EWM28324.1, cds2354 (CDS) Nannochloropsis gaditana

Overview
NameEWM28324.1
Unique Namecds2354
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:191578..193074 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28324.1
Productatp-binding sub-family b (mdr tap) member 10
Orig transcript idgnl|cribi|Naga_100109g2.6592.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:191578..193074 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Homology
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|585110673|gb|EWM28324.1| (atp-binding sub-family b (mdr tap) member 10 [Nannochloropsis gaditana])

HSP 1 Score: 983.786 bits (2542), Expect = 0.000e+0
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0
Query:    1 MVADEPVGQSLLRRRRKESPPSMPVATLDSVGPGRVLSPAAAAADPAEKAASKESDRHALRRLWRETIPEEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPPPSLPPSRPPPRPPPPPPSLPFLIRPRRPEATCASRRFDSPTRTGPRSLSCRAWTARSSRGRWRPSLGPQGRGSLPSWPSSSSSTGSREGGREGEGYGWMGRR 498
            MVADEPVGQSLLRRRRKESPPSMPVATLDSVGPGRVLSPAAAAADPAEKAASKESDRHALRRLWRETIPEEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPPPSLPPSRPPPRPPPPPPSLPFLIRPRRPEATCASRRFDSPTRTGPRSLSCRAWTARSSRGRWRPSLGPQGRGSLPSWPSSSSSTGSREGGREGEGYGWMGRR
Sbjct:    1 MVADEPVGQSLLRRRRKESPPSMPVATLDSVGPGRVLSPAAAAADPAEKAASKESDRHALRRLWRETIPEEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPPPSLPPSRPPPRPPPPPPSLPFLIRPRRPEATCASRRFDSPTRTGPRSLSCRAWTARSSRGRWRPSLGPQGRGSLPSWPSSSSSTGSREGGREGEGYGWMGRR 498          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|299472091|emb|CBN79676.1| (similar to ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Ectocarpus siliculosus])

HSP 1 Score: 209.92 bits (533), Expect = 1.236e-56
Identity = 127/335 (37.91%), Postives = 188/335 (56.12%), Query Frame = 0
Query:   62 RLWRETIPEEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            RLW E    E+G++ A    ++ SS+ N+  P ++ +++DR +K         +   E    G   S + F    L +F AG++ S  R + L MA  G A +LR +LF +L+ Q+KAFFD+      + GEL  +L  DVD SS VFT R+A  LRS +S++N ++ L  +SP LT VSL  +P+  +  +      R L+ R R + + A  FAQ RL N+ TV AF  E  +   + ++L+EA  L +  + AKG F G LF    V++ AVL  GG+  G G ++ G LTSF+ YTG V LGFSGL++  ++  +   +A RVF LVDR P
Sbjct:  109 RLWSEA-KHERGHLAAAGVCLMASSSANLMAPAIMAKVIDRASKRGSGSGS--SSSLEMCIAGRPVSDRTFFLACLGVFAAGSLASWGRVYALAMATAGVAEKLRARLFAALMVQEKAFFDEK-----KAGELAPILAEDVDVSSTVFTERMASVLRSLNSSINASIALLSISPHLTMVSLSTVPIVGSVAMLYYKHVRKLSMRLRDMDSEAQAFAQARLANVRTVRAFANETLEAQRFRQMLEEASELRAGEAGAKGFFRGGLFGMVGVSLMAVLWVGGSHVGDGSMTAGQLTSFAGYTGWVGLGFSGLATGNANIARGLASAERVFALVDRTP 435          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|1214682508|gb|OWZ00776.1| (ABC transporter, partial [Phytophthora megakarya])

HSP 1 Score: 189.889 bits (481), Expect = 4.798e-51
Identity = 116/328 (35.37%), Postives = 186/328 (56.71%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQ-VSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  GVT M ++SA N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+ AF+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++PV     +     +  L  + +   A  TG A+ERL N+ TV  F+AE +DE  +   +++   + ++    A+G+FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +F+L+  PP
Sbjct:   55 EEKLPLTVGVTGMTIASAMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELAFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPVVGTGAMLFSKFSSRLAKKHQNSVADMTGVAEERLNNIFTVKLFSAE-QDELDHFEKINQGILVNAKRAKRARGMFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRMSSEALFNLLSLPP 361          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|695394255|ref|XP_009520834.1| (hypothetical protein PHYSODRAFT_297174 [Phytophthora sojae] >gi|348685731|gb|EGZ25546.1| hypothetical protein PHYSODRAFT_297174 [Phytophthora sojae])

HSP 1 Score: 187.193 bits (474), Expect = 6.718e-50
Identity = 117/328 (35.67%), Postives = 187/328 (57.01%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVF-TAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  GV  M ++SA N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+ AF+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+  T A++ +   +R     Q ++A   TG A+ERL N+ TV  F+AE  +   + ++     A   +   A+G+FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  ++++ +FDL+  PP
Sbjct:   57 EEKLPLTVGVAGMTIASAMNLVFPRIMGKAID---VASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELAFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKFSSRLAKTHQNSVA-DMTGVAEERLNNIFTVKLFSAEQDELDHFEKINKGILANAKRAKRARGVFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRMSSQALFDLLSLPP 363          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|301111512|ref|XP_002904835.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262095165|gb|EEY53217.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4])

HSP 1 Score: 189.889 bits (481), Expect = 8.037e-50
Identity = 114/327 (34.86%), Postives = 182/327 (55.66%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  GVT M ++S  N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+  F+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+     +    L+  L+ + +   A  TG A+ERL N+ TV  F+AE  +   + ++     A   +   A+G+FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +FDL+  PP
Sbjct:   48 EEKLPLAVGVTGMTIASGMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELGFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKLSSRLSKQHQNSVADMTGVAEERLNNIFTVKLFSAEQDELDHFEKINKSILANAKRAKRARGVFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRLSSEALFDLLSLPP 354          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|551642565|ref|XP_005824079.1| (hypothetical protein GUITHDRAFT_78381 [Guillardia theta CCMP2712] >gi|428168151|gb|EKX37099.1| hypothetical protein GUITHDRAFT_78381 [Guillardia theta CCMP2712])

HSP 1 Score: 189.119 bits (479), Expect = 1.097e-49
Identity = 108/350 (30.86%), Postives = 189/350 (54.00%), Query Frame = 0
Query:   47 AEKAASKESDRHALRRLWRETIPEEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
             E+ + +++++    RL      ++K  +     AM ++S  N+AFP +I  ++D  +  + +     A  K   S             +L++F  GA+GS +RT+   +A +  ++RLR +LF+++L+Q+  FFD          ++   +  DV A +   T+  A   R T+SA+ G++MLF +SP+LT  +LG++P+     +   +  + ++ + +   +       E+L N+ TV  F+ ED +   YA LL+         + A+GLF+G L FGG  ++  VL +GGTL  +  ++VG LTSF+MY+  V LGFSGLS   ++T KA  +A+RVF+++DR P
Sbjct:    9 VERRSEEKTNKQLFLRLLNFISNDDKKTLAIACIAMSLTSVNNLAFPKIISNLIDSMSNSSNTQ----AKRKLVVS-------------SLIMFAVGAVGSWLRTYLFTIASDSVSKRLRVELFKAILKQESGFFDQTPVQ-----DMQCRMTDDVQAMANATTSNFAKVYRYTNSALGGSIMLFSISPRLTVATLGVVPLVGVTGMLYGMRAKKMSKKMKENISRIASSVDEKLANIRTVRLFSMEDYEGEEYANLLNSTQEDVKHAAHAEGLFLGGLAFGGFTSLLGVLYYGGTLVERNLITVGALTSFAMYSATVGLGFSGLSQVYAETLKALSSAQRVFEILDRKP 336          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|570967319|gb|ETP30438.1| (hypothetical protein F442_20577 [Phytophthora parasitica P10297])

HSP 1 Score: 188.348 bits (477), Expect = 3.487e-49
Identity = 112/327 (34.25%), Postives = 179/327 (54.74%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  G+T M ++S  N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+  F+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+     +     +  L+ +     A  TG A+ERL N+ TV  F+AE  +   + ++     A   +   A+G FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +FDL+  PP
Sbjct:   60 EEKLPLAVGITGMTIASGMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELGFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKFSSRLSKKHHNSVADMTGIAEERLNNIFTVKLFSAEQDELDHFEKINKNILANAKRAKRARGAFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRLSSEALFDLLSLPP 366          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|675178367|ref|XP_008898068.1| (hypothetical protein PPTG_06061 [Phytophthora parasitica INRA-310] >gi|566009509|gb|ETI32420.1| hypothetical protein F443_20778 [Phytophthora parasitica P1569] >gi|567975685|gb|ETL26226.1| hypothetical protein L916_20065 [Phytophthora parasitica] >gi|568005150|gb|ETL79455.1| hypothetical protein L917_19926 [Phytophthora parasitica] >gi|568035046|gb|ETM32704.1| hypothetical protein L914_19959 [Phytophthora parasitica] >gi|568102312|gb|ETN16994.1| hypothetical protein PPTG_06061 [Phytophthora parasitica INRA-310] >gi|570313203|gb|ETO61151.1| hypothetical protein F444_20795 [Phytophthora parasitica P1976])

HSP 1 Score: 188.348 bits (477), Expect = 3.819e-49
Identity = 112/327 (34.25%), Postives = 179/327 (54.74%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  G+T M ++S  N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+  F+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+     +     +  L+ +     A  TG A+ERL N+ TV  F+AE  +   + ++     A   +   A+G FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +FDL+  PP
Sbjct:   60 EEKLPLAVGITGMTIASGMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELGFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKFSSRLSKKHHNSVADMTGIAEERLNNIFTVKLFSAEQDELDHFEKINKNILANAKRAKRARGAFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRLSSEALFDLLSLPP 366          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|970646753|gb|KUF86801.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora nicotianae])

HSP 1 Score: 187.193 bits (474), Expect = 8.454e-49
Identity = 112/327 (34.25%), Postives = 179/327 (54.74%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  G+T M ++S  N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+  F+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+     +     +  L+ +     A  TG A+ERL N+ TV  F+AE  +   + ++     A   +   A+G FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +FDL+  PP
Sbjct:   52 EEKLPLAVGITGMTIASGMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELGFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKFSSRLSKKHHNSVADMTGIAEERLNNIFTVKLFSAEQDELDHFEKINKNILANAKRAKRARGAFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRLSSEALFDLLSLPP 358          
BLAST of EWM28324.1 vs. NCBI_GenBank
Match: gi|567946988|gb|ETK72788.1| (hypothetical protein L915_20198 [Phytophthora parasitica] >gi|570936418|gb|ETP01675.1| hypothetical protein F441_21161 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 186.808 bits (473), Expect = 1.365e-48
Identity = 111/327 (33.94%), Postives = 179/327 (54.74%), Query Frame = 0
Query:   70 EEKGYMGAGVTAMLVSSATNMAFPTLIGRIVDRTTKGAGSGDGGGAGEKETSSEGEVASLQVFLGRALLIFVAGAIGSCVRTHCLRMAKEGTARRLRKKLFRSLLRQDKAFFDDPETGGHRTGELVAVLEGDVDASSEVFTTRLADGLRSTSSAVNGTLMLFRLSPKLTGVSLGLIPVFTAAIVTNVVLTRSLTARQRALAAGATGFAQERLGNLVTVHAFTAEDRDEAAYARLLDEAHALTSQVSLAKGLFMGSLFFGGSVTMSAVLCFGGTLAGQGELSVGDLTSFSMYTGLVALGFSGLSSYVSDTWKAAVAARRVFDLVDRPP 396
            EEK  +  G+T M ++S  N+ FP ++G+ +D     +G    GG   K             F+   L  F  G++GS +RT+ L M  E  A +LR++L++ LL Q+  F+++      + GELV  L GD   ++      L++G RS +SAV  + ML  +SPKLT VSL ++P+     +     +  L+ +     A  TG A++RL N+ TV  F+AE  +   + ++     A   +   A+G FMG L    + ++ +VL FGG+L G GEL++G LTSF++Y+G + LGFSG+SS +S+  K  +++  +FDL+  PP
Sbjct:   60 EEKLPLAVGITGMTIASGMNLVFPRIMGKAIDV---ASGKPAPGGLSRKG------------FVVVVLATFFTGSVGSFLRTYSLGMVAERIAAKLRRRLYKVLLSQELGFYNN-----RKVGELVTRLSGDCQQTANAVVDVLSNGYRSLNSAVGASCMLLTISPKLTLVSLTILPLVGTGAMLFSKFSSRLSKKHHNSVADMTGIAEDRLNNIFTVKLFSAEQDELDHFEKINKNILANAKRAKRARGAFMGGLSLSINCSLFSVLYFGGSLVGSGELTIGTLTSFALYSGFMGLGFSGVSSCLSEMKKTRLSSEALFDLLSLPP 366          
The following BLAST results are available for this feature:
BLAST of EWM28324.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110673|gb|EWM28324.1|0.000e+0100.00atp-binding sub-family b (mdr tap) member 10 [Nann... [more]
gi|299472091|emb|CBN79676.1|1.236e-5637.91similar to ATP-binding cassette, sub-family B (MDR... [more]
gi|1214682508|gb|OWZ00776.1|4.798e-5135.37ABC transporter, partial [Phytophthora megakarya][more]
gi|695394255|ref|XP_009520834.1|6.718e-5035.67hypothetical protein PHYSODRAFT_297174 [Phytophtho... [more]
gi|301111512|ref|XP_002904835.1|8.037e-5034.86ATP-binding Cassette (ABC) Superfamily [Phytophtho... [more]
gi|551642565|ref|XP_005824079.1|1.097e-4930.86hypothetical protein GUITHDRAFT_78381 [Guillardia ... [more]
gi|570967319|gb|ETP30438.1|3.487e-4934.25hypothetical protein F442_20577 [Phytophthora para... [more]
gi|675178367|ref|XP_008898068.1|3.819e-4934.25hypothetical protein PPTG_06061 [Phytophthora para... [more]
gi|970646753|gb|KUF86801.1|8.454e-4934.25ATP-binding Cassette (ABC) Superfamily [Phytophtho... [more]
gi|567946988|gb|ETK72788.1|1.365e-4833.94hypothetical protein L915_20198 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2362rna2362Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications