EWM28196.1, cds2451 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|585110541|gb|EWM28196.1| (glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 1313.9 bits (3399), Expect = 0.000e+0 Identity = 641/641 (100.00%), Postives = 641/641 (100.00%), Query Frame = 0
Query: 1 MQGANLICALGRPKGALWQRLSLPTRDLLLADRISTGSSSPFSSFSSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFLHAAHGTAADKP 641
MQGANLICALGRPKGALWQRLSLPTRDLLLADRISTGSSSPFSSFSSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFLHAAHGTAADKP
Sbjct: 1 MQGANLICALGRPKGALWQRLSLPTRDLLLADRISTGSSSPFSSFSSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFLHAAHGTAADKP 641
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|1197266891|ref|WP_086510929.1| (choline dehydrogenase [Halomonas desiderata] >gi|1194961237|gb|OUE39618.1| choline dehydrogenase [Halomonas desiderata SP1]) HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0 Identity = 317/583 (54.37%), Postives = 396/583 (67.92%), Query Frame = 0
Query: 50 YDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGS--ALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+DYIVVG G+AGCL+ANRLS +P +VLL+EAGG D +VHIPVGYL+ I+NPR DWCF+TEP GL+GRSL YPRGK LGGCSSINGM+Y+RGQA DYDGWA++ +D+ W W LPDF K ED R EGGD + HG GGEWR+EKQRL W+VLD F +A + G+P+ DFN G+N G YF VNQR GWRWN +KA+L P+ +R N T+ V ++L D + G A GVE R+ G V R A E ILAAGA+GSP LLQLSG+GP A L +P+ H L GVG NLQDHLQ+R V++++G TLN ASW G+ K+G+EYL R GP+SMAPSQ+ +F +S P++E+HVQPLSL+ FG+PLH +PA TASVC+L PTSRGSV +++RDPR P I PNYL+T +DR VAA +LR+TRR+ AF ++PEE PG+ QS +L AG +GTTIFHP GT KMGR DDP+AV+D++LRVRG+E LRV D S MP ITSGNT+SPTLMIAEKA+ ++
Sbjct: 6 FDYIVVGAGTAGCLLANRLSADPANRVLLIEAGGRDN-YHWVHIPVGYLYCINNPRTDWCFKTEPDKGLNGRSLIYPRGKTLGGCSSINGMLYLRGQARDYDGWAELVGDDD------------------------WRWENCLPDFMKHEDHY---------RLDEGGD----ADAAHRDYHGHGGEWRIEKQRLKWEVLDDFAEAAVQAGVPRTRDFNRGDNEGVDYFEVNQRDGWRWNAAKAFLRPVCEKRDNFTLWHSTQVHRLLFDTAEGKPRASGVELERN----GTVSRVSAKREVILAAGAIGSPQLLQLSGIGPAALLAEHGIPLVHELPGVGENLQDHLQIRSVYKVTGAKTLNTLAASWLGKAKIGMEYLLRRTGPMSMAPSQLCIFTRSSDEYEHPNIEYHVQPLSLEAFGQPLHDYPAITASVCNLNPTSRGSVRIKSRDPRQAPAIAPNYLSTEEDRRVAADSLRVTRRIA-EQPAFAKYRPEEVKPGVQYQSDEDLARLAGDIGTTIFHPVGTAKMGRGDDPMAVVDSRLRVRGVEGLRVVDASVMPTITSGNTNSPTLMIAEKAAAWI 545
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|759953202|ref|WP_043637713.1| (choline dehydrogenase [Chromobacterium haemolyticum]) HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0 Identity = 339/584 (58.05%), Postives = 396/584 (67.81%), Query Frame = 0
Query: 47 STTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ T+DYI+VG GSAGCL+ANRLS NP ++VLLLEAGG+D P++HIPVGYL+ I NPR DWC +T P PGL GRSL YPRGK+LGGCSSINGMIYMRGQA DYDGWA G G WSW VLPDF + ED A Q HG GGEWRVE+QRLSW++LD FRDA E+ GI V+DFN G+N G YF VNQRGG RWNT+KA+L P +R NLTVLTH +LL+ +G A+G+ F + R E ILAAGAVGSP LLQ SG+GP A L+ V V+HAL GVGANLQDHLQLRMVF++SG TLN SW G++ MG EYLW R GPL+MAPSQ+G F KS + R +LE+HVQPLSL+RFGEPLHPFPAFTASVC L+P SRG V + A P IQPNYL+ +DRAVA ALRLTRR+V + A ++PEEY PG+A QS EL AAGR+GTTIFHP GTCKMG+ D AV+DA+LRV G+ LRV D S MP ITSGNT+SPTLMIAEKAS +
Sbjct: 5 AETFDYIIVGAGSAGCLLANRLSRNPRLRVLLLEAGGEDN-YPWIHIPVGYLYCIGNPRTDWCLRTAPEPGLGGRSLNYPRGKVLGGCSSINGMIYMRGQAADYDGWAA--------QGCPG-----------------WSWDEVLPDFLRMEDHFDSARAQ----------------------HGHGGEWRVERQRLSWEILDAFRDAAEQSGIAPVDDFNRGDNAGCGYFEVNQRGGLRWNTAKAFLRPAR-QRPNLTVLTHAEAETLLLE--DGRAIGIAFLQQRQRWQARCRG----EIILAAGAVGSPLLLQRSGIGPAALLQEHGVAVRHALPGVGANLQDHLQLRMVFKVSGARTLNQLANSWTGKLAMGWEYLWRRSGPLAMAPSQLGAFAKSGPEQPRANLEYHVQPLSLERFGEPLHPFPAFTASVCDLRPLSRGRVAIGGAGLDAAPLIQPNYLSHPQDRAVAVAALRLTRRIV-AAPALTRYRPEEYLPGLAAQSDEELAAAAGRIGTTIFHPVGTCKMGQDTD--AVVDARLRVHGLSGLRVADASIMPSITSGNTNSPTLMIAEKASRMI 530
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|498315346|ref|WP_010629502.1| (choline dehydrogenase [Halomonas sp. KM-1]) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 319/589 (54.16%), Postives = 395/589 (67.06%), Query Frame = 0
Query: 45 FSSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGS---ALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ +DYIVVG G+AGCL+ANRLS +P +VLL+EAGG D +VHIPVGYL+ I+NPR DWCF+TEP GL+GRSL YPRGK LGGCSSINGM+Y+RGQA DYDGWA++ +D+ W W LPDF K ED R EGGD + HG GGEWRVEKQRL W+VLD F +A E GIP+ DFN G+N G YF VNQR GWRWN +KA+L P+ +R+N T+ V ++L D A GVE R+ G V R A E ILAAGA+GSP LLQLSG+GP A L +P+ H L GVG NLQDHLQ+R V++++G TLN ASW G+ K+G+EYL R GP+SMAPSQ+ +F +S P++E+HVQPLSL+ FG+PLH +PA TASVC+L PTSRGSV +++RDPR P I PNYL+T +DR VAA +LR+TRR+ AF ++PEE PG+ QS +L AG +GTTIFHP GT KMGR DDP+AV+D+ LRVRG+E LRV D S MP ITSGNT+SPTLMIAEKA+ ++
Sbjct: 1 MAEQEFDYIVVGAGTAGCLLANRLSADPANRVLLIEAGGRDN-YHWVHIPVGYLYCINNPRTDWCFKTEPDKGLNGRSLIYPRGKTLGGCSSINGMLYLRGQARDYDGWAELVGDDD------------------------WRWENCLPDFMKHEDHY---------RLDEGGD----ADAAHRDYHGHGGEWRVEKQRLKWEVLDDFAEAAVEAGIPRTRDFNRGDNEGVDYFEVNQRDGWRWNAAKAFLRPVCEKRSNFTLWHSAQVHRLLFDTDESGKPRATGVELERN----GSVSRVKAKREVILAAGAIGSPQLLQLSGIGPAALLAEHGIPLVHELPGVGENLQDHLQIRSVYKVTGAKTLNTLAASWLGKAKIGMEYLLRRTGPMSMAPSQLCIFTRSSDEYEHPNIEYHVQPLSLEAFGQPLHDYPAITASVCNLNPTSRGSVRIKSRDPRQAPAIAPNYLSTEEDRRVAADSLRVTRRIA-EQPAFAKYRPEEVKPGVQYQSDEDLARLAGDIGTTIFHPVGTAKMGRDDDPMAVVDSHLRVRGVEGLRVVDASVMPTITSGNTNSPTLMIAEKAAAWI 546
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|515278972|ref|WP_016836179.1| (GMC family oxidoreductase [Herbaspirillum lusitanum]) HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 321/590 (54.41%), Postives = 409/590 (69.32%), Query Frame = 0
Query: 46 SSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGS--ALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFLHAA 633
S+ YDYI+VGGG+AGC++ANRLS + +KVLL+EAG D + ++HIPVGYL+ I+NPR DW ++TE GL+GRSL YPRGK+LGGCSSINGMIYMRGQ DY+ WAQ+ +D W W VLP F KSED YK S D HG GGEWRVEKQRLSW++LD FRDA E GIPK++DFN G+N GSSYF VNQ+ G RWN SKA+L P M + NL V+T HV ++ +++ + +GVEF G G A A ETILAAGAVGSPH+LQLSG+GP A L+ +PV L+GVG NLQDHLQ+RM F++ G+ TLN +W+G++ +GV+Y + GP+SMAPSQ+GVF KS+A++ +LE+HVQPLSL++FG+PLHPFPAFTASVC+L+PTSRG + L + D P+I NYL+T DR VAA +L+LTR++V + A ++P+E PG+ QS+ EL +AAG +GTTIFHP GTCKMGRADD AV+D++LRVRG+ LRV D S MP ITSGNT+SPTLMIAEKA++ + AA
Sbjct: 3 SAGKYDYIIVGGGTAGCVLANRLSRDAGIKVLLIEAGAKDDYL-WIHIPVGYLYCINNPRTDWLYRTEADVGLNGRSLIYPRGKVLGGCSSINGMIYMRGQERDYNEWAQLSGDDS------------------------WRWDRVLPLFRKSEDH------------------YKGS----DEFHGAGGEWRVEKQRLSWEILDAFRDAAAETGIPKIDDFNRGHNEGSSYFDVNQKRGIRWNASKAFLKPAM-KNGNLDVMTGSHVKRLRIEQRDTGPVCVGVEF----TGGGSEWYAEATSETILAAGAVGSPHILQLSGIGPAALLQQHQIPVVKDLAGVGENLQDHLQIRMAFKVKGVKTLNMMAGNWYGKMMIGVQYAMFQSGPMSMAPSQLGVFAKSDASQSSANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSNDGALAPKITLNYLSTEADRKVAADSLKLTRKIV-SAPALRKYQPDECKPGVEYQSEEELYKAAGEIGTTIFHPVGTCKMGRADDAQAVVDSQLRVRGVGGLRVVDASVMPTITSGNTNSPTLMIAEKAAELIRAA 539
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|1174878386|ref|WP_081555421.1| (choline dehydrogenase [Chromobacterium haemolyticum] >gi|1173998224|gb|OQS40766.1| choline dehydrogenase [Chromobacterium haemolyticum]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 338/584 (57.88%), Postives = 396/584 (67.81%), Query Frame = 0
Query: 47 STTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ T+DYI+VG GSAGCL+ANRLS NP ++VLLLEAGG+D P++HIPVGYL+ I NPR DWC +T P PGL GRSL +PRGK+LGGCSSINGMIYMRGQA DYDGWA G G WSW VLPDF + ED A Q HG GGEWRVE+QRLSW++LD FRDA E+ GI V+DFN G+N G YF VNQRGG RWNT+KA+L P +R NLTVLTH +LL+ +G A+G+ F + R E ILAAGAVGSP LLQ SG+GP A L+ V V+HAL GVGANLQDHLQLRMVF++SG TLN SW G++ MG EYLW R GPL+MAPSQ+G F KS + R +LE+HVQPLSL+RFGEPLHPFPAFTASVC L+P SRG V + A P IQPNYL+ +DRAVA ALRLTRR+V + A ++PEEY PG+A QS EL AAGR+GTTIFHP GTCKMG+ D AV+DA+LRV G+ LRV D S MP ITSGNT+SPTLMIAEKAS +
Sbjct: 5 AETFDYIIVGAGSAGCLLANRLSRNPRLRVLLLEAGGEDN-YPWIHIPVGYLYCIGNPRTDWCLRTAPEPGLGGRSLNHPRGKVLGGCSSINGMIYMRGQAADYDGWAA--------QGCPG-----------------WSWDEVLPDFLRMEDHFDSARAQ----------------------HGHGGEWRVERQRLSWEILDAFRDAAEQSGIAPVDDFNRGDNAGCGYFEVNQRGGLRWNTAKAFLRPAR-QRPNLTVLTHAEAETLLLE--DGRAIGIAFLQQRQRWQARCRG----EIILAAGAVGSPLLLQRSGIGPAALLQEHGVAVRHALPGVGANLQDHLQLRMVFKVSGARTLNQLANSWTGKLAMGWEYLWRRSGPLAMAPSQLGAFAKSGPEQPRANLEYHVQPLSLERFGEPLHPFPAFTASVCDLRPLSRGRVAIGGAGLDAAPLIQPNYLSHPQDRAVAVAALRLTRRIV-AAPALTRYRPEEYLPGLAAQSDEELAAAAGRIGTTIFHPVGTCKMGQDTD--AVVDARLRVHGLSGLRVADASIMPSITSGNTNSPTLMIAEKASRMI 530
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|1090760917|emb|SEF91047.1| (choline dehydrogenase [Halomonas daqingensis]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 316/588 (53.74%), Postives = 397/588 (67.52%), Query Frame = 0
Query: 45 FSSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGS--ALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ +DYIVVG G+AGCL+ANRLS +P +VLL+EAGG D +VHIPVGYL+ I+NPR DWCF+TEP GL+GRSL YPRGK LGGCSSINGM+Y+RGQA DYDGWA++ +D+ W W LPDF K ED R EGGD + HG GGEWR+EKQRL W+VLD F +A + GIP+ DFN G+N G YF VNQR GWRWN +KA+L P+ +R+N T+ V ++L D + G A GVE R+ G + R A E ILAAGA+GSP LLQLSG+GP A L +P+ H L GVG NLQDHLQ+R V++++G TLN ASW G+ K+G+EYL R GP+SMAPSQ+ +F +S P++E+HVQPLSL+ FG+PLH +PA TASVC+L PTSRGSV +++RDPR P I PNYL+T +DR VAA +LR+TRR+ AF ++PEE PG+ QS +L AG +GTTIFHP GT KMG DDP+AV+D++LRVRG+E LRV D S MP ITSGNT+SPTLMIAEKA+ ++
Sbjct: 1 MAEQEFDYIVVGAGTAGCLLANRLSADPANRVLLIEAGGRDN-YHWVHIPVGYLYCINNPRTDWCFKTEPDKGLNGRSLIYPRGKTLGGCSSINGMLYLRGQARDYDGWAELVGDDD------------------------WRWENCLPDFMKHEDHY---------RLDEGGD----ADAAHRDYHGHGGEWRIEKQRLKWEVLDDFAEAAVQAGIPRTRDFNRGDNEGVDYFEVNQRDGWRWNAAKAFLRPVCEKRSNFTLWHSTQVHRLLFDTAEGKPRASGVELERN----GTISRVSAKREVILAAGAIGSPQLLQLSGIGPAALLAEHGIPLVHELPGVGENLQDHLQIRSVYKVTGAKTLNTLAASWLGKAKIGMEYLLRRTGPMSMAPSQLCIFTRSSDEYEHPNIEYHVQPLSLEAFGQPLHDYPAITASVCNLNPTSRGSVRIKSRDPRHAPAIAPNYLSTEEDRRVAADSLRVTRRIA-EQPAFAKYRPEEVKPGVQYQSDEDLARLAGDIGTTIFHPVGTAKMGGDDDPMAVVDSRLRVRGVEGLRVVDASVMPTITSGNTNSPTLMIAEKAAAWI 545
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|860399058|ref|WP_048412024.1| (choline dehydrogenase [Chromobacterium sp. LK1] >gi|857253771|gb|KMN29709.1| choline dehydrogenase [Chromobacterium sp. LK1]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 339/584 (58.05%), Postives = 395/584 (67.64%), Query Frame = 0
Query: 47 STTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ T+DYI+VG GSAGCL+ANRLS NP ++VLLLEAGG+D P++HIPVGYL+ I NPR DWC +T P PGL GRSL YPRGK+LGGCSSINGMIYMRGQA DYDGWA G G WSW VLPDF + ED A Q HG GGEWRVE+QRLSW++LD FRDA E+ GI V+DFN G+N G YF VNQRGG RWNT+KA+L P +R NLTVLTH +LL+ +G A+G+ F + R E ILAAGAVGSP LLQ SG+GP A L+ V V+HAL GVGANLQDHLQLRMVF++SG TLN SW G++ MG EYLW R GPL+MAPSQ+G F KS + R +LE+HVQPLSL+RFGEPLHPFPAFTASVC L+P SRG V + A P IQPNYL+ +DRAVA ALRLTRR+V + A ++PEEY PG A QS EL AAGR+GTTIFHP GTCKMG+ D AV+DA+LRV G+ LRV D S MP ITSGNT+SPTLMIAEKAS +
Sbjct: 5 ADTFDYIIVGAGSAGCLLANRLSRNPRLRVLLLEAGGEDN-YPWIHIPVGYLYCIGNPRTDWCLRTAPEPGLGGRSLNYPRGKVLGGCSSINGMIYMRGQAADYDGWAA--------QGCPG-----------------WSWDEVLPDFLRMEDHFDSARAQ----------------------HGHGGEWRVERQRLSWEILDAFRDAAEQSGIAPVDDFNRGDNAGCGYFEVNQRGGLRWNTAKAFLRPAR-QRPNLTVLTHAEAETLLLE--DGRAIGIAFLQQRQRWQARCRG----EIILAAGAVGSPLLLQRSGIGPAALLQEHGVAVRHALPGVGANLQDHLQLRMVFKVSGARTLNQLANSWTGKLAMGWEYLWRRSGPLAMAPSQLGAFAKSGPEQPRANLEYHVQPLSLERFGEPLHPFPAFTASVCDLRPLSRGRVAIGGAGLDAAPLIQPNYLSHPQDRAVAVTALRLTRRIV-AAPALTRYRPEEYLPGPAAQSDEELAAAAGRIGTTIFHPVGTCKMGQDTD--AVVDARLRVHGLSGLRVADASIMPSITSGNTNSPTLMIAEKASRMI 530
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|517929863|ref|WP_019100071.1| (MULTISPECIES: hypothetical protein [Chromobacterium] >gi|1173994904|gb|OQS37473.1| choline dehydrogenase [Chromobacterium haemolyticum]) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 338/584 (57.88%), Postives = 396/584 (67.81%), Query Frame = 0
Query: 47 STTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
+ T+DYI+VG GSAGCL+ANRLS NP +VLLLEAGG+D P++HIPVGYL+ I NPR DWC +T P PGL GRSL YPRGK+LGGCSSINGMIYMRGQA DYDGWA G G WSW VLPDF + ED A Q HG GGEWRVE+QRLSW++LD FRDA E+ GI V+DFN G+N G YF VNQRGG RWNT+KA+L P +R NLTVLTH +LL+ +G A G+ F + R E ILAAGAVGSP LLQ SG+GP A L+ V V+HAL+GVGANLQDHLQLRMVF++SG TLN SW G++ MG EYLW R GPL+MAPSQ+G F KS+ + R +LE+HVQPLSL+RFGEPLHPFPAFTASVC L+P SRG + + A P IQPNYL+ +DRAVA ALRLTRR+V + A ++PEEY PG+A QS EL AAGR+GTTIFHP GTCKMG+ D AV+DA+LRV G+ LRV D S MP ITSGNT+SPTLMIAEKAS +
Sbjct: 5 ADTFDYIIVGAGSAGCLLANRLSLNPRHRVLLLEAGGEDN-YPWIHIPVGYLYCIGNPRTDWCLRTAPEPGLGGRSLNYPRGKVLGGCSSINGMIYMRGQAADYDGWAA--------QGCPG-----------------WSWDEVLPDFLRMEDHFDSARAQ----------------------HGHGGEWRVERQRLSWEILDAFRDAAEQSGIAPVDDFNRGDNAGCGYFEVNQRGGLRWNTAKAFLRPAR-QRPNLTVLTHAEAETLLLE--DGRAAGMVFLQHRQRWQARCRG----EIILAAGAVGSPLLLQRSGIGPAALLQEHGVAVRHALAGVGANLQDHLQLRMVFKVSGARTLNQLANSWAGKLAMGWEYLWRRSGPLAMAPSQLGAFAKSDVEQPRANLEYHVQPLSLERFGEPLHPFPAFTASVCDLRPLSRGRIAIGGAGLDAAPLIQPNYLSHPQDRAVAVAALRLTRRIV-AAPALTRYRPEEYLPGLAAQSDEELAAAAGRIGTTIFHPVGTCKMGQDTD--AVVDARLRVHGLSGLRVADASIMPSITSGNTNSPTLMIAEKASRMI 530
BLAST of EWM28196.1 vs. NCBI_GenBank
Match: gi|930613339|ref|WP_054265458.1| (choline dehydrogenase [Janthinobacterium sp. CG23_2] >gi|955155333|emb|CUI06366.1| Choline dehydrogenase [Janthinobacterium sp. CG23_2] >gi|962729181|emb|CUU30152.1| Choline dehydrogenase [Janthinobacterium sp. CG23_2]) HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0 Identity = 313/587 (53.32%), Postives = 409/587 (69.68%), Query Frame = 0
Query: 46 SSTTYDYIVVGGGSAGCLVANRLSENPHVKVLLLEAGGDDRRIPFVHIPVGYLWSISNPRVDWCFQTEPVPGLHGRSLAYPRGKILGGCSSINGMIYMRGQAEDYDGWAQIFAEDETRVGAKGANVKRKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDLYKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSAL--GVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFL 630
S+ YDYI+VGGG+AGC++ANRL+ VLL+EAGG D + ++HIPVGYL I NPR DW ++TEP GL+GRSL YPRGK+LGG SSINGMIYMRGQ+ DYD WA++ G+ G WSW VLP F KSED+ GAS +HG GGEWRVEKQRLSW++LD FRDA E+ GI K EDFNGG+N G +YF VNQ+ G RWNT+KA+L P +R NLT++T HV ++++D + + GVEF G G A A ET+L AGAVGSP +LQLSG+GP A LR A + ++ GVG NLQDHLQLRM++++S TLN ASW+G++K+G+EY + GP+SMAPSQ+G F +S+ + P+L++HVQPLSL++FG+PLHPFPAFTASVC+L+PTSRG V + + D A P+I PNYL+T +DR AA AL LTR++V + A + P+E+ PG+A +++ EL EAA ++GTTIFHP GTCKMGRA DP+AV+D+ LRV G+++LRV D S MP+ITSGNT+SPT+MIAE+A++ +
Sbjct: 3 SAGEYDYIIVGGGTAGCVLANRLTRRRDTTVLLIEAGGRDDYV-WIHIPVGYLHCIGNPRTDWLYKTEPDAGLNGRSLIYPRGKVLGGSSSINGMIYMRGQSHDYDHWAEL----------------------TGDTG--WSWDKVLPLFKKSEDYHGGAS----------------------ELHGHGGEWRVEKQRLSWQLLDAFRDAAEQTGIRKTEDFNGGDNEGCNYFDVNQKRGIRWNTAKAFLKP-AAKRDNLTIMTGCHVERLIIDDTEQGKVCRGVEF----TGGGTAFTATAIRETVLTAGAVGSPQILQLSGIGPSALLRDAGIALQVDAPGVGDNLQDHLQLRMIYKVSNARTLNTTAASWFGKMKIGIEYAMFQSGPMSMAPSQLGAFARSDPGQATPNLQYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHVRIASADSYAAPKITPNYLSTEQDRKTAAAALTLTRKIV-AAPAMARYAPQEFKPGMAFRTEEELAEAASQIGTTIFHPVGTCKMGRAGDPMAVVDSALRVNGVQKLRVVDASVMPLITSGNTNSPTIMIAERAAELI 536 The following BLAST results are available for this feature:
BLAST of EWM28196.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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