EWM28302.1, cds2411 (CDS) Nannochloropsis gaditana

Overview
NameEWM28302.1
Unique Namecds2411
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:339684..339806 +
Alignment locationCM002459.1:340069..340651 +
Alignment locationCM002459.1:340883..342990 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28302.1
Productubiquitin-like protein
Orig transcript idgnl|cribi|Naga_100004g52.9233.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:339684..339806 +
CM002459.1supercontigCM002459.1:340069..340651 +
CM002459.1supercontigCM002459.1:340883..342990 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR016197Chromodomain-like
IPR019954Ubiquitin_CS
IPR000626Ubiquitin-like
IPR019956Ubiquitin
Homology
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|585110647|gb|EWM28302.1| (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1851.64 bits (4795), Expect = 0.000e+0
Identity = 937/937 (100.00%), Postives = 937/937 (100.00%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 937
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 937          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|585110648|gb|EWM28303.1| (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1691.01 bits (4378), Expect = 0.000e+0
Identity = 891/1014 (87.87%), Postives = 903/1014 (89.05%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK--DTVHQWLEAQVLS---------------------------------VDEERRTCRVTYLGW----------PRRWDETLSWSSPRIA----------------PFRTRTTHNLQAPFLSP----------------TPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 937
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK  D + + L   +L                                   D   R CR + + +          P   D    W   ++                 P R   T +  +P ++P                TPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 1014          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|553179793|ref|XP_005852763.1| (ubiquilin [Nannochloropsis gaditana CCMP526] >gi|422295772|gb|EKU23071.1| ubiquilin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 320
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 320          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|1173951491|gb|OQR99365.1| (ubiquitin family protein [Achlya hypogyna])

HSP 1 Score: 171.4 bits (433), Expect = 1.798e-41
Identity = 127/348 (36.49%), Postives = 165/348 (47.41%), Query Frame = 0
Query:   11 LSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGV---------PVSSSQPPVPRTGLA-----TGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNP----------------QSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTP-LAAPRLP------LPVRGRDDLRRVLPEV 321
            + I +KTL    F L V     V+ LK  +   TQ+PE RQRLIYRG++L+DG+ LS YN+E GHT+H VA+P  +         P+ +    V RT L      +  A     RR+ +         GGSL A  +  A S    +  PGG   + D  P                 SLEH+ QGLMT+ +LLS   APT  V                 R   L++              RR ++ GQ++DVKDTV+QWLE  VL V        + Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP +  PR P      L  + RD L  +LP V
Sbjct:    7 MEIRVKTLNDHSFALTVARTIGVTELKAMLLPATQVPEARQRLIYRGKLLKDGDLLSAYNIENGHTLHMVAKPDRIVAFEPDETEPLLAPTRNVTRTRLQPRRLDSAAAFASMRRRLGLDD-------GGSLLANTSPTATSQAPPSEPPGGTVSDRDPIPDVFAEPEPESIPPPTNDSLEHLTQGLMTIRTLLSTASAPTETVPAP-------------DRGAVLRS--------------RREFFVGQWLDVKDTVNQWLEGTVLEVSASH--VHIHYHGWPTRWDEWIEKPSPRLAAFRTRTLHTSASPFLSPTPAVRQPRAPTTTVRALVPQIRDSLHAMLPFV 318          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|813125134|ref|XP_012196614.1| (hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65] >gi|641539147|gb|KDO32968.1| hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 158.303 bits (399), Expect = 1.920e-38
Identity = 126/357 (35.29%), Postives = 168/357 (47.06%), Query Frame = 0
Query:    2 VTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQS----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLA--APRLPLPV------RGRDDLRRVLPEV 321
            +T  DS I   I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A     A   A +P  A    D+ P+            EH+ QGL+T+ +LLS   + T      A  G+   A                          RR +Y GQ++DVKDTV+QWLE  VL +        V Y GWP RWDE +   SPR+A FRTRT H   +PF SPTP+A  A   P P       + RD LR +LP V
Sbjct:   15 MTSQDSCI--EIRIKTLNDHSFALQVRPGIAVSELKAMLQTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPSRNVLRSQLRPRQSRLDSAAAFASMRRRLGL-------DEDGSLLSD-ALNFRHARSTASLPSDADTRLDLTPEPEPEARPPAVPFEHIEQGLLTIRTLLSTAASATPPATTGAERGATLRA--------------------------RRVFYVGQWLDVKDTVNQWLEGTVLELSATH--VLVHYHGWPTRWDEWVEKISPRLAAFRTRTLHPTGSPFQSPTPIARSARSTPPPTARSLMPQIRDALRDMLPYV 333          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|673041281|ref|XP_008874601.1| (hypothetical protein H310_10115 [Aphanomyces invadans] >gi|574469811|gb|ETV96824.1| hypothetical protein H310_10115 [Aphanomyces invadans])

HSP 1 Score: 159.844 bits (403), Expect = 3.122e-37
Identity = 140/472 (29.66%), Postives = 197/472 (41.74%), Query Frame = 0
Query:    4 PSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAAS--------AGVLAPVPGGAHREAD---------------------------VNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNL-QAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHV 439
            P  S++ + I IKTL    F L V    S+  LK  ++  T +P +RQRLIYRG++L+DG+ LS YNVE GHT+H VARP      + QP  P    ++  AP       L     +   R   L A  A++ A+        +G    +P  +    D                             P S+EH+RQGL+T+ S+LS    P A     AGE S  +                            R+++ GQ++DVKDTV+QWLE  +L V+E++    V Y GWP RWDE +   SPR+A FRTRT H    +  LSP P+ A   P     +  +R +LP++  +L  +    +P V  +     A  LD       E   +++               + Q+R                                 L    APL DR GRLLAD AP V
Sbjct:   41 PVSSTLHMEIRIKTLNDHTFSLTVARSVSIRDLKTTLQTTTAVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHTVHMVARPD----RAQQPTSPTPLSSSRLAP-------LHDTAEMLQSRLARLDASTASSLATMRRRLGVDSGFATSLPAASRMHHDRLDFLRSRYGPSDSTPSNEPESEASTIAPPPSVEHIRQGLLTIQSMLSLPATPVA-----AGEPSPPS----------------------------RQFFVGQWLDVKDTVNQWLEGTILEVNEDQ--VFVHYHGWPSRWDEWIDRKSPRLAAFRTRTLHGAGTSRHLSPAPMLASHQPAAGSTQTTIRTLLPQLQSVLHEM----LPFVNEL-----ASALDANVPSATEATDSDDDMPDDSS--------SPQVRN--------------------------------LVATVAPLFDRVGRLLADAAPAV 417          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|669148260|ref|XP_008609692.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530738670|gb|EQC36912.1| hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 155.992 bits (393), Expect = 4.375e-37
Identity = 127/352 (36.08%), Postives = 170/352 (48.30%), Query Frame = 0
Query:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVN--PQS-----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPL--AAPRLPLPV------RGRDDLRRVLPEV 321
             + I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A         APVP  A R  D+   P+S            EH+ QGL+T+ +LLS + + T     SA  G+   A                          RR +Y GQ++DVKDTV+QWLE  VL +       RV Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP+  +A   P P       + RD LR +LP V
Sbjct:   21 CIEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLD-------EDGSLLSD-ALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDPFEHIEQGLLTLRTLLSTVTSATPTETTSAERGATLRA--------------------------RRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|669148262|ref|XP_008609693.1| (hypothetical protein SDRG_05739 [Saprolegnia diclina VS20] >gi|530738669|gb|EQC36911.1| hypothetical protein SDRG_05739 [Saprolegnia diclina VS20])

HSP 1 Score: 155.221 bits (391), Expect = 4.952e-36
Identity = 127/351 (36.18%), Postives = 170/351 (48.43%), Query Frame = 0
Query:   11 LSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVN--PQS-----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPL--AAPRLPLPV------RGRDDLRRVLPEV 321
            + I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A         APVP  A R  D+   P+S            EH+ QGL+T+ +LLS + + T     SA  G+   A                          RR +Y GQ++DVKDTV+QWLE  VL +       RV Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP+  +A   P P       + RD LR +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLD-------EDGSLLSD-ALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDPFEHIEQGLLTLRTLLSTVTSATPTETTSAERGATLRA--------------------------RRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|970657952|gb|KUF95775.1| (Ubiquilin [Phytophthora nicotianae] >gi|970661868|gb|KUF99299.1| Ubiquilin [Phytophthora nicotianae])

HSP 1 Score: 155.992 bits (393), Expect = 2.194e-35
Identity = 141/474 (29.75%), Postives = 213/474 (44.94%), Query Frame = 0
Query:    2 VTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARP------------------------AGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERR---RWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLP-LPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEE---QKEGEEEKNEEGSGGVEGG--GNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATL 442
             TP++ S+ L +  KTL    F ++     SV+  + +V   T +P  RQRLIYRG++L+DG  L+ Y+++ GHT+H VA+P                        +   +++ +  + RTG  T T P    R IL              A GM       G+  P P    +E   +   LE + QG++TM+++LS           +A E   Q        A+  Q  E       G A  RR   +++ GQ++DVKDTV+QWLE+ V+++ + +    + Y GWP RWDE +   S RIA FRTRT H      +SP P    R+P  P  G +D+RR++ +V  ++R +    +P ++ +       GL EE+   ++E  E  NE  SG +  G  G   P   EQ +                         A   +   +A   APL DRFGRLL D A +   L
Sbjct:   38 FTPANDSLHLRL--KTLDERVFDVEAALSMSVADFRTKVALATSVPAPRQRLIYRGKLLKDGVALAAYDLQDGHTVHLVAKPPANTATSSTTQTTNEATRPREVNGSAWNLANLRSALRRTGATTTTQPLPMLREIL----DEMAESPQETAEGMGLG----GLSGPRP----QEQATSAVDLEPITQGILTMWTVLST----------AAQEQDEQEDERVEEDAQVDQPTE-------GQATTRRGPRQFFVGQWLDVKDTVNQWLESTVMAIADGK--VLIHYHGWPTRWDEWIDVDSDRIAAFRTRTLHTQNTQRMSPIPTT--RVPSAPRVGDNDVRRMVVDVHNLMREM----MPHIDRLA------GLCEEDLRREQERGEAHNEVESGNITAGHSGPDEPTTLEQGQ-------------------------AHESEVSEVAHMVAPLFDRFGRLLMDSARYFDPL 441          
BLAST of EWM28302.1 vs. NCBI_GenBank
Match: gi|567964946|gb|ETK90423.1| (hypothetical protein L915_05814 [Phytophthora parasitica] >gi|567993664|gb|ETL43839.1| hypothetical protein L916_05746 [Phytophthora parasitica] >gi|570955062|gb|ETP20318.1| hypothetical protein F441_05939 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 154.066 bits (388), Expect = 7.879e-35
Identity = 141/474 (29.75%), Postives = 212/474 (44.73%), Query Frame = 0
Query:    2 VTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARP------------------------AGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERR---RWYPGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLP-LPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEE---QKEGEEEKNEEGSGGVEGG--GNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATL 442
             TP++ S+ L +  KTL    F ++     SV+  + +V   T +P  RQRLIYRG++L+DG  L+ Y+++ GHT+H VA+P                        +   +++ +  + RTG  T T P    R IL              A GM       G+  P P    +E   +   LE + QG++TM ++LS           +A E   Q        A+  Q  E       G A  RR   +++ GQ++DVKDTV+QWLE+ V+++ + +    + Y GWP RWDE +   S RIA FRTRT H      +SP P    R+P  P  G +D+RR++ +V  ++R +    +P ++ +       GL EE+   ++E  E  NE  SG +  G  G   P   EQ +                         A   +   +A   APL DRFGRLL D A +   L
Sbjct:   38 FTPANDSLHLRL--KTLDERVFDVEAALSMSVADFRTKVALATSVPAPRQRLIYRGKLLKDGVALAAYDLQDGHTVHLVAKPPANTATSSTTQTTNEATRPREVNGSAWNLANLRSALRRTGATTTTQPLPMLREIL----DEMAESPQETAEGMGLG----GLSGPRP----QEQATSAVDLEPITQGILTMRTVLST----------AAQEQDEQEDERVEEDAQVDQPTE-------GQATTRRGPRQFFVGQWLDVKDTVNQWLESTVMAIADGK--VLIHYHGWPTRWDEWIDVDSDRIAAFRTRTLHTQNTQRMSPIPTT--RVPSAPRVGDNDVRRMVVDVHNLMREM----MPHIDRLA------GLCEEDLRREQERGEAHNEVESGNITAGHSGPDEPTTLEQGQ-------------------------AHESEVSEVAHMVAPLFDRFGRLLMDSARYFDPL 441          
The following BLAST results are available for this feature:
BLAST of EWM28302.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110647|gb|EWM28302.1|0.000e+0100.00ubiquitin-like protein [Nannochloropsis gaditana][more]
gi|585110648|gb|EWM28303.1|0.000e+087.87ubiquitin-like protein [Nannochloropsis gaditana][more]
gi|553179793|ref|XP_005852763.1|0.000e+0100.00ubiquilin [Nannochloropsis gaditana CCMP526] >gi|4... [more]
gi|1173951491|gb|OQR99365.1|1.798e-4136.49ubiquitin family protein [Achlya hypogyna][more]
gi|813125134|ref|XP_012196614.1|1.920e-3835.29hypothetical protein SPRG_02660 [Saprolegnia paras... [more]
gi|673041281|ref|XP_008874601.1|3.122e-3729.66hypothetical protein H310_10115 [Aphanomyces invad... [more]
gi|669148260|ref|XP_008609692.1|4.375e-3736.08hypothetical protein, variant [Saprolegnia diclina... [more]
gi|669148262|ref|XP_008609693.1|4.952e-3636.18hypothetical protein SDRG_05739 [Saprolegnia dicli... [more]
gi|970657952|gb|KUF95775.1|2.194e-3529.75Ubiquilin [Phytophthora nicotianae] >gi|970661868|... [more]
gi|567964946|gb|ETK90423.1|7.879e-3529.75hypothetical protein L915_05814 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2419rna2419Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications