EWM28349.1, cds2323 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|585110706|gb|EWM28349.1| (threonine synthase [Nannochloropsis gaditana]) HSP 1 Score: 609.757 bits (1571), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGWFRDPPSHDCQPVE 300 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGWFRDPPSHDCQPVE Sbjct: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGWFRDPPSHDCQPVE 300
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|1129189602|gb|OLP95033.1| (Threonine synthase-like 2 [Symbiodinium microadriaticum]) HSP 1 Score: 152.525 bits (384), Expect = 4.995e-39 Identity = 97/285 (34.04%), Postives = 141/285 (49.47%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVA--MRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAY 283 MRY STR R +F +A+ G+APDGG+++PE +P +S VL +WR L +P L +L+ LF D E+ + L ++V S+A+F+ PE+V P + A+ + S ++IAELFHGP+ FKDLG Q+L LL H+ + +R TFLV T+GDTGP+A AV ++++V +P G++S Q QM T GVG +VV EG DD+D+PI L D A+ Sbjct: 1 MRYRSTR--------GERGATFEQALSRGYAPDGGLYVPEELPKISLDVLRTWRKLDFPSLALELMKLFAGD----------ELTEAELAEVVRGSYANFSHPEIV-------PVVPLQRRGAADAES------------------QVFIAELFHGPTFCFKDLGQQLLVRLLAHFSKRRNQRRTFLVSTTGDTGPAAMRAVSDAACANLQIIVFFPDGQISELQRRQM-TTVSGVGA----------------------KVVTFEGGGDDMDLPIKKLSSDAAF 219
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|470468597|ref|XP_004341915.1| (threonine synthase [Acanthamoeba castellanii str. Neff] >gi|440798750|gb|ELR19815.1| threonine synthase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 151.754 bits (382), Expect = 1.099e-38 Identity = 95/286 (33.22%), Postives = 142/286 (49.65%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESW--RGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYP-LGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAY 283 M++ STR S +F EAVL G+APDGGM +P IP + RG L W R LT+P+L ++ ALF+D+ E+ + LR ++ + F F E+V P +L+ T + S +AELFHGP+LAFKDLG+Q + ++ E+ + + R+++ +V TSGDTG +A V+G+ M + VL P GR++ QE QM T+ NV +AV+G+SDD DV + +F DP + Sbjct: 1 MKFKSTR-------GGSEVLTFEEAVLRGYAPDGGMIVPATIPCIERGTLRQWAARNLTFPQLCEEIFALFIDE---------EEMPRADLRALLQSCFGEFTDDEIV-----PIKHLAPRHATEAGSGF------------------EFDVAELFHGPTLAFKDLGLQFIGHMFEYLVRKRQRKLSIIVATSGDTGSAAIHCVKGRQNMNIFVLLPGQGRIAELQERQM-----------------------TTVLDKNVFSIAVDGTSDDADVAVKGVFADPEF 224
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|255089865|ref|XP_002506854.1| (predicted protein, partial [Micromonas commoda] >gi|226522127|gb|ACO68112.1| predicted protein, partial [Micromonas commoda]) HSP 1 Score: 148.288 bits (373), Expect = 1.086e-37 Identity = 101/292 (34.59%), Postives = 142/292 (48.63%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGR-VSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSS---DDLDVPIASLFGDPAYR--CG 286 MRY+STR + S + +L G+APDGG+++PERIP V L SW GLT+P+L ++L+LF++ D VD LR+++D SFA+F P+V PL+ + P + + ELFHGP+++FKD+ M L +L +H+L + R LV T+GDTGP+AA A G+ + VLYP G +S QE QM T+ PNV V V G + DDLD +A LF D + R CG Sbjct: 1 MRYVSTR--------GFKYASLEDVILNGFAPDGGLYVPERIPVVEPDTLRSWSGLTFPQLAFEVLSLFIEPSD---------VDPSDLRRLLDESFAAFDHPDVA-----------------------PLA-----------KTPDMLVLELFHGPTMSFKDVAMGFLISLTDHFLRRRNERRNVLVATTGDTGPAAAHAAIGRDRVHAWVLYPTGGFISDTQERQMT-----------------------TIDEPNVHAVGVGGCADGGDDLDAIVAKLFADESLREECG 218
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|754353296|ref|XP_004342475.2| (threonine synthase-like protein [Capsaspora owczarzaki ATCC 30864] >gi|765557970|gb|KJE98224.1| threonine synthase-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 145.976 bits (367), Expect = 2.315e-36 Identity = 100/280 (35.71%), Postives = 145/280 (51.79%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGD 280 M ++STR S+ P+S SF VL+G+A DGG+F+P+ IP ++ L +W+ L+Y L ++L LF+ + A + L I+DA FA F PE V +P ++ST + P + +AE++HGP+ AFKDL + +L LLEHYL + G T +VGTSGDTG +A +V+G ++ +VVL+P GR+S Q QM + PNV V AV+GSSDDLDVPI ++ D Sbjct: 1 MAFVSTR--ASAVRPASGLASFETTVLSGYASDGGLFMPQHIPTITASDLAAWQSLSYVGLAKQILPLFL-----TNPADQAALPVAALHDILDACFAKFDNPENV-LPVVPLMLPQNASTGGA--------------------PQQVLVAEMWHGPTGAFKDLALSLLGRLLEHYLSRTGEHRTIVVGTSGDTGSAAIDSVRGNTSVDIVVLFPEGRISRVQMLQM-----------------------ALVREPNVHVYAVDGSSDDLDVPIRNVLND 229
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|167527085|ref|XP_001747875.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163773624|gb|EDQ87262.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 145.206 bits (365), Expect = 5.182e-36 Identity = 91/255 (35.69%), Postives = 126/255 (49.41%), Query Frame = 0 Query: 30 WAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYR 284 W GGM +PE IP ++ L W L Y EL L +D + ED LR I+ S A FA P+V P L++ +S + L ++ EL+HGP+LAFKDLG+Q+L NLLEH+L + R+ +VGTSGDTG +A AV+G+ ++L VL+P GR+S QE QM AG NV V ++G+SDDLD PI ++F D A++ Sbjct: 84 WQRCGGMLMPEAIPQLTADELRHWSTLGYGELCFAFLRKMIDPAELEDD---------ELRGIIAQSTAVFAHPDVT-----PVHTLNTDRVAGASCSQL-------------------HVCELWHGPTLAFKDLGLQILGNLLEHFLARRKDRLNVVVGTSGDTGSAAIEAVRGRDHLQLFVLFPHGRISHIQELQM---------------------TAGAESASNVHVWGMDGTSDDLDQPITAVFQDTAFK 284
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|1000783583|gb|KXN74716.1| (putative threonine synthase [Conidiobolus coronatus NRRL 28638]) HSP 1 Score: 141.354 bits (355), Expect = 9.588e-35 Identity = 89/292 (30.48%), Postives = 138/292 (47.26%), Query Frame = 0 Query: 1 MRYISTR-YDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGR-------RMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYR 284 M+Y STR Y+PS+ +F + VL G APDGG+++PE+IP + L+SW L++ EL KL F++ + D L ++VD SF++F+ E+ P E ++ SLY ELFHGP+ AFKD+ +Q L NL E +L ++ + ++T + TSGDTG +A ++GK + + +L+P GRVS QEAQM + NV +++EG+ DD + FGD ++ Sbjct: 1 MKYHSTRTYEPSN------LLNFEDTVLTGLAPDGGLYIPEQIPQLDEQTLKSWESLSFQELCKKLFRKFINPSEISDE---------ELSQLVDKSFSTFSHSEIT----------------------------PTVKLAETKDNKSLYCLELFHGPTYAFKDVALQFLGNLFEFFLTRKNQASQSNQHKVTVVGATSGDTGGAAIYGLRGKKNVEVFMLHPEGRVSRLQEAQM-----------------------TQVMDENVHNISIEGAFDDCQNLVKQCFGDAQFK 226
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|589612319|gb|EXI83722.1| (Threonine synthase [Candidatus Accumulibacter sp. BA-94]) HSP 1 Score: 140.198 bits (352), Expect = 1.760e-34 Identity = 96/287 (33.45%), Postives = 145/287 (50.52%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGW 287 MRYISTR P+ ++ SS+R +F E +L G APDGG++LPE P V L WR L+Y +L +LA F+DD +D LR ++ ++ P Y + + +A+S + PL P+ ++ L I EL +GP+LAFKD+ MQ+L NL E+ L + G + L TSGDTG SA A++GK +R+ +L P R+S FQ AQM +L PN+ +A+ G+ DD + ++ D A++ + Sbjct: 1 MRYISTRARPTGTADSSKR-TFSEILLGGLAPDGGLYLPETYPRVGPSELAQWRRLSYADLACAVLARFIDDIPPDD-----------LRTLIHRTYT-------------PAIYRNGRNRSAASEIT-PLRWLEPPA--PERGEGGLAILELSNGPTLAFKDMAMQLLGNLFEYVLARNGEEINILGATSGDTGSSAEYAMRGKRGVRVFMLSPHERMSAFQRAQMY-----------------------SLQDPNIFNIAIRGTFDDAQDIVKAVSNDHAFKSHY 236
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|167526858|ref|XP_001747762.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163773866|gb|EDQ87502.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 142.124 bits (357), Expect = 3.163e-34 Identity = 93/290 (32.07%), Postives = 146/290 (50.34%), Query Frame = 0 Query: 3 YISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQ--EPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEG------RRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYR 284 Y+STR P+S+ SF EAV+AG APDGG+++P +IP V+ + +WR L++P+L +++ F+ QN E+ L +V S+A+F V P + + S A + + L + + Q E S+Y+ E FHGP+ AFKD+ +Q + NL E++L + + +T L TSGDTG +A ++GK + +++L+P GRV+ QEAQM T+ NV VAV+G+ DD + F DP +R Sbjct: 341 YVSTRGGPASA------VSFEEAVMAGLAPDGGLYVPNQIPKVTEETMRAWRRLSFPKLAVEVMGKFIG--------QN-EIPAGTLEALVQRSYATFDSAHVT-------PLIEILTNKVVSLARVLIVSQSLRAAMLSQFSEDGSVYLLEQFHGPTCAFKDVALQFVGNLFEYFLSRRNAQSEKPKHITVLGATSGDTGSAAIFGLRGKANVDVIILHPEGRVAPIQEAQMT-----------------------TVLDDNVHNVAVKGTFDDCQAMVKECFNDPEFR 585
BLAST of EWM28349.1 vs. NCBI_GenBank
Match: gi|502500440|ref|WP_012807312.1| (threonine synthase [Candidatus Accumulibacter phosphatis] >gi|257044677|gb|ACV33865.1| threonine synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]) HSP 1 Score: 139.428 bits (350), Expect = 4.196e-34 Identity = 95/287 (33.10%), Postives = 141/287 (49.13%), Query Frame = 0 Query: 1 MRYISTRYDPSSSSPSSRRYSFREAVLAGWAPDGGMFLPERIPHVSRGVLESWRGLTYPELVTKLLALFMDDGDAEDATQNAEVDKVPLRKIVDASFASFAVPEVVRWKALPWPYLSSSSTTASSSASLPLSCHPLPSFLEKQEPPSLYIAELFHGPSLAFKDLGMQVLTNLLEHYLLQEGRRMTFLVGTSGDTGPSAAAAVQGKVAMRLVVLYPLGRVSTFQEAQMLATHGGVGGSGEKASGAAAEAKAGTLGTPNVRVVAVEGSSDDLDVPIASLFGDPAYRCGW 287 MRYISTR +P S++ SS +F + +L G APDGG++LP+ P VSR L+ WRG+ Y +L +L F+DD +D L ++V ++ + A + +A +S PL P Q L I EL +GP+LAFKD+ MQ+L NL E+ L ++G + L TSGDTG SA A++GK +R+ +L P R+S FQ AQM + H N+ +AV G DD + ++ D A++ + Sbjct: 1 MRYISTRGNPPSTADSSGP-TFCQILLGGLAPDGGLYLPDHYPQVSRTELDQWRGMAYADLAHAVLTKFIDDIPLDD-----------LARLVARTYTAEA--------------YGNGRVSAQASDITPLRWLEPPD--PAQREAGLAILELSNGPTLAFKDMAMQLLGNLFEYVLARQGEEINILGATSGDTGSSAEYALRGKKGVRVFMLSPHERMSAFQRAQMYSLH-----------------------DENIHNIAVRGMFDDAQDIVKAVSNDHAFKARY 236 The following BLAST results are available for this feature:
BLAST of EWM28349.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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