EWM30428.1, cds245 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|585113089|gb|EWM30428.1| (putative alpha-ketoglutarate-dependent dioxygenase abh7 [Nannochloropsis gaditana]) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MVWPTSWQIPCHASCLVLYIHRMVFKLSYFAFRSGAGRWMYTLVLKCGRLRSGPAYRMIALSASGESPFIDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDEREDQGRREEACETDMKKKQHE 291 MVWPTSWQIPCHASCLVLYIHRMVFKLSYFAFRSGAGRWMYTLVLKCGRLRSGPAYRMIALSASGESPFIDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDEREDQGRREEACETDMKKKQHE Sbjct: 1 MVWPTSWQIPCHASCLVLYIHRMVFKLSYFAFRSGAGRWMYTLVLKCGRLRSGPAYRMIALSASGESPFIDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDEREDQGRREEACETDMKKKQHE 291
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|985421181|ref|XP_015376001.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial [Diuraphis noxia]) HSP 1 Score: 149.828 bits (377), Expect = 3.411e-40 Identity = 73/189 (38.62%), Postives = 122/189 (64.55%), Query Frame = 0 Query: 83 SSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRP-RSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDE 270 SS ++PD+++++EE+RL+ E+E +++R RY +HWD I YRE E W D N+ + Q++K+ + N+S+ + VH++DL +G++KPH+DS +F G ++ GLSL S ++M+L + + PD+ V L P RSLYI+ +ARY+Y HEIL+ +G R++ R RR+S++ R+E Sbjct: 70 SSFTIVPDIVSVDEESRLIDEIEKSLKRLRYQHDHWDDAIHGYRETEIITWKDQNNSNVIQKLKNRVFA--NESITEQMQRVHILDLCNNGYVKPHIDSVRFCGNIIAGLSLLSDSVMRLADE----KCPDTYVVYALLPRRSLYIMKDSARYQYTHEILS---DGAPTVFSDRQIVRERRVSIVMRNE 249
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|1210520941|dbj|GAX20174.1| (alkylated DNA repair protein alkB homolog 7 [Fistulifera solaris]) HSP 1 Score: 146.747 bits (369), Expect = 8.253e-40 Identity = 92/207 (44.44%), Postives = 119/207 (57.49%), Query Frame = 0 Query: 69 FIDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVR----LLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDER 271 +D S+ DN D S V PDVIT+ E LVA +E ++RRRY HWDSVI +Y+EVE +N + +RI+ + K + +LP H IDL +DG + HVDS +FSG LV GLSL SS+IM+LK D NPD V+ L L RSLY+L G +RY Y HE+L R G V R RR+S+IFRD + Sbjct: 1 MVDNSHAPDN-FDQQSAVVFPDVITVSEHDALVAHVEPLLKRRRYEKGHWDSVILQYKEVELAEEASAVN-DVFERIRKELEPY--KRMEAPWLPCHAIDLRKDGELNEHVDSVRFSGDLVAGLSLLSSSIMRLKPDA--STNPDESVKGHVDLYLPSRSLYVLSGVSRYSYTHELLPGR-----SLFKGNAVDRDRRISIIFRDAK 196
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|328696562|ref|XP_001942777.2| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial [Acyrthosiphon pisum]) HSP 1 Score: 148.288 bits (373), Expect = 1.354e-39 Identity = 76/206 (36.89%), Postives = 127/206 (61.65%), Query Frame = 0 Query: 72 FSNCRDNTLD------SSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRP-RSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDE 270 F C +N +D SS ++PD+++++EE+RL+ E+E +++R RY +HWD I YRE E W D N+ + Q++++ + +S+ + VHV+DL + G++KPH+DS +F G ++ GLSL S ++M+L + ++PD V L P RSLYI+ +ARY+Y HEIL+ +G R++ R RR+S++ R+E Sbjct: 54 FPKCINNLVDIKLQQFDSSFTIVPDIVSVDEESRLIDEIEKSLKRLRYQHDHWDDAIHGYRETEIITWKDQNNSNVIQKLRN---RVFAESITEQMQRVHVLDLCDKGYVKPHIDSIRFCGNIIAGLSLLSDSVMRLADE----KHPDIYVVYALLPRRSLYIMKDSARYQYTHEILS---DGAPSVFSDRQIVRERRVSIVMRNE 249
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|1176303731|ref|XP_020654392.1| (alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial [Pogona vitticeps]) HSP 1 Score: 143.665 bits (361), Expect = 2.535e-38 Identity = 82/183 (44.81%), Postives = 109/183 (59.56%), Query Frame = 0 Query: 87 VLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRD 269 V+PD ++ EEA L E+E RRRRY HWD I +YRE EK W + +I QR++ L VHV+DL + G+IKPHVDS KF G + GLSL SS++M L + QNP+ + LLL RSLYIL G ARY + HEIL + EE + +GR++ R RR+S+I R+ Sbjct: 41 VVPDFLSEAEEALLAQEVEPQFRRRRYEDGHWDGAIHKYRETEKSHWSKE-SHEILQRVRDAAFPPGMPQLTQ----VHVLDLHKSGYIKPHVDSVKFCGCTIAGLSLLSSSVMHLVSE----QNPEDWLDLLLERRSLYILRGPARYEFTHEIL----KDEESFFNGRKITRERRISVICRN 210
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|669161248|ref|XP_008616186.1| (hypothetical protein SDRG_11910 [Saprolegnia diclina VS20] >gi|530732091|gb|EQC30333.1| hypothetical protein SDRG_11910 [Saprolegnia diclina VS20]) HSP 1 Score: 144.436 bits (363), Expect = 2.679e-38 Identity = 89/201 (44.28%), Postives = 120/201 (59.70%), Query Frame = 0 Query: 70 IDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQ-RIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRD 269 +D S C D L S ++V+ +VI+ ++E RL E +RRRRY +HWD VI ++E+E W A +A R SV+ L T F VHVIDLAE G+IKPHVDS KFSG +V G+SL S ++M+ K +V P + LL R RS Y + G RYRY HEIL G + + GR V+R+RR+S++FRD Sbjct: 34 VDRSLCCDPFLQPSDLQVMTEVISEDDEQRLADEAATLLRRRRYETDHWDQVIVNFKEMETTKWSAEAKAILAHLRSLSVMPPQL-----TYFPTVHVIDLAEAGYIKPHVDSIKFSGQIVAGISLLSPSVMRFKEEV----GPSQLDALLPR-RSFYCMSGGVRYRYTHEILP----GHQTF-QGRDVERTRRISIMFRD 219
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|698822193|ref|XP_009844125.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574100777|gb|ETV66350.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 144.821 bits (364), Expect = 2.974e-38 Identity = 89/204 (43.63%), Postives = 126/204 (61.76%), Query Frame = 0 Query: 66 ESPFIDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRD 269 +SP +D S C+D L + ++V+ DV+T++EE L E +RRRRY NHWD VI ++E+E W A I R+++ L L + L F PVHVIDLAE G+IKPHVDS KFSG +V GL+L S A+M+ + ++ D+ + LLL RS Y + G RYRY HEIL G + + G+ V+R+RR+S++ RD Sbjct: 67 DSPLVDRSMCKDAALVWNDLQVMQDVLTLDEERLLADEAAALLRRRRYEVNHWDQVIVNFKEMETVKWSQEA-ADILARVRT--LPILPQDLEY-FPPVHVIDLAEAGYIKPHVDSIKFSGQVVAGLNLLSPAVMRF-----EEEHGDNRIDLLLPRRSFYCMRGGVRYRYTHEILP----GVQHF-QGQPVERTRRISIMIRD 256
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|826488235|ref|XP_012539538.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial [Monomorium pharaonis]) HSP 1 Score: 143.28 bits (360), Expect = 6.421e-38 Identity = 80/194 (41.24%), Postives = 124/194 (63.92%), Query Frame = 0 Query: 83 SSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRI--KSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDEREDQ 274 +++RVLP+ I+ EEE +V E++ M+R RY +HWD+ I YRE E + W + ++K+ R+ K+ +T++ SL VH++DLA +G+IKPH+DS +F GG++ GLSL S ++M+L +G + + LL RSLYI+ G ARY+Y HEIL + EE + +GR V + RR+S+I R E + Q Sbjct: 54 NTMRVLPNFISEEEEDIMVQEVDPYMKRLRYEYSHWDNAIHGYRETEWKKWSEK-SSKVLDRVRRKAFPPETIHLSL------VHILDLAPEGWIKPHIDSVRFCGGIIAGLSLLSDSVMKL---AMEGHEKERVACFLLPRRSLYIMSGVARYKYNHEILKS----EESYFEGRHVPKGRRISIICRSEADPQ 233
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|568041098|gb|ETM38522.1| (hypothetical protein L914_15193 [Phytophthora parasitica]) HSP 1 Score: 142.51 bits (358), Expect = 1.553e-37 Identity = 91/237 (38.40%), Postives = 135/237 (56.96%), Query Frame = 0 Query: 43 LVLKCGRLRSGPAYRMIALSASGESPF---------IDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDE 270 L L+ R P R+++ SA P +D ++C D + ++++ DVIT +EE L E ++RRR+ NHWD VI +Y+E+E+ W +I Q+++ V + L + L T F VHVI+LAEDG+IKPHVDS KFSG +V G++L S +IM+ K E G DS++ LR RS+Y++ G RY Y HEIL G + + V R+ R+S++ RDE Sbjct: 2 LSLRPLRCSLVPLRRLLSSSAVAAPPSQSLWQDVYNLDATHCHDPLVSEDDLQLMLDVITDDEEKVLSDECARILKRRRFEENHWDDVIIKYKEMERSRW-STETQRILQKVREVAI--LPRDL-TYFPAVHVIELAEDGYIKPHVDSIKFSGRVVAGINLLSPSIMRFKE--EHG---DSVIDAYLRRRSMYMMTGRVRYHYTHEILP----GAQVFRGEVPVNRTHRISIMLRDE 225
BLAST of EWM30428.1 vs. NCBI_GenBank
Match: gi|568011189|gb|ETL85367.1| (hypothetical protein L917_15059 [Phytophthora parasitica]) HSP 1 Score: 142.51 bits (358), Expect = 1.747e-37 Identity = 91/237 (38.40%), Postives = 135/237 (56.96%), Query Frame = 0 Query: 43 LVLKCGRLRSGPAYRMIALSASGESPF---------IDFSNCRDNTLDSSSIRVLPDVITIEEEARLVAELEGNMRRRRYVANHWDSVIERYREVEKRAWIDPLNAKIAQRIKSVILQTLNKSLATRFLPVHVIDLAEDGFIKPHVDSSKFSGGLVCGLSLCSSAIMQLKGDVEQGQNPDSIVRLLLRPRSLYILCGNARYRYAHEILATRPEGEERWVDGRRVKRSRRLSLIFRDE 270 L L+ R P R+++ SA P +D ++C D + ++++ DVIT +EE L E ++RRR+ NHWD VI +Y+E+E+ W +I Q+++ V + L + L T F VHVI+LAEDG+IKPHVDS KFSG +V G++L S +IM+ K E G DS++ LR RS+Y++ G RY Y HEIL G + + V R+ R+S++ RDE Sbjct: 2 LSLRPLRCSLVPLRRLLSSSAVAAPPSQSLWQDVYNLDATHCHDPLVSEDDLQLMLDVITDDEEKVLSDECARILKRRRFEENHWDDVIIKYKEMERSRW-STETQRILQKVREVAI--LPRDL-TYFPAVHVIELAEDGYIKPHVDSIKFSGRVVAGINLLSPSIMRFKE--EHG---DSVIDAYLRRRSMYMMTGRVRYHYTHEILP----GAQVFRGEVPVNRTHRISIMLRDE 225 The following BLAST results are available for this feature:
BLAST of EWM30428.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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