EWM28303.1, cds2410 (CDS) Nannochloropsis gaditana

Overview
NameEWM28303.1
Unique Namecds2410
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:339684..339806 +
Alignment locationCM002459.1:340069..342990 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28303.1
Productubiquitin-like protein
Orig transcript idgnl|cribi|Naga_100004g52.9234.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:339684..339806 +
CM002459.1supercontigCM002459.1:340069..342990 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromodomain-like
IPR029071Ubiquitin-rel_dom
IPR019954Ubiquitin_CS
IPR000626Ubiquitin-like
IPR019956Ubiquitin
Homology
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|585110648|gb|EWM28303.1| (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 2010.73 bits (5208), Expect = 0.000e+0
Identity = 1014/1014 (100.00%), Postives = 1014/1014 (100.00%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 1014
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 1014          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|585110647|gb|EWM28302.1| (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1691.01 bits (4378), Expect = 0.000e+0
Identity = 891/1014 (87.87%), Postives = 903/1014 (89.05%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 1014
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK  D + + L   +L                                   D   R CR + + +          P   D    W   ++                 P R   T +  +P ++P                TPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK--DTVHQWLEAQVLS---------------------------------VDEERRTCRVTYLGW----------PRRWDETLSWSSPRIA----------------PFRTRTTHNLQAPFLSP----------------TPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG 937          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|553179793|ref|XP_005852763.1| (ubiquilin [Nannochloropsis gaditana CCMP526] >gi|422295772|gb|EKU23071.1| ubiquilin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 473.396 bits (1217), Expect = 3.347e-156
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK 235
            MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK
Sbjct:    1 MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVK 235          

HSP 2 Score: 188.348 bits (477), Expect = 1.689e-49
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 397
            DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE
Sbjct:  236 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 320          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|1173951491|gb|OQR99365.1| (ubiquitin family protein [Achlya hypogyna])

HSP 1 Score: 102.834 bits (255), Expect = 6.750e-19
Identity = 87/270 (32.22%), Postives = 122/270 (45.19%), Query Frame = 0
Query:   11 LSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGV---------PVSSSQPPVPRTGLA-----TGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNP----------------QSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE 250
            + I +KTL    F L V     V+ LK  +   TQ+PE RQRLIYRG++L+DG+ LS YN+E GHT+H VA+P  +         P+ +    V RT L      +  A     RR+ +         GGSL A  +  A S    +  PGG   + D  P                 SLEH+ QGLMT+ +LLS   APT  V                 R   L++              RR ++ GQ++DVK  D +++ L G++LE
Sbjct:    7 MEIRVKTLNDHSFALTVARTIGVTELKAMLLPATQVPEARQRLIYRGKLLKDGDLLSAYNIENGHTLHMVAKPDRIVAFEPDETEPLLAPTRNVTRTRLQPRRLDSAAAFASMRRRLGLDD-------GGSLLANTSPTATSQAPPSEPPGGTVSDRDPIPDVFAEPEPESIPPPTNDSLEHLTQGLMTIRTLLSTASAPTETVPAP-------------DRGAVLRS--------------RREFFVGQWLDVK--DTVNQWLEGTVLE 240          

HSP 2 Score: 77.411 bits (189), Expect = 6.777e-11
Identity = 45/93 (48.39%), Postives = 53/93 (56.99%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTP-LAAPRLP------LPVRGRDDLRRVLPEV 398
            DTV+QWLE  VL V        + Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP +  PR P      L  + RD L  +LP V
Sbjct:  228 DTVNQWLEGTVLEVSASH--VHIHYHGWPTRWDEWIEKPSPRLAAFRTRTLHTSASPFLSPTPAVRQPRAPTTTVRALVPQIRDSLHAMLPFV 318          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|813125134|ref|XP_012196614.1| (hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65] >gi|641539147|gb|KDO32968.1| hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 94.3597 bits (233), Expect = 9.783e-17
Identity = 86/278 (30.94%), Postives = 125/278 (44.96%), Query Frame = 0
Query:    2 VTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVNPQS----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE 250
            +T  DS I   I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A     A   A +P  A    D+ P+            EH+ QGL+T+ +LLS   + T      A  G+   A                          RR +Y GQ++DVK  D +++ L G++LE
Sbjct:   15 MTSQDSCI--EIRIKTLNDHSFALQVRPGIAVSELKAMLQTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPSRNVLRSQLRPRQSRLDSAAAFASMRRRLGL-------DEDGSLLSD-ALNFRHARSTASLPSDADTRLDLTPEPEPEARPPAVPFEHIEQGLLTIRTLLSTAASATPPATTGAERGATLRA--------------------------RRVFYVGQWLDVK--DTVNQWLEGTVLE 254          

HSP 2 Score: 73.1738 bits (178), Expect = 7.108e-10
Identity = 45/94 (47.87%), Postives = 53/94 (56.38%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLA--APRLPLPV------RGRDDLRRVLPEV 398
            DTV+QWLE  VL +        V Y GWP RWDE +   SPR+A FRTRT H   +PF SPTP+A  A   P P       + RD LR +LP V
Sbjct:  242 DTVNQWLEGTVLELSATH--VLVHYHGWPTRWDEWVEKISPRLAAFRTRTLHPTGSPFQSPTPIARSARSTPPPTARSLMPQIRDALRDMLPYV 333          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|673041281|ref|XP_008874601.1| (hypothetical protein H310_10115 [Aphanomyces invadans] >gi|574469811|gb|ETV96824.1| hypothetical protein H310_10115 [Aphanomyces invadans])

HSP 1 Score: 95.9005 bits (237), Expect = 1.161e-16
Identity = 89/274 (32.48%), Postives = 124/274 (45.26%), Query Frame = 0
Query:    4 PSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARP-------AGVPVSSSQ-PPVPRTG---------LATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVL----APVPGGAHREAD------VNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE 250
            P  S++ + I IKTL    F L V    S+  LK  ++  T +P +RQRLIYRG++L+DG+ LS YNVE GHT+H VARP       +  P+SSS+  P+  T          L   TA   A  R  +G   V  G   SL A           L     P       E +        P S+EH+RQGL+T+ S+LS    P A     AGE S  +                            R+++ GQ++DVK  D +++ L G++LE
Sbjct:   41 PVSSTLHMEIRIKTLNDHTFSLTVARSVSIRDLKTTLQTTTAVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHTVHMVARPDRAQQPTSPTPLSSSRLAPLHDTAEMLQSRLARLDASTASSLATMRRRLG---VDSGFATSLPAASRMHHDRLDFLRSRYGPSDSTPSNEPESEASTIAPPPSVEHIRQGLLTIQSMLSLPATPVA-----AGEPSPPS----------------------------RQFFVGQWLDVK--DTVNQWLEGTILE 276          

HSP 2 Score: 72.7886 bits (177), Expect = 2.172e-9
Identity = 62/205 (30.24%), Postives = 85/205 (41.46%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNL-QAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHV 516
            DTV+QWLE  +L V+E++    V Y GWP RWDE +   SPR+A FRTRT H    +  LSP P+ A   P     +  +R +LP++  +L  +    +P V  +     A  LD       E   +++               + Q+R                                 L    APL DR GRLLAD AP V
Sbjct:  264 DTVNQWLEGTILEVNEDQ--VFVHYHGWPSRWDEWIDRKSPRLAAFRTRTLHGAGTSRHLSPAPMLASHQPAAGSTQTTIRTLLPQLQSVLHEM----LPFVNEL-----ASALDANVPSATEATDSDDDMPDDSS--------SPQVRN--------------------------------LVATVAPLFDRVGRLLADAAPAV 417          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|678338983|emb|CDW74693.1| (UNKNOWN [Stylonychia lemnae])

HSP 1 Score: 96.6709 bits (239), Expect = 1.321e-16
Identity = 67/217 (30.88%), Postives = 106/217 (48.85%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAP---RLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEA--VAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSR-----GNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATL 519
            DT+ QWLEAQ+L + + +    V Y GW  RWDE + +SSPR+A FR  T  N +  +LSP+P   P       P    ++L  +L E++  +       V   E  +  A  V+   D+      EEEK ++    ++   +L  +  E+ +++ L  SR     GN  + +  Q      A +  Q +  A   AP++DR GR+L DLAPH+  +
Sbjct:  192 DTIDQWLEAQILEIRDNK--VFVHYNGWGTRWDEWIEFSSPRLAAFRQYTVQNPRCNYLSPSPNIQPDALNFQSPSATNNELGGMLNEMVAFMSETSKMIVNFNEQRDNLANQVSTPRDQMVSMRNEEEKKQQ----IDEFSSLMEFDEERKQQQNLGNSRIHINAGNTSNNRYAQ------ADQNPQIIHNAAQLAPVMDRLGRMLTDLAPHLNNI 396          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|403376132|gb|EJY88046.1| (Ubiquitin family, putative (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 90.5077 bits (223), Expect = 9.646e-15
Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAP---RLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRR-QAVVLARDTAPLLDRFGRLLADLAPHVATL 519
            DT+ QWLE Q++ + E +    + Y GW  RWDE ++ +SPRIA FRT+T  N ++ +LSP P   P       P   +++L  +L +++ M++  +   +   + + E+A ++      Q    +   EE    +E   ++  +  EQ ++        N   R    Q  R R A +  Q V +A    P++DR GR+L D++PH   +
Sbjct:  434 DTIDQWLEGQIIDIKENQ--VFIHYNGWGSRWDEWVAANSPRIAAFRTQTVQNPRSFYLSPYPNILPDAANFTSP-SNQNELGSLLGDMMGMMQETQT-MIQDFKQLREQAASQST--SSQDSARQNIEEEKKQSIEEFSSILEYNEEQKQQ------HNNPNGRFHFNQNNRYRNADQNIQVVQMAAQLGPIVDRLGRMLTDISPHFNNI 632          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|669148260|ref|XP_008609692.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530738670|gb|EQC36912.1| hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 87.4261 bits (215), Expect = 2.494e-14
Identity = 86/272 (31.62%), Postives = 125/272 (45.96%), Query Frame = 0
Query:   11 LSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVN--PQS-----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE 250
            + I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A         APVP  A R  D+   P+S            EH+ QGL+T+ +LLS + + T     SA  G+   A                          RR +Y GQ++DVK  D +++ L G++LE
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLD-------EDGSLLSD-ALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDPFEHIEQGLLTLRTLLSTVTSATPTETTSAERGATLRA--------------------------RRLFYVGQWLDVK--DTVNQWLEGTVLE 257          

HSP 2 Score: 77.7962 bits (190), Expect = 3.844e-11
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPL--AAPRLPLPV------RGRDDLRRVLPEV 398
            DTV+QWLE  VL +       RV Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP+  +A   P P       + RD LR +LP V
Sbjct:  245 DTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336          
BLAST of EWM28303.1 vs. NCBI_GenBank
Match: gi|669148262|ref|XP_008609693.1| (hypothetical protein SDRG_05739 [Saprolegnia diclina VS20] >gi|530738669|gb|EQC36911.1| hypothetical protein SDRG_05739 [Saprolegnia diclina VS20])

HSP 1 Score: 88.1965 bits (217), Expect = 2.763e-14
Identity = 86/272 (31.62%), Postives = 125/272 (45.96%), Query Frame = 0
Query:   11 LSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPA------GVPVSSSQPPVP-------------RTGLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAHREADVN--PQS-----------LEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE 250
            + I IKTL    F LQV    +VS LK  ++  TQ+PE RQRLIYRG++++D + L+ YNVE GHT+H VA+P       G   S ++P +P             ++ L +  A     RR+ +          GSL +  A         APVP  A R  D+   P+S            EH+ QGL+T+ +LLS + + T     SA  G+   A                          RR +Y GQ++DVK  D +++ L G++LE
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLD-------EDGSLLSD-ALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDPFEHIEQGLLTLRTLLSTVTSATPTETTSAERGATLRA--------------------------RRLFYVGQWLDVK--DTVNQWLEGTVLE 257          

HSP 2 Score: 76.2554 bits (186), Expect = 1.429e-10
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 0
Query:  313 DTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPL--AAPRLPLPV------RGRDDLRRVLPEV 398
            DTV+QWLE  VL +       RV Y GWP RWDE +   SPR+A FRTRT H   +PFLSPTP+  +A   P P       + RD LR +LP V
Sbjct:  245 DTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336          
The following BLAST results are available for this feature:
BLAST of EWM28303.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110648|gb|EWM28303.1|0.000e+0100.00ubiquitin-like protein [Nannochloropsis gaditana][more]
gi|585110647|gb|EWM28302.1|0.000e+087.87ubiquitin-like protein [Nannochloropsis gaditana][more]
gi|553179793|ref|XP_005852763.1|3.347e-156100.00ubiquilin [Nannochloropsis gaditana CCMP526] >gi|4... [more]
gi|1173951491|gb|OQR99365.1|6.750e-1932.22ubiquitin family protein [Achlya hypogyna][more]
gi|813125134|ref|XP_012196614.1|9.783e-1730.94hypothetical protein SPRG_02660 [Saprolegnia paras... [more]
gi|673041281|ref|XP_008874601.1|1.161e-1632.48hypothetical protein H310_10115 [Aphanomyces invad... [more]
gi|678338983|emb|CDW74693.1|1.321e-1630.88UNKNOWN [Stylonychia lemnae][more]
gi|403376132|gb|EJY88046.1|9.646e-1528.44Ubiquitin family, putative (macronuclear) [Oxytric... [more]
gi|669148260|ref|XP_008609692.1|2.494e-1431.62hypothetical protein, variant [Saprolegnia diclina... [more]
gi|669148262|ref|XP_008609693.1|2.763e-1431.62hypothetical protein SDRG_05739 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2418rna2418Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications