EWM28188.1, cds2373 (CDS) Nannochloropsis gaditana

Overview
NameEWM28188.1
Unique Namecds2373
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:248640..248939 +
Alignment locationCM002459.1:249150..249248 +
Alignment locationCM002459.1:249365..249496 +
Alignment locationCM002459.1:249774..249924 +
Alignment locationCM002459.1:250108..250715 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28188.1
Productsoul heme-binding protein
Orig transcript idgnl|cribi|Naga_100004g11.9119.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:248640..248939 +
CM002459.1supercontigCM002459.1:249150..249248 +
CM002459.1supercontigCM002459.1:249365..249496 +
CM002459.1supercontigCM002459.1:249774..249924 +
CM002459.1supercontigCM002459.1:250108..250715 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom
IPR006917SOUL_haem-bd
Homology
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|585110533|gb|EWM28188.1| (soul heme-binding protein [Nannochloropsis gaditana] >gi|585110534|gb|EWM28189.1| soul heme-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MFYFRDHETYSNAPFPGQDFERESHMQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKMEEPVLVETTLVNEEDEGGEDDLSPSDY 429
            MFYFRDHETYSNAPFPGQDFERESHMQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKMEEPVLVETTLVNEEDEGGEDDLSPSDY
Sbjct:    1 MFYFRDHETYSNAPFPGQDFERESHMQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKMEEPVLVETTLVNEEDEGGEDDLSPSDY 429          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|553182179|ref|XP_005853692.1| (soul heme-binding protein [Nannochloropsis gaditana CCMP526] >gi|422295364|gb|EKU22663.1| soul heme-binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0
Identity = 391/404 (96.78%), Postives = 392/404 (97.03%), Query Frame = 0
Query:   26 MQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKMEEPVLVETTLVNEEDEGGEDDLSPSDY 429
            MQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAV           LASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEAR VFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVK+EEPVLVETTLVNEEDEGGEDDLSPSDY
Sbjct:    1 MQFLTRRVVVGLLLWDFLDRSGAFWLPSRLPPRVAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAV-----------LASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPSEARTVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPASYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKVEEPVLVETTLVNEEDEGGEDDLSPSDY 393          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|873226141|emb|CEM21977.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 200.29 bits (508), Expect = 3.018e-56
Identity = 139/372 (37.37%), Postives = 202/372 (54.30%), Query Frame = 0
Query:   55 LPPRVAVSNVVRLEATKSKGE--------LSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGL-LTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLRE----VSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAK------------------TNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGV-TVVDPAS--YRIFQYNPPYTLPWLRRNEILVEVR 392
            L PR A+ +  RL +T+ + E        ++W+E LE L+   T ++QRQ+L +D+V  APEIR +    IR+  V+ +   + ++++RRQ+ EDI+P   SE  + A  LL  +P LAQR+   +   P  L +  +E    ++T L  E R+ F RTPEGLETP + +L++   +E+R+Y  Y +    M +      +T           TG AF  LA Y+FG N  K                    MAMTTPV I K    +GA    +M FI+ S YT +TAP P D  + +     + LA R+F+GFATEGE+ RQL  L   +  +G   VVD +S  +++FQYNPP TLPWLR+NE+ V VR
Sbjct:   28 LVPR-AMPSARRLRSTRLRAESQPSSQEPMTWEEKLEQLLKFDTPISQRQLLLRDLVQEAPEIRDE----IRDTLVNAVPRREDVESLRRQVVEDILPAARSEGPEVASRLLSSLPALAQRA---VTMGPSMLTQVQKEGGLPIAT-LIKEGRSAFQRTPEGLETPMYTLLYKVDEFEVRQYPEYAICTVRMDTEKDDRYTTDL-------LATGQAFRQLAAYLFGENRPKPMAQVTLGEAEPPAADKGVAMAMTTPVIIDKSV-PKGA----TMSFILPSDYTLDTAPLPRDIDIDIEKAGGDVLAVRDFSGFATEGEISRQLDKLRDAIALEGKWEVVDESSDAFKVFQYNPPQTLPWLRKNEVAVRVR 378          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|546303264|ref|XP_005711971.1| (unnamed protein product [Chondrus crispus] >gi|507108316|emb|CDF32306.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 194.126 bits (492), Expect = 1.931e-53
Identity = 126/328 (38.41%), Postives = 177/328 (53.96%), Query Frame = 0
Query:   77 SWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVD-GLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALPS---------EARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGE-AYSMRFIMASPYTTETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPA--SYRIFQYNPPYTLPWLRRNEILVEV 391
            SWQE L++L+ PT  +  +QVL QD+  RAPE+  DV     +G  D GL   G+  V RQ  ED++P L S             P+   ++ E+ P     ++ +   + + +P+         E RN+F +TPEGL TP F+VL +  GYEIR+Y    +A T+M S  A A   S    + S +  G +FN LAG++FG NE+KT M MTTPV + K       GE   +M FI+    + E  P+ +D  V+L   A + LA  EF GF T+GE +RQ   L+  L RD + +   A  SY+   YN P TLP LRRNEI++EV
Sbjct:  147 SWQEELKMLLDPTMPVGVKQVLVQDLAKRAPEVFNDVLSG--KGCADIGL--QGVADVIRQFQEDLLPDLVSNG-----------PRYVAKAAEDFPNAISGMSSSSSGMPSKMPTPVSPEEVQREFRNIFNKTPEGLFTPDFKVLGQFEGYEIRQYPTLIIAETKMTSETASA---SGATEVESASAMGQSFNNLAGFLFGKNESKTAMKMTTPVILSK-------GEPEETMSFIIGEYDSVEAVPKTLDDTVKLREQAGQVLAVSEFTGFVTQGEAKRQRKKLMDKLARDNIALGPDAESSYKCMIYNGPSTLPNLRRNEIMLEV 449          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|223999893|ref|XP_002289619.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974827|gb|EED93156.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 194.126 bits (492), Expect = 2.648e-53
Identity = 136/362 (37.57%), Postives = 186/362 (51.38%), Query Frame = 0
Query:   78 WQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLT-------DGIKAVRRQLTEDIIPQLAS-------EPEQAAKILLEEMP----KLAQRSYENLP----KNPKELAETLR------------EVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPM---------DSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDP----ASYRIFQYNPPYTLPWLRRNEILVEVR 392
            WQE+LELL+ P T +A+RQ++  D+++   +I+  V  A+R+  VDGLLT       +G +AV RQLT DI+P +A+       +P+    +L E++P    K+  R    L     KN  EL + +R            E +  +  EA+NVFL TPEGL  P + V+ +  GYEIREYD YTVA T M    +K G   +   L S    G AFN LA Y+FGAN+ K  M      E+         GE   MRF +       + P+P             V +       LA ++F GF TEGEV RQ  +LL+ L  DG+ +  P      + IFQYNPPYT+P LRRNEI + VR
Sbjct:   92 WQENLELLLLPDTPVAERQIVLSDLLNAGDQIQDSVRAALRDRKVDGLLTPTGKRLQEGSRAVARQLTSDILPGIAAVVASSSNKPKSPVDVLAEDLPTVVPKIGSRVLNALTNQAQKNLSELQKDVRAGDPFRSITRLQEQTAEIAQEAKNVFLETPEGLAGPPYTVVSQKDGYEIREYDGYTVASTSM----SKVGEPYSMDDLAS---GGEAFNALAAYLFGANDEKEVM------EMTTPVTTTSTGE---MRFYLRERDDNSSFPKPQVENDEVFNEKGAVNIQEIPGATLAVQKFTGFVTEGEVARQKDALLTSLAIDGIEIDVPHGKEVPHVIFQYNPPYTIPILRRNEIGIPVR 437          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|397569803|gb|EJK46977.1| (hypothetical protein THAOC_34334 [Thalassiosira oceanica])

HSP 1 Score: 192.971 bits (489), Expect = 9.311e-53
Identity = 131/366 (35.79%), Postives = 184/366 (50.27%), Query Frame = 0
Query:   78 WQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLT-------DGIKAVRRQLTEDIIPQLAS------------EPEQAAKILLEEMPKL---------------AQRSYENLPKN-----PKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMD---------SKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVV----DPASYRIFQYNPPYTLPWLRRNEILVEV 391
            WQE++E L+ P T +A+RQ++  D+V+ + EI+  VE A+RE ++DGLLT       +G KAV RQ+T DIIP LA+            +     ++L+E++P +               AQ +  NL  +     P    E +++ +  +  EA+N+F  TPEGL  P ++V+    GYEIREYD YTVA T M   D +  +      +      G AFN LA Y+FGAN+    + MTTPV      Q         MRF + +       P P+           KV +       LA   F GF TEGEV RQ  +LL+ L  DG+ +     +   + IFQYNPPYTLP LRRNEI + V
Sbjct:   79 WQENIETLLKPDTNIAERQIVLSDLVNSSDEIQSAVETALRERNIDGLLTPTQKRLQEGTKAVARQITSDIIPGLAAVAAGEKSPSSGRQVRNPVEVLVEDLPTVVPKIGSRVFNAIANQAQNNIRNLQDDIQSGDPLRSIERIQKQTEEIQKEAKNIFSETPEGLVGPPYRVVSVAEGYEIREYDGYTVASTSMKKVDDEQFN------MDDLASEGEAFNALAAYLFGANDKSEILDMTTPVTTTSSGQ---------MRFYL-NKSGDSNFPEPVQENDEIFNEKGKVVVEDVPPATLAVARFTGFVTEGEVTRQKDALLTCLGIDGIEIDVEHGNVVPHVIFQYNPPYTLPVLRRNEIGIPV 428          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|1210530239|dbj|GAX11155.1| (hypothetical protein FisN_9Hh248 [Fistulifera solaris])

HSP 1 Score: 174.866 bits (442), Expect = 2.708e-46
Identity = 131/367 (35.69%), Postives = 182/367 (49.59%), Query Frame = 0
Query:   77 SWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLT-------DGIKAVRRQLTEDIIPQLASE--PEQAAKILL----------EEMPKLAQRSYENLPKNP----KELAETLREVSTALPS-----------EARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEM---GSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSK----------VRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVD-----PASYRIFQYNPPYTLPWLRRNEILVEV 391
            SWQE L+  ++P T  A++QVL  D+     EI+  ++ A+R+G++D LLT       +G +AV RQ+  DI+P LA    P   ++ L           E++ +L  R +  L        K L E L++ +T +P            EA NVF  TP GL+ P +QV+     YEIR+Y+ YTVA T M   G+ D      +    LG     G AFN+LA Y+FGAN  K  + MTTPV          +GE   MRF + S       P P++            +R+      RLA R F GF T+GEV RQ  +LL+ L  DG   +D        + IFQYNPPYT+P +RRNEI V +
Sbjct:   62 SWQEDLDEFLNPMTPAARKQVLLSDLAGANSEIQASIQSALRDGTIDPLLTPRGKRLQEGTRAVARQVVSDILPSLAISFPPPSVSQGLFPPPPFPFPPAEDINRLGTRVFNALQNQIQTGFKNLQEDLQDPTTRIPQRLSQQTEEILQEAANVFSETPAGLKEPPYQVVATTEAYEIRDYEGYTVAITNMMMTGTDDPYFTPNTNN--LGE---QGRAFNSLAAYLFGANRQKEVLDMTTPVTTTM------SGE---MRFYIDS----NNPPDPLEQDESKNVYETDTIRIEEIPPARLAVRRFYGFVTQGEVARQKEALLTALALDGDYELDVPHGQTVKHLIFQYNPPYTIPVVRRNEIAVPI 410          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|1210514164|dbj|GAX26946.1| (hypothetical protein FisN_9Lh248 [Fistulifera solaris])

HSP 1 Score: 172.94 bits (437), Expect = 1.442e-45
Identity = 144/418 (34.45%), Postives = 201/418 (48.09%), Query Frame = 0
Query:   59 VAVSNVVRLEATKSKGELSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLT-------DGIKAVRRQLTEDIIPQLASE--PEQAAKILL----------EEMPKLAQRSYENLPKNP----KELAETLREVSTALP-----------SEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEM---GSSDAKAGSTSAGPVLGSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTTETAPRPMDSKVRLTTTAR------ERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDPA-----SYRIFQYNPPYTLPWLRRNEILVEVRGGPSVGTVKMEEPVLVETTLVNEEDEGGEDDLSPSD 428
            +  S+  +   TK+K   SWQE L+  ++P T  A++QVL  D+     +I+  ++ A+R+G++D LLT       +G +AV RQ+  DI+P LAS   P   ++ L           E++ +L  R +  L        K L E L++ +T +P            EA NVF  TP GL+ P + V+     YEIR+Y+ Y VA T M   G+ D         P   +    G AFN+LA Y+FGAN  K  + MTTPV          +GE   MRF + S    E   +     V  T T R       RLA R F GF T+GEV RQ  +LL+ L  DG   +D A      + IFQYNPPYT+P +RRNEI V +     V  V+ +E            D   E+ +SPSD
Sbjct:   53 ITSSSATKDPITKNK---SWQEDLDEFLNPMTPAARKQVLLSDLAGANSDIQASIQSALRDGTIDPLLTPRGKRLQEGTRAVARQVVSDILPSLASSFPPPSVSQGLFPPPPFPFPPAEDINRLGTRVFNALQNQIQTGLKNLQEDLQDPTTRIPQRLSQQTEEILQEAGNVFSETPAGLKEPPYTVVATTEAYEIRDYEGYKVAITNMMMTGTDDPY-----FTPNTSNLAEQGRAFNSLAAYLFGANRQKEVLDMTTPVTTTM------SGE---MRFYIDSINPPEPLEQDESKNVYETDTIRIEEIPPARLAVRRFYGFVTQGEVARQKEALLTALALDGDYELDVAHGQTVKHLIFQYNPPYTIPVVRRNEIAVPIS---RVSEVEAQESA----------DRISENWISPSD 440          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|219114357|ref|XP_002176349.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402595|gb|EEC42585.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 168.703 bits (426), Expect = 5.583e-44
Identity = 130/357 (36.41%), Postives = 174/357 (48.74%), Query Frame = 0
Query:   77 SWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLT-------DGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRS------------YENLPK------NPKELAETLREVSTALPSEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMGSSDAKAGSTSAGPVL-GSPTMTGGAFNTLAGYIFGANEAKTNMAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYTT--ETAPRPM---DSK-------VRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDP----ASYRIFQYNPPYTLPWLRRNEILVEV 391
            +W++ L+ L+ P T M +RQ LF DVVS   +IR+ VE A+R+  +D LLT       DG +AV RQL+ DI+P LA+        L    P+  Q++             +NL        +P  +   + + ++    EA NV   TP GL+ P + ++   + YEIR+Y  Y V  T M           AG V   S   +G AFNTLA YIFGAN     M MTTPV          +GE   MRF +A    T  +  P P+   +SK       + +      RLA R F GFAT GE  RQ   LL+ L  D V +  P      + +FQYNPPYT+P LRRNEI V V
Sbjct:   74 TWKDDLDELLDPATEMNRRQALFTDVVSANQDIREAVETALRDRKIDPLLTPTGKKLQDGTRAVARQLSTDILPSLAANARNPPTQLFSVRPQDLQKNGNRFLNAVTNQMQQNLQTLQRDLLDPSRIPSRISQQTSEFVQEAANVLRETPVGLKEPPYTLVATTNEYEIRDYAGYKVVSTNMA---------PAGEVYRDSMAQSGQAFNTLASYIFGANRDSKVMEMTTPVTTTM------SGE---MRFYLAQNDETPDQRIPEPLAQDESKSVYETGNILIQDIPPARLAVRRFPGFATAGEQARQKEILLAALSLDDVELDVPHGQTVGHVLFQYNPPYTVPVLRRNEIAVPV 412          
BLAST of EWM28188.1 vs. NCBI_GenBank
Match: gi|873238034|emb|CEL96738.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 153.295 bits (386), Expect = 1.950e-38
Identity = 117/360 (32.50%), Postives = 178/360 (49.44%), Query Frame = 0
Query:   76 LSWQESLELLMSPTTGMAQRQVLFQDVVSRAPEIRKDVEEAIREGSVDGLLTDGIKAVRRQLTEDIIPQLASEPEQAAKILLEEMPKLAQRSYENLPKNPKELAETLREVSTALP-----SEARNVFLRTPEGLETPSFQVLHEGHGYEIREYDPYTVAYTEMG-------SSDAKAGSTSAGPVL----------GSPTMTGGAFNTLAGYIFGANE-------------AKTN------MAMTTPVEIRKDAQHRGAGEAYSMRFIMASPYT-TETAPRPMDSKVRLTTTARERLAAREFAGFATEGEVQRQLISLLSLLDRDGV-TVVDPASYRIFQYNPPYTLPWLRRNEILVEVR 392
            +SW+E ++ L+ P T M+QR VL QD++ +APEIR ++   +  G+V      G  A+RRQ+  D++P LAS+  Q    ++  +P  +Q    +LP     +  +LR V   LP      E +N   RTP+G+ETP + +  +   YE+R Y  Y++A  +MG       ++D  A  T+ G +L          G+ T       + +G +   N+             A T+      M +TTP+ I +  +    G  Y M F++ S Y     AP P D  V +     E +A   FAGFATE E+QR+L  L   + RDGV  V D  ++R+  YN P  LPWLR NE+ V V+
Sbjct:   74 MSWEEKIDHLLRPATTMSQRSVLAQDLLKQAPEIRSEIVSLL-LGAVPRRRDLG--ALRRQVLRDLLPTLASDMPQLTTKVVARLPTASQSVARSLPP---LMRRSLRAVRRGLPLAPLLREGKNALRRTPQGIETPRYSLERKVDEYEVRRYSGYSIASVKMGRVSPGKITTDLLATGTALGKLLAYYLGNNVPLGASTTAASNGTSYSGAMGMMNDTQIPAKRPPKPPTATTDTDGGVVMDLTTPIMIERTRK----GALY-MTFVLPSEYQQVGRAPEPYDIAVSVQERLPETVAVLRFAGFATENEIQRRLEELKVEIARDGVFAVADDDAFRLHMYNGPQKLPWLRSNEVCVNVK 422          
The following BLAST results are available for this feature:
BLAST of EWM28188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110533|gb|EWM28188.1|0.000e+0100.00soul heme-binding protein [Nannochloropsis gaditan... [more]
gi|553182179|ref|XP_005853692.1|0.000e+096.78soul heme-binding protein [Nannochloropsis gaditan... [more]
gi|873226141|emb|CEM21977.1|3.018e-5637.37unnamed protein product [Vitrella brassicaformis C... [more]
gi|546303264|ref|XP_005711971.1|1.931e-5338.41unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|223999893|ref|XP_002289619.1|2.648e-5337.57predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397569803|gb|EJK46977.1|9.311e-5335.79hypothetical protein THAOC_34334 [Thalassiosira oc... [more]
gi|1210530239|dbj|GAX11155.1|2.708e-4635.69hypothetical protein FisN_9Hh248 [Fistulifera sola... [more]
gi|1210514164|dbj|GAX26946.1|1.442e-4534.45hypothetical protein FisN_9Lh248 [Fistulifera sola... [more]
gi|219114357|ref|XP_002176349.1|5.583e-4436.41predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|873238034|emb|CEL96738.1|1.950e-3832.50unnamed protein product [Vitrella brassicaformis C... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2381rna2381Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications