EWM28252.1, cds2398 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|585110597|gb|EWM28252.1| (lipin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1203.35 bits (3112), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0
Query: 1 MNVARDVVLAHGEDGILHSTAFVVSFKPVNSLYKWLVGRPVLESLHARRGRSSGETATNEEGIETREDSRGVGATGATHAQGMPSSSAGELDGDLDRRGPANTLASSILSSIGLTALPHPPTAAIERGGVARAAHETSSLAHGEAQSRVSGQNKSFKQLKMPSSGLDPRAPAPDRPQEKEAPLDGGFHKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVSVRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEVRMFASYKESSSFSSSPSSYPSREGIAANRTCEGSKQDPQSGTESAAYRHVDRGSSQEEHRENSDSDGGSTSSMQSIRMDRNVSEGKGDEGSHHGATFASYSDARLLRLLEQRLADVEGEQSRNDVNCKATDDESSKEKK 586
MNVARDVVLAHGEDGILHSTAFVVSFKPVNSLYKWLVGRPVLESLHARRGRSSGETATNEEGIETREDSRGVGATGATHAQGMPSSSAGELDGDLDRRGPANTLASSILSSIGLTALPHPPTAAIERGGVARAAHETSSLAHGEAQSRVSGQNKSFKQLKMPSSGLDPRAPAPDRPQEKEAPLDGGFHKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVSVRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEVRMFASYKESSSFSSSPSSYPSREGIAANRTCEGSKQDPQSGTESAAYRHVDRGSSQEEHRENSDSDGGSTSSMQSIRMDRNVSEGKGDEGSHHGATFASYSDARLLRLLEQRLADVEGEQSRNDVNCKATDDESSKEKK
Sbjct: 1 MNVARDVVLAHGEDGILHSTAFVVSFKPVNSLYKWLVGRPVLESLHARRGRSSGETATNEEGIETREDSRGVGATGATHAQGMPSSSAGELDGDLDRRGPANTLASSILSSIGLTALPHPPTAAIERGGVARAAHETSSLAHGEAQSRVSGQNKSFKQLKMPSSGLDPRAPAPDRPQEKEAPLDGGFHKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVSVRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEVRMFASYKESSSFSSSPSSYPSREGIAANRTCEGSKQDPQSGTESAAYRHVDRGSSQEEHRENSDSDGGSTSSMQSIRMDRNVSEGKGDEGSHHGATFASYSDARLLRLLEQRLADVEGEQSRNDVNCKATDDESSKEKK 586
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|675201357|ref|XP_008909563.1| (hypothetical protein PPTG_14772 [Phytophthora parasitica INRA-310] >gi|566017683|gb|ETI40594.1| hypothetical protein F443_14071 [Phytophthora parasitica P1569] >gi|567955059|gb|ETK80692.1| hypothetical protein L915_13714 [Phytophthora parasitica] >gi|567983727|gb|ETL34114.1| hypothetical protein L916_13613 [Phytophthora parasitica] >gi|568013200|gb|ETL87377.1| hypothetical protein L917_13420 [Phytophthora parasitica] >gi|568043305|gb|ETM40600.1| hypothetical protein L914_13507 [Phytophthora parasitica] >gi|568090258|gb|ETN05093.1| hypothetical protein PPTG_14772 [Phytophthora parasitica INRA-310] >gi|570321328|gb|ETO69276.1| hypothetical protein F444_14102 [Phytophthora parasitica P1976] >gi|570945093|gb|ETP10350.1| hypothetical protein F441_13998 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 154.836 bits (390), Expect = 6.636e-37 Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G +P +M + ++G C F G P + LT R PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N Q+ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S + R++ SY + ++
Sbjct: 213 YATGVGDMVRILVNGREMPT-KMELFERGRCTFITGGLIIPPEDLCFADLTEDR--------------PNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSDPNAL 475
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|970659830|gb|KUF97438.1| (hypothetical protein AM588_10011568 [Phytophthora nicotianae]) HSP 1 Score: 151.754 bits (382), Expect = 7.736e-37 Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G +P +M + ++G C F G P + LT R PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N Q+ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S + R++ SY + ++
Sbjct: 70 YATGVGDMVMILVNGREMPT-KMELFERGRCTFITGGLIIPPEDLCFADLTEDR--------------PNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSDPNAL 332
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|570976758|gb|ETP38512.1| (hypothetical protein F442_13915 [Phytophthora parasitica P10297]) HSP 1 Score: 154.451 bits (389), Expect = 7.776e-37 Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G +P +M + ++G C F G P + LT R PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N Q+ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S + R++ SY + ++
Sbjct: 214 YATGVGDMVRILVNGREMPT-KMELFERGRCTFITGGLIIPPEDLCFADLTEDR--------------PNLVRFEHYQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVSDPRLYESYSDPNAL 476
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|1214710617|gb|OWZ21690.1| (Lipin [Phytophthora megakarya]) HSP 1 Score: 153.68 bits (387), Expect = 9.275e-37 Identity = 94/280 (33.57%), Postives = 145/280 (51.79%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G+ +P +M + ++G C F G P L + L+ + PN V F + Y + V HLWG + VV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH LR VYLT+RP+ A+R +L N +++ +LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S V R++ SY + ++
Sbjct: 180 YATGVGDMVRILVNGKEMPT-KMELQERGRCTFITGGIMIPPEDLLFADLS--------------EEYPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESAVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-LRIVYLTARPLDWASASRTHLENA-EQQSIKLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYEEVGIDPSLIFMLDPYSNVKAVSDPRLYESYSDPNAL 442
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|953503470|emb|CEG35480.1| (Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Plasmopara halstedii]) HSP 1 Score: 152.91 bits (385), Expect = 2.327e-36 Identity = 94/277 (33.94%), Postives = 142/277 (51.26%), Query Frame = 0
Query: 191 GRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
G + V + V G +P +M + ++G C F G P + LT R PN V F + Y + V HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N +++ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AY+ G+DP IF+++P S V R++ SY + ++
Sbjct: 207 GVGDMVRILVNGRELPT-KMELQERGRCTFVTGGLVIPPEDLCFADLTENR--------------PNLVRFEHYQKYTNTVRYVDTKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENA-EQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYQEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSDPNAL 466
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|301117556|ref|XP_002906506.1| (lipin-like protein [Phytophthora infestans T30-4] >gi|262107855|gb|EEY65907.1| lipin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 151.754 bits (382), Expect = 2.863e-36 Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G +P +M + ++G C F G P + LT + PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N Q+ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S V R++ SY + ++
Sbjct: 139 YATGVGDMVRILVNGREMPT-KMELHERGRCTFITGGLIIPPDDLCFADLT--------------EDHPNLVRFEHFQKYTNTVRFVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSDPNAL 401
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|301117566|ref|XP_002906511.1| (lipin-like protein [Phytophthora infestans T30-4] >gi|262107860|gb|EEY65912.1| lipin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 152.14 bits (383), Expect = 3.683e-36 Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V G +P +M + ++G C F G P + LT + PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ LH +R VYLT+RP+ A+R +L N Q+ LP G + T+ LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S V R++ SY + ++
Sbjct: 188 YATGVGDMVRILVNGREMPT-KMELHERGRCTFITGGLIIPPDDLCFADLT--------------EDHPNLVRFEHFQKYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEEVGMDPSLIFMLDPYSNVKAVSDPRLYESYSDPNAL 450
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|695375508|ref|XP_009515560.1| (hypothetical protein PHYSODRAFT_469584 [Phytophthora sojae] >gi|348688471|gb|EGZ28285.1| hypothetical protein PHYSODRAFT_469584 [Phytophthora sojae]) HSP 1 Score: 149.828 bits (377), Expect = 3.227e-35 Identity = 93/280 (33.21%), Postives = 144/280 (51.43%), Query Frame = 0
Query: 188 HKDGRREGVEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVS--VRATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEV------RMFASYKESSSF 459
+ G + V + V + +P +M + ++G C F G P G+ L + PN V F + Y + V A HLWG + VVV D+DGT+T SD+ G+I ++ LG +++ H G F+ +H +R VYLT+RP+ A+R +L N Q+ LP G + T+ + LT L+ E+V KT K QVLN+++ T AGR VF+ GFGN+ D AYE G+DP IF+++P S + R++ SY + ++
Sbjct: 195 YATGVGDMVRILVNDKELPT-KMELQERGRCTFITGGVIIP--------------PGDLLFADLSEEQPNHVRFEHYQRYTNTVRYVDAKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKVHELG-MRIVYLTARPLDWASASRTHLENAVQQ-SIPLPPGVLITNSNGLTGALFTEVVNKTPHIFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEEVGMDPSLIFMLDPYSNLKAVSDPRLYESYSDPNAL 457
BLAST of EWM28252.1 vs. NCBI_GenBank
Match: gi|1173931301|gb|OQR83765.1| (lipin-like protein [Achlya hypogyna]) HSP 1 Score: 148.288 bits (373), Expect = 4.979e-35 Identity = 96/268 (35.82%), Postives = 138/268 (51.49%), Query Frame = 0
Query: 196 VEVYVRGELVPGLEMVVDDQGACVFAETGTTHPSRAALQSLLTLRRRKGEREVEGLLKPGPNPVDFVYCNPYGDVSVR---ATFHLWGSRDRVVVSDIDGTITKSDIRGYIDSVHLGNHEYTHQGIGRLFSHLHHAHHLRFVYLTSRPISLLEATRKYLANVYQEEGFRLPHGPVFTSMDSLTRVLYRELVEKTIRYMKAQVLNDIRSTFQKAGRPEGDQVFLFGFGNKSADGQAYEMAGVDPQSIFIINPSSEVRMFASYKESSSFS 460
++V+V G +P + MV++D+G C F T P +L + + L V F + Y SVR + ++W D VVV+D+DGTIT SDI G+I ++ LG +++ H G F L HA LR +YLT+RPI +A+R++L Q +RLP GP+ T+ LT L E+V K K VLN I+ GR VF+ GFGN+ D AYE GVD IF+I+P+S ++ K S+S
Sbjct: 127 IDVFVNGHQLP-IPMVLNDKGRCTFPSGQDTPP-----DDVLCFLNELIPLDSKALFA----SVRFEHRKRYS-TSVRFVESRLYVWAPDDAVVVADLDGTITISDIEGHIRTLRLGQYDFIHAGACGFFWKL-HAIGLRILYLTARPIHWADASREHLDQAAQAP-YRLPPGPLITNSSGLTGALLTEVVNKNPNVFKQNVLNAIQLASIHGGRRSPHPVFVAGFGNRPTDVMAYEAVGVDAACIFLIDPTSSLKAVRGAKVFESYS 381 The following BLAST results are available for this feature:
BLAST of EWM28252.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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