EWM28190.1, cds2449 (CDS) Nannochloropsis gaditana

Overview
NameEWM28190.1
Unique Namecds2449
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:426019..426264 -
Alignment locationCM002459.1:425565..425894 -
Alignment locationCM002459.1:425266..425373 -
Alignment locationCM002459.1:424742..425093 -
Alignment locationCM002459.1:423753..424576 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28190.1
Productdna helicase
Orig transcript idgnl|cribi|Naga_100004g93.9121.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:426019..426264 -
CM002459.1supercontigCM002459.1:425565..425894 -
CM002459.1supercontigCM002459.1:425266..425373 -
CM002459.1supercontigCM002459.1:424742..425093 -
CM002459.1supercontigCM002459.1:423753..424576 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0008026ATP-dependent helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0016043cellular component organization
GO:0006310DNA recombination
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR011991WHTH_DNA-bd_dom
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR004589DNA_helicase_ATP-dep_RecQ
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|585110535|gb|EWM28190.1| (dna helicase [Nannochloropsis gaditana])

HSP 1 Score: 1281.93 bits (3316), Expect = 0.000e+0
Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0
Query:    1 MPWANETSQLYQPITSYFAGRQDRESSTSTGRYARRYDYMQEQDAANACLQPSPPRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHRIPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVRCEAGCDNCQRESAEYPEVSFLRWAQPFREGQGVKETSADNIGDHGAKGLEMGGLNAKRGFYVGAPARKGTMQLTFGNKSVGDRHVKAGLVQEEDDRWRSGVLMPWREYGGAGGKGYRDGEGKGMKEGDKAVGMVVIDEDN 619
            MPWANETSQLYQPITSYFAGRQDRESSTSTGRYARRYDYMQEQDAANACLQPSPPRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHRIPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVRCEAGCDNCQRESAEYPEVSFLRWAQPFREGQGVKETSADNIGDHGAKGLEMGGLNAKRGFYVGAPARKGTMQLTFGNKSVGDRHVKAGLVQEEDDRWRSGVLMPWREYGGAGGKGYRDGEGKGMKEGDKAVGMVVIDEDN
Sbjct:    1 MPWANETSQLYQPITSYFAGRQDRESSTSTGRYARRYDYMQEQDAANACLQPSPPRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHRIPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVRCEAGCDNCQRESAEYPEVSFLRWAQPFREGQGVKETSADNIGDHGAKGLEMGGLNAKRGFYVGAPARKGTMQLTFGNKSVGDRHVKAGLVQEEDDRWRSGVLMPWREYGGAGGKGYRDGEGKGMKEGDKAVGMVVIDEDN 619          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|813102408|ref|XP_012193810.1| (hypothetical protein SPRG_00320 [Saprolegnia parasitica CBS 223.65] >gi|641541728|gb|KDO35473.1| hypothetical protein SPRG_00320 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 410.223 bits (1053), Expect = 7.290e-135
Identity = 207/436 (47.48%), Postives = 292/436 (66.97%), Query Frame = 0
Query:   61 RGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVR-CEAGCDNCQRESAE 493
            R  QI  ANK +F N  FR +Q   I+A L+ +DVFV+MPTGGGKSLCYQLPA+++ G+T+VV+PL+SLIQDQV++L++     IPAA L+S T   L + I+RDL        P +KLLYVTPERL   +   Q++++L++  MLAR VVDEAHCVS WGHDFRPD+++LG  +  FP++P+MALTATA ++V+ +V K L +    PRA +       R NL FE+  K+ ++  A + + + ++ +        GIVYCMT+  +E +A++L D G  AD YHAG S ++R  V  AW  G+++++CATIA+GMGIDK +VR+V+H ++AK +EGY+QE GRAGRDG P+RC +FY + DV K+K++I  P   +G   K +A  +EKL  M D+CE+R  CRR  L  +FG     + C   CDNC+R  A 
Sbjct:   10 RDDQIARANKAIFGNDGFRRNQRDAIEATLKGQDVFVLMPTGGGKSLCYQLPAVLSPGITIVVSPLLSLIQDQVTSLVRNQPVGIPAAFLSSQTLAKLKKAIWRDLHR----PVPTLKLLYVTPERLAASDSLIQVLQSLHQRKMLARFVVDEAHCVSSWGHDFRPDYHKLGNLKDLFPTVPMMALTATAPQKVIENVKKVLKI----PRATI-FSMSFNRTNLAFEVIEKDPEEGKALEALFKYIKTKYDN--SVVGIVYCMTKQQSEDVANYLFDRGILADFYHAGQSSSDRELVQDAWQRGEIKVVCATIAYGMGIDKPDVRYVIHYAVAKCVEGYYQEAGRAGRDGNPSRCTIFYSRRDVVKMKSIINMP--KKGNNAKSRAVHMEKLEKMMDYCEDRTSCRRQYLVGYFGQTFNRKDCNKTCDNCKRVIAH 432          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|698823137|ref|XP_009844597.1| (hypothetical protein H257_17485 [Aphanomyces astaci] >gi|574100360|gb|ETV65942.1| hypothetical protein H257_17485 [Aphanomyces astaci])

HSP 1 Score: 403.29 bits (1035), Expect = 4.726e-132
Identity = 209/442 (47.29%), Postives = 287/442 (64.93%), Query Frame = 0
Query:   55 PRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVR-CEAGCDNCQRESAE 493
            P  R E   QI  AN+++F N +FR +Q   IQ  L ++DVFV+MPTGGGKSLCYQLPA++++GVT+VV+PL+SLIQDQV++L++     IPAA L+S T   L + + RDL        P IKLLYVTPE+L        L++ LN   MLAR VVDEAHCV+QWGHDFRPD+ +LG  ++ FP +P+MALTATA ++V+  V K L +    PRA +       R NL F++  KE ++  A   +   +  + +      GIVYCMT+  +E +A++L D G  AD YHAG S  +R  V  AW  GQ++++CATIA+GMGIDK +VR+V+H S+AKS+EGY+QE GRAGRDG P++C +FY + DV K++ +I  P   +G   K +   +EKL  M ++CEER  CRR  L  +FG     + C+  CDNC+R  A 
Sbjct:    7 PHGRPEPDDQISRANRHIFGNTTFRTNQRDAIQTTLNRQDVFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTSLVRNKPAGIPAAYLSSQTAVKLLKAVLRDLHR----PVPTIKLLYVTPEKLASSSSLISLLEDLNRREMLARFVVDEAHCVTQWGHDFRPDYNKLGRLKELFPDVPVMALTATAPQKVIDSVKKVLKI----PRATV-FTMSFNRTNLSFDVLEKENEESKALAQLHAYISSKYAN--NVVGIVYCMTKQQSEDVANYLFDRGIQADFYHAGQSSTDREMVQEAWQDGQIKVVCATIAYGMGIDKADVRYVLHYSVAKSIEGYYQEAGRAGRDGQPSQCTIFYNRRDVSKIRGIINMP--KKGNTMKTRGVHMEKLERMMEYCEERASCRRQFLVSYFGQTFNRKDCKKTCDNCRRVIAH 435          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|1173958453|gb|OQS04809.1| (bloom syndrome protein, DEAD/DEAH box helicase [Thraustotheca clavata])

HSP 1 Score: 402.519 bits (1033), Expect = 7.673e-132
Identity = 206/440 (46.82%), Postives = 284/440 (64.55%), Query Frame = 0
Query:   57 TRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYK-EAVRCEAGCDNCQRESAE 493
            T  E+  Q+  ANK +F N SFR +Q   I A L   DVFV+MPTGGGKSLCYQLPA+++ G+T+V++PL+SLIQDQV++LI+     IPAA L+S T   L + I++DL        P +KLLYVTPERL   +   Q+++ L++  MLAR VVDEAHCVSQWGHDFRPD+ +LG  +  FP++P+MALTATA ++V+ +V K L +    PRA +       R NL FE+  K+ D+  A   +   ++ +        GIVYCMT+  +E +A++L D G  AD YHAG S  +R  V  AW  G+++++CATIA+GMGIDK +VR+V+H S+AK +EGY+QE GRAGRDG P++C +FY + D+ K+K +I  P   +G   K +   ++KL  M D+CE+R  CRR  L  +FG       C   CDNC R  A 
Sbjct:    6 TTREKNDQVSRANKFIFGNDSFRRNQRDAIDATLDGEDVFVLMPTGGGKSLCYQLPAVISPGITIVISPLLSLIQDQVTSLIRNQPVGIPAAFLSSQTLAKLKKAIWKDLHR----PIPTLKLLYVTPERLAVSDSLIQVLENLHKRKMLARFVVDEAHCVSQWGHDFRPDYSKLGMLKDLFPTVPMMALTATAPQKVVDNVKKILKI----PRAMI-FSMSFNRTNLSFEVIEKDTDETKALATLYNHIKQKYDN--SVVGIVYCMTKQQSEDVANYLFDRGILADFYHAGQSSGDRELVQDAWQRGEIKVVCATIAYGMGIDKPDVRYVIHYSVAKCIEGYYQEAGRAGRDGKPSQCTIFYNRRDILKIKGIINMP--RKGNNAKSRGVHMDKLEKMMDYCEDRTSCRRQALVAYFGQTFNRKECNKTCDNCNRLIAH 432          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|970652233|gb|KUF90934.1| (ATP-dependent DNA helicase Q 1 [Phytophthora nicotianae])

HSP 1 Score: 406.371 bits (1043), Expect = 8.388e-132
Identity = 206/425 (48.47%), Postives = 285/425 (67.06%), Query Frame = 0
Query:   68 ANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYK-EAVRCEAGCDNCQR 489
            AN+ VF N  FR +Q  +I+A ++  D FV+MPTGGGKSLCYQLPA++++GVT+VV+PL+SLIQDQV+ALI+     IPAA L S T  TL R I  +L        P++KLLY+TPE+++       L+K L+ + MLAR V+DEAHCVSQWGHDFRP++ +LG  +K FP++P+MALTATA  +V+  V K+L + N G    +       R NL FE+R K R  +    + L      T+      GIVYCMT+ D E +A++L D+G SAD YHAG S  +R  V  AW  GQ+ I+CATIA+GMGI+K +VR+V+H S+AKS+EGY+QE GRAGRDG P++C+LFY   DV K++ ++  P   +G  KK +A  +EKL++M ++CE+   CRR +L  +FG + +   C   CDNC+R
Sbjct:  115 ANRKVFGNDGFRKNQREVIEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTSLTLKRSITAELKC----SAPSVKLLYLTPEKVIKSPEMMDLLKDLHRNKMLARFVIDEAHCVSQWGHDFRPEYNQLGILKKTFPTVPLMALTATAPPKVIDHVKKSLMISN-GHVFSMSFN----RQNLTFEVRDKPRGGDKKAMEAL-YQHISTTYAPDAVGIVYCMTKQDCEDVANYLFDHGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCILFYSPRDVSKMRNILSMP--QKGMTKKTRAVHMEKLKSMAEYCEDDTTCRRQLLISYFGQQFQRSDCNRTCDNCRR 527          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|675177819|ref|XP_008897794.1| (hypothetical protein PPTG_05818 [Phytophthora parasitica INRA-310] >gi|566009853|gb|ETI32764.1| hypothetical protein F443_20493 [Phytophthora parasitica P1569] >gi|567947321|gb|ETK73105.1| hypothetical protein L915_19930 [Phytophthora parasitica] >gi|567976016|gb|ETL26545.1| hypothetical protein L916_19811 [Phytophthora parasitica] >gi|568005473|gb|ETL79769.1| hypothetical protein L917_19670 [Phytophthora parasitica] >gi|568035363|gb|ETM33008.1| hypothetical protein L914_19710 [Phytophthora parasitica] >gi|568101975|gb|ETN16657.1| hypothetical protein PPTG_05818 [Phytophthora parasitica INRA-310] >gi|570313553|gb|ETO61501.1| hypothetical protein F444_20503 [Phytophthora parasitica P1976] >gi|570937329|gb|ETP02586.1| hypothetical protein F441_20376 [Phytophthora parasitica CJ01A1] >gi|570967641|gb|ETP30760.1| hypothetical protein F442_20309 [Phytophthora parasitica P10297] >gi|970654589|gb|KUF92882.1| ATP-dependent DNA helicase Q 1 [Phytophthora nicotianae])

HSP 1 Score: 405.986 bits (1042), Expect = 8.758e-132
Identity = 206/425 (48.47%), Postives = 285/425 (67.06%), Query Frame = 0
Query:   68 ANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYK-EAVRCEAGCDNCQR 489
            AN+ VF N  FR +Q  +I+A ++  D FV+MPTGGGKSLCYQLPA++++GVT+VV+PL+SLIQDQV+ALI+     IPAA L S T  TL R I  +L        P++KLLY+TPE+++       L+K L+ + MLAR V+DEAHCVSQWGHDFRP++ +LG  +K FP++P+MALTATA  +V+  V K+L + N G    +       R NL FE+R K R  +    + L      T+      GIVYCMT+ D E +A++L D+G SAD YHAG S  +R  V  AW  GQ+ I+CATIA+GMGI+K +VR+V+H S+AKS+EGY+QE GRAGRDG P++C+LFY   DV K++ ++  P   +G  KK +A  +EKL++M ++CE+   CRR +L  +FG + +   C   CDNC+R
Sbjct:  115 ANRKVFGNDGFRKNQREVIEATMRGEDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTSLTLKRSITAELKR----SAPSVKLLYLTPEKVIKSPEMMDLLKDLHRNKMLARFVIDEAHCVSQWGHDFRPEYNQLGILKKTFPTVPLMALTATAPPKVIDHVKKSLMISN-GHVFSMSFN----RQNLTFEVRDKPRGGDKKAMEAL-YQHISTTYAPDAVGIVYCMTKQDCEDVANYLFDHGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCILFYSPRDVSKMRNILSMP--QKGMTKKTRAVHMEKLKSMAEYCEDDTTCRRQLLISYFGQQFQRSDCNRTCDNCRR 527          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|1173949577|gb|OQR97596.1| (bloom syndrome protein, DEAD/DEAH box helicase [Achlya hypogyna])

HSP 1 Score: 402.134 bits (1032), Expect = 2.075e-131
Identity = 206/444 (46.40%), Postives = 288/444 (64.86%), Query Frame = 0
Query:   64 QIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKE---------------NARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYK-EAVRCEAGCDNCQR 489
            QI  ANK +F N SFR +Q   I+A L+ +DVFV+MPTGGGKSLCYQLPA+++ G+T+VV+PL+SLIQDQV++L++     IPAA L+S T   L + ++RDL        P +KLLYVTPERL   +   Q++++L++ GMLAR VVDEAHCVS WGHDFRPD+++LG  +  FPS+P+MALTATA ++V+  V K L +    PRA +       R NL F +  K+ D +                A   + E ++ +        GIVYCMT+  +E +A++L D G  AD YHAG S ++R  V  AW  G+++++CATIA+GMGIDK +VR+V+H ++AK +EGY+QE GRAGRDG P++C +FY + DV K+K++I  P   +G   K +A  +EKL  M D+CE+   CRR  L  +FG       C+  CDNC+R
Sbjct:   13 QISRANKLIFGNDSFRKNQREAIEATLRGQDVFVLMPTGGGKSLCYQLPAVLSPGITIVVSPLLSLIQDQVTSLVRNQPVGIPAAFLSSQTLAALKKAVWRDLHR----PIPTLKLLYVTPERLAASDSLIQVLESLHQRGMLARFVVDEAHCVSSWGHDFRPDYHKLGNLKDLFPSVPLMALTATAPQKVIDSVKKVLKI----PRAQV-FSMSFNRTNLSFAVLEKDLDGKVDLNLMPRSNAVVEGKALASLYEYIKTKYDN--SVVGIVYCMTKQQSEDVANYLFDRGILADFYHAGQSSSDRELVQEAWQRGEIKVVCATIAYGMGIDKPDVRYVIHYAVAKCVEGYYQEAGRAGRDGKPSQCTIFYNRRDVTKIKSIINMP--KKGSNAKSRAVHMEKLEKMMDYCEDDTSCRRQALVAYFGQTFNRADCQRTCDNCKR 443          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|953490627|emb|CEG46281.1| (bloom syndrome protein [Plasmopara halstedii])

HSP 1 Score: 404.445 bits (1038), Expect = 4.117e-131
Identity = 215/477 (45.07%), Postives = 299/477 (62.68%), Query Frame = 0
Query:   22 QDRESSTSTGRYARRYDYMQEQDAANACLQPSPPRTRDERGAQIHFA------NKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYK-EAVRCEAGCDNCQR 489
            ++RE +T+       YD +Q+    +A   P+ P    +R  +I         N+ VF N  FR +Q  +I+A ++  D FV+MPTGGGKSLCYQLPA++++GVT+VV+PL+SLIQDQV+ALI+     IPAA L S T  TL R I  +L        P++KLLY+TPE+++       L++ L+ + MLAR V+DEAHCVSQWGHDFRP++ +LG  +  FP++P+MALTATA  +V+  V K+L +        L       R NL FE+R K R  +    + L  L  +T       GIVYCMT+ + E +AD+L D G  AD YHAG S  +R  V  AW  GQV I+CATIA+GMGIDK  VR+V+H S+AKS+EGY+QE GRAGRDG P++C+LFY   DV +++ ++  P   +G  KK +A  +EKLR+M ++CE    CRR +L  +FG + +   C   CDNC+R
Sbjct:   71 ENREPNTA-------YDLIQQSRRRSAA--PNEPSKAKKRAVEISSVDLLTKVNRIVFGNDDFRTNQREVIEATMRGEDCFVLMPTGGGKSLCYQLPAVISKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTSLTLKRSIIAELRRT----APSVKLLYLTPEKIIKSSEMMNLLQGLHRNQMLARFVIDEAHCVSQWGHDFRPEYNQLGLLKTSFPNVPLMALTATAPPKVINHVRKSLMISKG-----LVFSMSFNRQNLTFEVRDKPRGGDKKAMEALYELISKTYP-SDAVGIVYCMTRQNCEYVADYLFDRGLRADFYHAGQSATDRHLVQDAWQNGQVSIVCATIAYGMGIDKSNVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCILFYSPTDVSRMRHILSMP--QKGMTKKTRAVHIEKLRSMAEYCENDTTCRRQLLLSYFGQQFQRSECNRTCDNCRR 526          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|669143754|ref|XP_008607439.1| (bloom syndrome protein [Saprolegnia diclina VS20] >gi|530741136|gb|EQC39378.1| bloom syndrome protein [Saprolegnia diclina VS20])

HSP 1 Score: 398.667 bits (1023), Expect = 2.026e-130
Identity = 204/436 (46.79%), Postives = 288/436 (66.06%), Query Frame = 0
Query:   61 RGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVR-CEAGCDNCQRESAE 493
            R  QI  ANK +F N  FR +Q   I+A L+ +DVFV+MPTGGGKSLCYQLPA+++ G+T+VV+PL+SLIQDQV++L++     IPAA L+S T   L + I+RDL        P +KLLYVTPERL   +   Q++++L++  MLAR VVDEAHCVS WGHDFRPD+++LG  +  FP++P+MALTATA ++V+ +V K L +    PRA +       R NL + +  K      A + + + ++ +        GIVYCMT+  +E +A++L D G  AD YHAG S ++R  V  AW  G+++++CATIA+GMGIDK +VR+V+H ++AK +EGY+QE GRAGRDG P+RC +FY + DV K+K++I  P   +G   K +A  ++KL  M D+CE+R  CRR  L  +FG     + C   CDNC+R  A 
Sbjct:   10 RDDQIARANKAIFGNDGFRRNQRDAIEATLKGQDVFVLMPTGGGKSLCYQLPAVLSPGITIVVSPLLSLIQDQVTSLVRNQPVGIPAAFLSSQTLAKLKKAIWRDLHR----PIPTLKLLYVTPERLAASDSLIQVLESLHQRKMLARFVVDEAHCVSSWGHDFRPDYHKLGNIKDLFPTVPMMALTATAPQKVIDNVKKVLKI----PRATI-FSMSFNRTNLAYTLEGK------ALEALYKYIKTKYDN--SVVGIVYCMTKQQSEDVANYLFDRGILADFYHAGQSSSDRELVQDAWQRGEIKVVCATIAYGMGIDKPDVRYVIHYAVAKCVEGYYQEAGRAGRDGNPSRCTIFYSRRDVVKMKSIINMP--KKGNNAKSRAVHMDKLEKMMDYCEDRTSCRRQYLVGYFGQTFNRKDCNKTCDNCKRVIAH 426          
BLAST of EWM28190.1 vs. NCBI_GenBank
Match: gi|673039501|ref|XP_008873711.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574470492|gb|ETV97502.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 396.356 bits (1017), Expect = 2.589e-129
Identity = 209/442 (47.29%), Postives = 281/442 (63.57%), Query Frame = 0
Query:   55 PRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHR--IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGKKRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVR-CEAGCDNCQRESAE 493
            P  R     QI  AN+ +F N SFR +Q   I   L + DVFV+MPTGGGKSLCYQLPA+++ GVT+VV+PL+SLIQDQV++L++     IPAA L+S T   L + + RDL        P IKLLYVTPE+L        L++ LN  GMLAR VVDEAHCV+QWGHDFRPD+ +LG  ++ FP +P+MALTATA ++V+  V K L +    PRA +       R NL F++  KE ++  A   +   +  + +      GIVYCMT+  +E +A++L D G  AD YHAG S  +R  V  AW  GQV+++CATIA+GMGIDK +VR+V+H S+AKS+EGY+QE GRAGRDG  ++C +FY + DV K++ +I  P   +G   K +   +EKL  M ++CEER  CRR  L  +FG     + C   CDNC+R  A 
Sbjct:    7 PNGRPGADDQIARANRYIFGNSSFRTNQRNAILTTLNREDVFVLMPTGGGKSLCYQLPAVLSEGVTIVVSPLLSLIQDQVTSLVRNKPVGIPAAYLSSQTAVKLLKAVLRDLHR----PVPTIKLLYVTPEKLASSSSLISLLEDLNRRGMLARFVVDEAHCVTQWGHDFRPDYNKLGRLKELFPQVPVMALTATAPQKVIDSVKKILKI----PRATV-FTMSFNRTNLSFDVIDKENEEPKALAQLHSYIASKYAN--NVVGIVYCMTKQQSEDVANYLFDRGIQADFYHAGQSSTDREMVQEAWQDGQVKVVCATIAYGMGIDKADVRYVIHYSVAKSIEGYYQEAGRAGRDGQSSQCTIFYNRRDVSKIRGIINMP--KKGNTMKTRGVHMEKLERMMEYCEERASCRRQYLVSYFGQSFNRKDCNKTCDNCRRVIAH 435          
The following BLAST results are available for this feature:
BLAST of EWM28190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110535|gb|EWM28190.1|0.000e+0100.00dna helicase [Nannochloropsis gaditana][more]
gi|813102408|ref|XP_012193810.1|7.290e-13547.48hypothetical protein SPRG_00320 [Saprolegnia paras... [more]
gi|698823137|ref|XP_009844597.1|4.726e-13247.29hypothetical protein H257_17485 [Aphanomyces astac... [more]
gi|1173958453|gb|OQS04809.1|7.673e-13246.82bloom syndrome protein, DEAD/DEAH box helicase [Th... [more]
gi|970652233|gb|KUF90934.1|8.388e-13248.47ATP-dependent DNA helicase Q 1 [Phytophthora nicot... [more]
gi|675177819|ref|XP_008897794.1|8.758e-13248.47hypothetical protein PPTG_05818 [Phytophthora para... [more]
gi|1173949577|gb|OQR97596.1|2.075e-13146.40bloom syndrome protein, DEAD/DEAH box helicase [Ac... [more]
gi|953490627|emb|CEG46281.1|4.117e-13145.07bloom syndrome protein [Plasmopara halstedii][more]
gi|669143754|ref|XP_008607439.1|2.026e-13046.79bloom syndrome protein [Saprolegnia diclina VS20] ... [more]
gi|673039501|ref|XP_008873711.1|2.589e-12947.29hypothetical protein, variant [Aphanomyces invadan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2457rna2457Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications