EWM28235.1, cds2389 (CDS) Nannochloropsis gaditana

Overview
NameEWM28235.1
Unique Namecds2389
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:287254..287310 +
Alignment locationCM002459.1:287744..290272 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28235.1
ProductCyclin
Orig transcript idgnl|cribi|Naga_100004g29.9166.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:287254..287310 +
CM002459.1supercontigCM002459.1:287744..290272 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR013763Cyclin-like
Homology
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|585110580|gb|EWM28235.1| (Cyclin [Nannochloropsis gaditana])

HSP 1 Score: 1724.14 bits (4464), Expect = 0.000e+0
Identity = 861/861 (100.00%), Postives = 861/861 (100.00%), Query Frame = 0
Query:    1 MGTESHSKHTTGRRGHDCQPTESLMGATHSSASSSSFTAFASGLPSSSSSGPKGPRLRTPSTNHPAPDLQPSPSKSDTPAHPDRLHGRKMTIDAILLQQAQHREASRGNGKCAPTILPSSAPHQLQYLQRRQPRPPLEGHAEETDEGNEMVDGSEAEMDEGRSEDAEESLTSGTDVGGGEGGVRRAERSSSHAGHPSGFLSLQQCDLNIVNGELGSERSGVGPVPSSSSLPASLPASASTTSAPISSFLHRIPAAFSGTSKGQEPLSSSAALMQGSGVAYGACWERGSGPREEGREGPRPGSLAASRAAAGVLGEGEHGRYWKDQSSGDMLRVETSRQDPTSLAPKTGASEGRFHHPHGQPPLHYQQQQPQKQPEGRASAPSTAYGIPRLGKTLLQLLKGGISRASSASTASTSSTTPTSSSLSSSSSSSFSSAPFSSTLSPPANPPPAAAATPPSSSVAGPALPLLGATTAEIDRLTGHRSLEVYAQMRLDERRNRPYYGLSSLPPSCPLSFSPSPDAPLPAAAVQLASHTPFPSSSSPVLEAQAFLQNGHRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYPQYLLGPAGAVRGLPDATSSAHYASVWRTGNGGHDAGGEGAVLLPDPPPFDFHSLPRRTASA 861
            MGTESHSKHTTGRRGHDCQPTESLMGATHSSASSSSFTAFASGLPSSSSSGPKGPRLRTPSTNHPAPDLQPSPSKSDTPAHPDRLHGRKMTIDAILLQQAQHREASRGNGKCAPTILPSSAPHQLQYLQRRQPRPPLEGHAEETDEGNEMVDGSEAEMDEGRSEDAEESLTSGTDVGGGEGGVRRAERSSSHAGHPSGFLSLQQCDLNIVNGELGSERSGVGPVPSSSSLPASLPASASTTSAPISSFLHRIPAAFSGTSKGQEPLSSSAALMQGSGVAYGACWERGSGPREEGREGPRPGSLAASRAAAGVLGEGEHGRYWKDQSSGDMLRVETSRQDPTSLAPKTGASEGRFHHPHGQPPLHYQQQQPQKQPEGRASAPSTAYGIPRLGKTLLQLLKGGISRASSASTASTSSTTPTSSSLSSSSSSSFSSAPFSSTLSPPANPPPAAAATPPSSSVAGPALPLLGATTAEIDRLTGHRSLEVYAQMRLDERRNRPYYGLSSLPPSCPLSFSPSPDAPLPAAAVQLASHTPFPSSSSPVLEAQAFLQNGHRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYPQYLLGPAGAVRGLPDATSSAHYASVWRTGNGGHDAGGEGAVLLPDPPPFDFHSLPRRTASA
Sbjct:    1 MGTESHSKHTTGRRGHDCQPTESLMGATHSSASSSSFTAFASGLPSSSSSGPKGPRLRTPSTNHPAPDLQPSPSKSDTPAHPDRLHGRKMTIDAILLQQAQHREASRGNGKCAPTILPSSAPHQLQYLQRRQPRPPLEGHAEETDEGNEMVDGSEAEMDEGRSEDAEESLTSGTDVGGGEGGVRRAERSSSHAGHPSGFLSLQQCDLNIVNGELGSERSGVGPVPSSSSLPASLPASASTTSAPISSFLHRIPAAFSGTSKGQEPLSSSAALMQGSGVAYGACWERGSGPREEGREGPRPGSLAASRAAAGVLGEGEHGRYWKDQSSGDMLRVETSRQDPTSLAPKTGASEGRFHHPHGQPPLHYQQQQPQKQPEGRASAPSTAYGIPRLGKTLLQLLKGGISRASSASTASTSSTTPTSSSLSSSSSSSFSSAPFSSTLSPPANPPPAAAATPPSSSVAGPALPLLGATTAEIDRLTGHRSLEVYAQMRLDERRNRPYYGLSSLPPSCPLSFSPSPDAPLPAAAVQLASHTPFPSSSSPVLEAQAFLQNGHRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYPQYLLGPAGAVRGLPDATSSAHYASVWRTGNGGHDAGGEGAVLLPDPPPFDFHSLPRRTASA 861          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|1072234150|gb|OEU18880.1| (cyclin-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 129.413 bits (324), Expect = 6.213e-30
Identity = 79/252 (31.35%), Postives = 127/252 (50.40%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQT---VQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            +R  LV W+  VG++ R+  +TVHV I FLD++F     P+ +W +L  +C+ VAAKYEEAEE+ P + +L R + +G +  T    +  E+ VL  L WQL  + P+H V +++ +G +F+ DT                         W  R   + +            P  ++K+A FF + L + E+ +   YLPS +AA ++  +R++L I P WR ELV LTG  E  +      V   ++  +P
Sbjct:   23 YRRYLVDWMSDVGEQCRLHNSTVHVGILFLDKIFRSRNIPRGQWQLLATACISVAAKYEEAEEHCPPIPELLRLTKLGNAGHTPLSFRDGELEVLRYLNWQLRAVPPIHVVGYFLAKGAVFYEDT-------------------------WQGRSLIEKI------------PKYMKKYADFFCN-LTLQEY-SFQQYLPSHLAAAVILASRVALNIEPRWRPELVRLTGYSEIEITDAFHHVWSYYEEQFP 235          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|397570650|gb|EJK47387.1| (hypothetical protein THAOC_33892 [Thalassiosira oceanica])

HSP 1 Score: 132.88 bits (333), Expect = 1.928e-28
Identity = 78/252 (30.95%), Postives = 126/252 (50.00%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEEN---VPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            +R  LV W+  VG++  +  +TVHV I FLD++F     P+  W ++  +CL +AAKYEEAEE+   +P + QL++    G +  T +  EV VL  LGW+L  + PLH + +++++G +F  D+                         W  R     +            P  ++K+A FF + L + E+ +   YLPS +AA +L  +R++L I P WR EL  LTG  E+ +  V   V   ++  +P
Sbjct:  400 YRRYLVDWMSDVGEQCNLHTSTVHVGILFLDKIFRSREVPRNHWQLVATACLSIAAKYEEAEEHCPPIPDLLQLTKLHSAGHTSLTFREGEVEVLRNLGWKLRAVPPLHVIGYFLSKGAVFHDDS-------------------------WQSRSLIDKI------------PKYIKKYADFFCN-LTLQEY-SFQKYLPSHLAAAILLASRVALQITPRWRPELEALTGYSEAGIEDVFNHVWSYYEEQFP 612          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|223995003|ref|XP_002287185.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976301|gb|EED94628.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 126.716 bits (317), Expect = 2.716e-28
Identity = 78/252 (30.95%), Postives = 125/252 (49.60%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEE---NVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            +R  LV W+  VG++  +  +TVH  I +LD++F     P+  W +L  +CL VAAKYEEAEE   ++P + +L++ S +G +  + +  EV VL  LGW+L  I PLH + +Y+++G  F  D                          W  R   + +            P  ++K+A FF + L + E+ +   YLP+ +AA +L  +R +L I+P WR EL  LTG EE  +      V   ++  +P
Sbjct:   92 YRRYLVDWMSDVGEQCSLHTSTVHCGILYLDKIFREREVPRGSWQLLATACLSVAAKYEEAEEHCPHIPDLLRLTKLSSVGHTSLSFREGEVQVLRNLGWKLRAIPPLHVIGYYLSKGATFVDDA-------------------------WQGRSLIEKI------------PKYIKKYAEFFCN-LTLQEY-SFQQYLPTHLAAAILLASREALQISPRWRPELEELTGFEEKEIGEAFQHVWSYYEEQFP 304          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|219124659|ref|XP_002182616.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405962|gb|EEC45903.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 118.242 bits (295), Expect = 2.423e-26
Identity = 72/242 (29.75%), Postives = 124/242 (51.24%), Query Frame = 0
Query:  563 VGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEEN---VPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLV-HEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            VG+  R+  +T+HV++ +LD++F     P+ +W +L  +C+ VAAKYEEAEE+   +P + QL++ + +G +  + +  E+ VL  LGW+L  I P+H V +++ +GV F  D+                         W    Q++GL            P  ++K+A FF +  L  H F     YLP+ + A ++  +R++L + P W+ ELV LTG  ES +  +   V   ++  +P
Sbjct:    4 VGEHCRLHHSTIHVSVLYLDKIFRSGSIPRSQWQLLATACISVAAKYEEAEEHCPPIPDLLQLTKLADVGHTSLSFREGELRVLRHLGWRLRAIPPIHVVGYFLAKGVCFEDDS-------------------------W----QERGLVEK--------IPKYVKKYAEFFCNLTLQEHSFQQ---YLPTKLGAAIILASRVALQLEPRWKAELVRLTGYSESDISPIFQHVWNHYEEQFP 205          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|1210527719|dbj|GAX13574.1| (hypothetical protein FisN_3Lh143 [Fistulifera solaris])

HSP 1 Score: 110.153 bits (274), Expect = 1.381e-22
Identity = 70/252 (27.78%), Postives = 117/252 (46.43%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGI---GLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            +R  LV W+  VG+  R+   T+HV++ ++D++      P+  W +   +C+ VAAKYEEAEE+ P + +L R + +   G      +  EV +L+ LGWQL     LH V + + +G  F  D   G        L P +                               P  L+K+A FF + L + ++ +   Y PS +AA  +  +R++L I P WR ELV  TG +E  ++ +   +   ++  +P
Sbjct:   93 YRRFLVDWMSDVGEHYRLHNTTIHVSVLYMDKILRSDHIPRSLWQLFATACITVAAKYEEAEEHCPHIPELLRFTKLSQSGYDSLAFRDGEVEILKRLGWQLRAFPALHVVGYILAKGACFVDDAWQGRH------LIPKI-------------------------------PRYLKKYAEFFCN-LALQDY-SFQQYRPSILAAAAVMASRVALQIEPKWRPELVRRTGYDEFDILPIFNHLWSYYEEQFP 305          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|675201173|ref|XP_008909471.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566017742|gb|ETI40653.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567955119|gb|ETK80752.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567983782|gb|ETL34167.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568013276|gb|ETL87453.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568043393|gb|ETM40683.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568090166|gb|ETN05001.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570321392|gb|ETO69340.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570945153|gb|ETP10410.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570976844|gb|ETP38585.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 108.612 bits (270), Expect = 1.424e-22
Identity = 71/234 (30.34%), Postives = 117/234 (50.00%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDK-LRMRRATVHVAIAFLDRLFERH--VPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEES 782
            +R  LV W+  VG+  LRMR+  VH A+ +L+++  R   +P K+++ +L +SCL+VA K+   +E +P +++         S + +   E  + + LGW LT + PLHF++ YM + VLF  D + G +                                   + H Y       K+A FF   L++ E+ +L +Y PS +AA +L  +R +LG+ P WR+EL  LTG +E 
Sbjct:   35 YRRVLVDWMAEVGETHLRMRKEYVHAAVGYLEKVLARDAPLPRKDRFQLLALSCLRVALKFLGTDEELPPMAEFWEMGNRMYSHEEISDAEADIFQKLGWNLTMVTPLHFLQHYMGQTVLFADDQLLGSE--------------------------------LVDEAHGYYC-----KYAEFFVD-LVLQEY-SLQVYRPSVLAASVLVASRKALGVTPLWRDELSVLTGYDEK 229          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|635367806|emb|CCI44075.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 108.997 bits (271), Expect = 1.792e-22
Identity = 73/232 (31.47%), Postives = 116/232 (50.00%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERH-VPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLL-VHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEE 781
            +R  LV W+  VG+++R+R+ T+H AIA+L+R+     +P K+++ +L +SC+ +AAKY   E  VP +S+         SI  +   E++ L  L W LT + P+HFV ++++R V+F  DT+               S  S   + +                         R++  FF    L  H+F +   + PS VAA +L  +R +LGI+P WREEL  LTG  E
Sbjct:   67 YRRVLVDWMSEVGEEMRVRKTTIHSAIAYLERILMIGPLPSKDRFQVLALSCILIAAKYNGPECEVPPMSEFWEFGNRCYSINEIHSMELSTLTKLDWCLTALGPIHFVHYFVSRPVIFADDTMQDD------------SVVSEAIEYY-------------------------RRYTEFFVDLCLQEHQFRS---FRPSLVAASILAASRQALGISPTWREELELLTGYIE 258          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|1210525601|dbj|GAX15670.1| (hypothetical protein FisN_3Hh143 [Fistulifera solaris])

HSP 1 Score: 107.842 bits (268), Expect = 2.343e-22
Identity = 68/252 (26.98%), Postives = 118/252 (46.83%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDKLRMRRATVHVAIAFLDRLFERHVPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGI---GLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEESALMGVAARVLRSFQSDYP 800
            +R  LV W+  VG+  R+   T+HV++ ++D++      P+  W +   +C+ VAAKYEEAEE+ P + +L R + +   G      +  EV +L+ LGWQL     LH V + + +G  F  D   G +      L P +                               P  L+++A FF + L + ++ +   Y PS +AA  +  +R++L + P WR EL+  TG +E  ++ V   +   ++  +P
Sbjct:   40 YRRFLVDWMSDVGEHYRLHNTTIHVSVLYMDKILRSDHIPRSLWQLFATACITVAAKYEEAEEHCPHIPELLRFTKLSHSGYDSLAFRDGEVEILKRLGWQLRAFPALHIVGYILAKGACFVNDAWQGRQ------LIPKI-------------------------------PKYLKRYAEFFCN-LALQDY-SFQQYRPSMLAAAAIMASRVALQVEPKWRPELIRRTGYDEFDILPVFNHLWSYYEEQFP 252          
BLAST of EWM28235.1 vs. NCBI_GenBank
Match: gi|675201171|ref|XP_008909470.1| (hypothetical protein PPTG_14721 [Phytophthora parasitica INRA-310] >gi|566017741|gb|ETI40652.1| hypothetical protein F443_14018 [Phytophthora parasitica P1569] >gi|567955118|gb|ETK80751.1| hypothetical protein L915_13662 [Phytophthora parasitica] >gi|567983781|gb|ETL34166.1| hypothetical protein L916_13561 [Phytophthora parasitica] >gi|568013275|gb|ETL87452.1| hypothetical protein L917_13368 [Phytophthora parasitica] >gi|568043392|gb|ETM40682.1| hypothetical protein L914_13456 [Phytophthora parasitica] >gi|568090165|gb|ETN05000.1| hypothetical protein PPTG_14721 [Phytophthora parasitica INRA-310] >gi|570321391|gb|ETO69339.1| hypothetical protein F444_14050 [Phytophthora parasitica P1976] >gi|570945152|gb|ETP10409.1| hypothetical protein F441_13946 [Phytophthora parasitica CJ01A1] >gi|570976843|gb|ETP38584.1| hypothetical protein F442_13860 [Phytophthora parasitica P10297] >gi|970646127|gb|KUF86396.1| G2/mitotic-specific cyclin S13-7 [Phytophthora nicotianae] >gi|970651552|gb|KUF90357.1| G2/mitotic-specific cyclin S13-7 [Phytophthora nicotianae])

HSP 1 Score: 108.997 bits (271), Expect = 2.935e-22
Identity = 71/234 (30.34%), Postives = 117/234 (50.00%), Query Frame = 0
Query:  552 HRCRLVGWLVAVGDK-LRMRRATVHVAIAFLDRLFERH--VPPKEKWPMLGVSCLQVAAKYEEAEENVPAVSQLSRASGIGLSIQTVQRWEVAVLEGLGWQLTCIVPLHFVEFYMTRGVLFWGDTVAGGKQRLGPCLPPSLSAGSAPTKPWGWRQQQQGLQHPQQQQHQYVAPAQLRKHAHFFSSYLLVHEFPTLALYLPSFVAALLLYLARISLGIAPAWREELVTLTGVEES 782
            +R  LV W+  VG+  LRMR+  VH A+ +L+++  R   +P K+++ +L +SCL+VA K+   +E +P +++         S + +   E  + + LGW LT + PLHF++ YM + VLF  D + G +                                   + H Y       K+A FF   L++ E+ +L +Y PS +AA +L  +R +LG+ P WR+EL  LTG +E 
Sbjct:   85 YRRVLVDWMAEVGETHLRMRKEYVHAAVGYLEKVLARDAPLPRKDRFQLLALSCLRVALKFLGTDEELPPMAEFWEMGNRMYSHEEISDAEADIFQKLGWNLTMVTPLHFLQHYMGQTVLFADDQLLGSE--------------------------------LVDEAHGYYC-----KYAEFFVD-LVLQEY-SLQVYRPSVLAASVLVASRKALGVTPLWRDELSVLTGYDEK 279          
The following BLAST results are available for this feature:
BLAST of EWM28235.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110580|gb|EWM28235.1|0.000e+0100.00Cyclin [Nannochloropsis gaditana][more]
gi|1072234150|gb|OEU18880.1|6.213e-3031.35cyclin-like protein [Fragilariopsis cylindrus CCMP... [more]
gi|397570650|gb|EJK47387.1|1.928e-2830.95hypothetical protein THAOC_33892 [Thalassiosira oc... [more]
gi|223995003|ref|XP_002287185.1|2.716e-2830.95predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|219124659|ref|XP_002182616.1|2.423e-2629.75predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210527719|dbj|GAX13574.1|1.381e-2227.78hypothetical protein FisN_3Lh143 [Fistulifera sola... [more]
gi|675201173|ref|XP_008909471.1|1.424e-2230.34hypothetical protein, variant 1 [Phytophthora para... [more]
gi|635367806|emb|CCI44075.1|1.792e-2231.47unnamed protein product [Albugo candida][more]
gi|1210525601|dbj|GAX15670.1|2.343e-2226.98hypothetical protein FisN_3Hh143 [Fistulifera sola... [more]
gi|675201171|ref|XP_008909470.1|2.935e-2230.34hypothetical protein PPTG_14721 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2397rna2397Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications