +W+T+ +++EHG  I+ +++L
Sbjct:    1 MSAVLNQPVVIDNGTGIIKAGFAGADKPKVVFASHVGRPKHKRAMIGGALDGGDVFLGKKVEEHRGVFRLTHPMEHGVVKNWADMEKVWSHVYGRDNLNVGPEDHAVLLTEAPLNPYKNRRQCAETFFETFGVPAMFCAPQAILSLYASGRTTGVVLDSGDGVTHCVPVYEGFAVRHAITRIDVAGRDVTERLQLLLRRAGHSLHTSAEMEVVRQMKEDLCYVAFNPSTEEQVK-QPDTVYKLPDGQAIRVGPERYRAPECLFHPEQLGSESMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPNIMDSKSL 375          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|695404136|ref|XP_009523456.1| (hypothetical protein PHYSODRAFT_259446 [Phytophthora sojae] >gi|348680923|gb|EGZ20739.1| hypothetical protein PHYSODRAFT_259446 [Phytophthora sojae])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 242/374 (64.71%), Postives = 307/374 (82.09%), Query Frame = 0
Query:    2 EGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            E + NQP+VIDNG+G +KAGFAGG+ P+VVF S VG  KH R+MPGGA EG D+ VG ++Q HRG F+  Y MEHGVV DW  M ++W H+YS+D LNV SEDHPVLLTEAPLNP+ NR++A EV FE+FNVP++F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAI+R D+AGRDVT HLQLLLRR+GY   TSAE+++VR+IKE+ CY++F+P KEE+   +           + +G E+FRAPE+LF+PE+IGSE +GVHEC++Q+IMK+DLDLRK  F Q++L+GGST+FPG+GDRLL E RK AP+D+KIRISAPP R YSTWIGGSILASL+TFK++WIT+ +Y+E+G  I+H + L
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQHHRGLFKIQYAMEHGVVTDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSA--------LAIGPEKFRAPEVLFRPEIIGSEARGVHECLVQAIMKSDLDLRKTLFSQVILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRIYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKNL 373          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|673033540|ref|XP_008870731.1| (hypothetical protein H310_07170 [Aphanomyces invadans] >gi|574473593|gb|ETW00596.1| hypothetical protein H310_07170 [Aphanomyces invadans])

HSP 1 Score: 530.02 bits (1364), Expect = 0.000e+0
Identity = 244/388 (62.89%), Postives = 309/388 (79.64%), Query Frame = 0
Query:    6 NQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEA--------PPQP----------DTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            NQP+V+DNG+G LKAGFAGG+ P+VVF S VG  KH+R+M GGA E  D  VG ++Q+HRG F   Y MEHG+V DW+ M+++W H+YS+D LN+ S++HPVLLTEAPLNP  NR KA+EV FESFN PA F++PQA+LSLYASGRTTGVVLD GDGVSHVVPVYE F LPHAI+R DVAGRDVT++LQLL RR+GY   TSAE ++V++IKE+ CY++F+P KEE+         P  P            +RLPDG  + +G E+FRAPEILF+P+LIGSE  GVH+C++Q+I++ADLDLRK  F QI+L+GGST+FPG+GDRLL+E RK AP+D+KIRISAPP R+YSTWIGGSILASL+TFK++WIT+ +Y+EHG  IVH +T+
Sbjct:    5 NQPVVVDNGSGVLKAGFAGGELPQVVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFSIKYAMEHGIVTDWERMQRIWEHMYSKDMLNIASDEHPVLLTEAPLNPAANRIKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVSHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYNFQTSAELEVVKEIKEKLCYVAFNPTKEEQLASHHAINDPTNPVGSSSSAHASSEYRLPDGNILQLGPEKFRAPEILFRPDLIGSEHTGVHDCLVQAILRADLDLRKTLFSQIILSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTI 392          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|813185991|ref|XP_012207167.1| (hypothetical protein SPRG_10947 [Saprolegnia parasitica CBS 223.65] >gi|641527867|gb|KDO22129.1| hypothetical protein SPRG_10947 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 241/381 (63.25%), Postives = 305/381 (80.05%), Query Frame = 0
Query:    6 NQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEE-----------APPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            NQP+V+DNG+G LKAGFAGG+ P+ VF S VG  KH+R+M GGA E  D  VG ++Q+HRG F   Y MEHG+V DW  M+++W H+YS+D LN+ SE+HPVLLTEAPLNP  NR KA+EV FESFN PA F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYE F LPHAI+R DVAGRDVT++LQLL RR+GY   TSAE +IV++IKE+ CY++F+P KEE+           A      +RLPDG+ + +G E+FRAPEILF+P+LIGSE  GV +C++ +I+++D+DLRK  F QIVL+GGST+FPG+GDRLL+E RK AP+D+KIRISAPP R+YSTWIGGSILASL+TFK++WIT+ +Y+EHG  IVH +TL
Sbjct:    5 NQPVVVDNGSGILKAGFAGGELPQAVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFTIKYAMEHGIVTDWDRMQRIWEHMYSKDMLNITSEEHPVLLTEAPLNPAANRVKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVTHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYVFQTSAELEIVKEIKEKLCYVAFNPAKEEQLAHAAGDTPSSAAQASSEYRLPDGSVLNLGPEKFRAPEILFRPDLIGSEYTGVQDCLVHAILRSDMDLRKTLFSQIVLSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTL 385          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|698786704|ref|XP_009826384.1| (hypothetical protein H257_03817 [Aphanomyces astaci] >gi|574119212|gb|ETV84692.1| hypothetical protein H257_03817 [Aphanomyces astaci])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 240/384 (62.50%), Postives = 305/384 (79.43%), Query Frame = 0
Query:    6 NQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQ--------------PDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            NQP+V+DNG+G LKAGFAGG+ P+VVF S VG  KH+R+M GGA E  D  VG ++Q+HRG F   Y MEHG+V DW  M+++W H+YS+D LN+ S++HPVLLTEAPLNP  NR KA+EV FESFN PA F++PQA+LSLYASGRTTGVVLD GDGVSHVVPVYE F LPHAI+R DVAGRDVT++LQLL RR+GY   TSAE ++V++IKE+ CY++F+P KEE+                     +RLPDG  + +G E+FRAPEILF+P+LIGSE  GV +C++Q+I++ADLDLR+  F QI+L+GGST+FPG+GDRLL+E RK AP+D+KIRISAPP R+YSTWIGGSILASL+TFK++WIT+ +Y+EHG  IVH +T+
Sbjct:    5 NQPVVVDNGSGVLKAGFAGGELPQVVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFSIKYAMEHGIVTDWDRMQRIWEHMYSKDMLNITSDEHPVLLTEAPLNPAANRVKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVSHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYNFQTSAELEVVKEIKEKLCYVAFNPTKEEQLASHHSISDATSGNPSHASSEYRLPDGNILQLGPEKFRAPEILFRPDLIGSEHTGVQDCLVQAILRADLDLRRTLFSQIILSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTI 388          
BLAST of EWM28289.1 vs. NCBI_GenBank
Match: gi|669136804|ref|XP_008603970.1| (hypothetical protein SDRG_00277 [Saprolegnia diclina VS20] >gi|530744305|gb|EQC42547.1| hypothetical protein SDRG_00277 [Saprolegnia diclina VS20])

HSP 1 Score: 523.472 bits (1347), Expect = 0.000e+0
Identity = 242/381 (63.52%), Postives = 306/381 (80.31%), Query Frame = 0
Query:    6 NQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEE-APPQPDT----------FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
            NQP+V+DNG+G LKAGFAGG+ P+ VF S VG  KH+R+M GGA E  D  VG ++Q+HRG F   Y MEHG+V DW  M+++W H+YS+D LN+ SE+HPVLLTEAPLNP  NR KA+EV FESFN PA F++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYE F LPHAI+R DVAGRDVT++LQLL RR+GY   TSAE +IV++IKE+ CY++F+P KEE+ A    D           +RLPDG+ + +G E+FRAPEILF+P+LIGSE  GV +C++ +I+++D+DLRK  F QIVL+GGST+FPG+GDRLL+E RK AP+D+KIRISAPP R+YSTWIGGSILASL+TFK++WIT+ +Y+EHG  IVH +TL
Sbjct:    5 NQPVVVDNGSGILKAGFAGGELPQAVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFSIKYAMEHGIVTDWDRMQRIWEHMYSKDMLNITSEEHPVLLTEAPLNPAANRVKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVTHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYVFQTSAELEIVKEIKEKLCYVAFNPAKEEQLAHAAGDAPSSAAQASSEYRLPDGSVLNLGPEKFRAPEILFRPDLIGSEYTGVQDCLVHAILRSDMDLRKTLFSQIVLSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTL 385          
The following BLAST results are available for this feature:
BLAST of EWM28289.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110634|gb|EWM28289.1|0.000e+0100.00arp1 actin-related protein 1 centractin beta [Nann... [more]
gi|953486866|emb|CEG48928.1|0.000e+062.88alpha-centractin [Plasmopara halstedii][more]
gi|675163267|ref|XP_008890518.1|0.000e+062.88hypothetical protein PPTG_00774 [Phytophthora para... [more]
gi|301121026|ref|XP_002908240.1|0.000e+063.13actin-like protein [Phytophthora infestans T30-4] ... [more]
gi|299116747|emb|CBN74860.1|0.000e+065.43conserved unknown protein [Ectocarpus siliculosus][more]
gi|695404136|ref|XP_009523456.1|0.000e+064.71hypothetical protein PHYSODRAFT_259446 [Phytophtho... [more]
gi|673033540|ref|XP_008870731.1|0.000e+062.89hypothetical protein H310_07170 [Aphanomyces invad... [more]
gi|813185991|ref|XP_012207167.1|0.000e+063.25hypothetical protein SPRG_10947 [Saprolegnia paras... [more]
gi|698786704|ref|XP_009826384.1|0.000e+062.50hypothetical protein H257_03817 [Aphanomyces astac... [more]
gi|669136804|ref|XP_008603970.1|0.000e+063.52hypothetical protein SDRG_00277 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2480rna2480Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications