EWM28384.1, cds2285 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|585110762|gb|EWM28384.1| (expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0 Query: 1 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEEATPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV 433 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEEATPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV Sbjct: 1 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEEATPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV 433
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|585110761|gb|EWM28383.1| (expulsion defective family member (exp-2) [Nannochloropsis gaditana] >gi|585110763|gb|EWM28385.1| expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 747.658 bits (1929), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 Query: 1 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEK 358 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEK Sbjct: 1 MNLPSPLFRACIPWTLQEDIDDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEK 358
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|553180960|ref|XP_005853489.1| (expulsion defective family member (exp-2) [Nannochloropsis gaditana CCMP526] >gi|422295571|gb|EKU22870.1| expulsion defective family member (exp-2) [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 474.167 bits (1219), Expect = 9.952e-161 Identity = 270/333 (81.08%), Postives = 271/333 (81.38%), Query Frame = 0 Query: 101 RPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEEATPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV 433 +PHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITR NSGPSLMLLTLFTIVLTFIMGAL VSPFTSVPVSAYWVIITATTVGYG GPGRFVAAASAYCGIVFLSLPIAIV FNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEE TPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV Sbjct: 296 QPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITR----------------------NSGPSLMLLTLFTIVLTFIMGAL------------------------------VSPFTSVPVSAYWVIITATTVGYG------GPGRFVAAASAYCGIVFLSLPIAIV---FNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVRKLTEMREFIRMQMEEVTPIFETMWEEFVAKHLMERLQDHEGEMPRQRGSRSV 567
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|585109280|gb|EWM27103.1| (Ion transport [Nannochloropsis gaditana]) HSP 1 Score: 185.652 bits (470), Expect = 4.153e-49 Identity = 108/334 (32.34%), Postives = 174/334 (52.10%), Query Frame = 0 Query: 27 HTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIY-------WDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYF-DGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFR-RALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQL 351 + R ++F+T +H S AW + ++ I+F++ T+P P+ C+ P+C P P C V+C PR + + EL T+++F DYL+R+ V AVP L++ DGR +D S + P +KT +Y + +ID++ I+P+ YV R+ R R L + KL R F + G ++ TL+ S P+L++ T VL + G++ FY+EGGI+ VT P G F R E SPF S+ YW ++ TT+G +L+PT+ GR + AYCG++ L+LPI I+ + F+ Y+ D ++ L Sbjct: 54 NALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPG-PTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRL--KDRS-NYYRMDPCKKTTKYMLSGLNIIDVISIVPF---YVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYNLVYADPDMQPHL 380
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|585105815|gb|EWM24405.1| (potassium voltage-gated channel subfamily d member 2 [Nannochloropsis gaditana]) HSP 1 Score: 150.599 bits (379), Expect = 1.929e-38 Identity = 87/228 (38.16%), Postives = 119/228 (52.19%), Query Frame = 0 Query: 21 DDWRAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVI--STMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALA 246 DD E R +VF+T H +S A L +M I+C+ FVLSTMPRF P C P+C P P + C IC P L E VT+ +F DY++RL VHAVP+RLI R + +PS L KT + + +IDLL LP+ L + N + RLLR+ RV+R+ +L RY DG +V TL+ S ++ L+ F IVLT A++ Sbjct: 51 DDNYGESNLRRLVFLTLHHPNFSPLARLLSALMGLTIFITCLGFVLSTMPRFQRQPGHCPDPVCLPG-PDSACPESICPPTQIPALFWVEAVTVGIFTIDYVLRLACVHAVPERLINPQHYLHQVGGPRALQEPSGLTKTLSFTIQWMNIIDLLSFLPFYLGLKLDFGEENFVFLRLLRVMRVIRIFRLGRYTDGSTVVRETLRASSAAVGLMAFFMIVLTLFFAAIS 277
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|987509|gb|AAB02603.1| (potassium channel homolog [Polyorchis penicillatus]) HSP 1 Score: 128.257 bits (321), Expect = 7.350e-29 Identity = 68/199 (34.17%), Postives = 110/199 (55.28%), Query Frame = 0 Query: 162 RYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQK 360 ++ ++ +ID L ILPY L+ V+ + + + +LR+ RVLRV KLSR+ G +++ NTLK S LM+L F V+ I G+ +Y E E + F S+P S +W I+T TTVGYGD+HP + G+ V + + CG++ ++LP+ +VV F Y K+ + + EE K++ + KQ+ Sbjct: 250 KFFLNTGNIIDFLSILPYYLSLVLVSSSKGSFSMLRVIRVLRVFKLSRHSRGLQILGNTLKASFNELMMLAFFLFVMILIFGSCVYY---------------------AEYKEPGTKFISIPSSFWWAIVTMTTVGYGDMHPVTFWGQIVGSMAVVCGVLTIALPVPVVVSNFEYFYTKERNRRKTEEARKEQAKSKQE 427
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|88976032|gb|ABD59027.1| (voltage-gated potassium channel [Physalia physalis]) HSP 1 Score: 122.094 bits (305), Expect = 1.012e-26 Identity = 65/222 (29.28%), Postives = 118/222 (53.15%), Query Frame = 0 Query: 162 RYAVHADQVIDLLVILPYLLNYVISTMNIMHWRL--LRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEEPTALSAAEAKWKRKHVR 381 ++ + +IDLL I+PY +++ +S+ + L LR+ RVLRV KLSR+ G +++ +TLK S L++L F +++ + G+ +Y E + E + FTS+P +++W I+T TTVGYGD++PT+ G+ + + CG++ ++LP+ +VV F Y K+ + + EE K+ E++ ++ + RK R Sbjct: 254 KFFTNLSNIIDLLSIVPYYVSFALSSTSKHQGYLAVLRVIRVLRVFKLSRHSRGLQILGDTLKASFHELLMLAFFLLIMILLFGSCVYYAEYQV---------------------EGTKFTSIPAASWWAIVTMTTVGYGDMYPTTLLGKLIGFVAVVCGVLTIALPVPVVVSNFEYFYTKERNRRKTEEVRKEHEKQLEERKSSSNMFRKMICRKSRKKER 454
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|1072232005|gb|OEU16737.1| (voltage-gated potassium channel [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.931 bits (289), Expect = 7.136e-25 Identity = 85/322 (26.40%), Postives = 147/322 (45.65%), Query Frame = 0 Query: 24 RAEHTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDP--------------GAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLIT-VHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALE-GGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAI 329 R ++R +F+ S+ + +Y ++ S + +L TM F YTP C CR G++ + +C PRP+ YL + LI F ++ +R+++ V A P+ I F + + D L I PY + ++ ++ RLLR+ RV + ++L +Y + N L S P L L+ + I G+L F+ E G +K + R + + EE+SPF S+P + +W I+TATTVGYGD +PTS G+++AA + G++ ++ P+++ Sbjct: 5 RHHRSFRRRLFLFLTEPSSSWGSAIYFFILILAIFASNLIIILQTMAYFQYTPVDCG--FCRGESSHDKIYDDDQDQIYNGSDIIQCVCPPRPYPYLERAMDYILIFFAVEWTLRVLSFVPAHPRTDII-----------------GKCNDWFTFLTSMPTMFDALAIWPYFIE-ILHLPGLISLRLLRLFRVFQFVRLGKYNSMFVSLTNVLYKSLPFLRLMIVVLFFGASIFGSLVFWLEQGTWKYWEPTGTFQYIRMSKDLTNEEISPFNSIPCAYWWFIVTATTVGYGDYYPTSTIGQWIAAFAMIAGVLVIAFPVSV 306
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|425892102|gb|AFY09703.1| (potassium channel, partial [Nematostella vectensis]) HSP 1 Score: 114.005 bits (284), Expect = 5.113e-24 Identity = 98/340 (28.82%), Postives = 156/340 (45.88%), Query Frame = 0 Query: 33 VFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICR------PSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVI--STMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKQKAGEE 364 V+ T ++ YS A V +S I F + T+P F P + ++P P DP E Q ++ F +Y++RLI P++L ++ + A +IDLL ILPY + + + +I R++R+ RV RV KLSR+ G +++ NTL+ S LM+L F + I + +Y EGGI SPF S+P S +W ++T TTVGYGD+ P S G+ V A A G++ ++LP+ ++V F Y+K+ + + EEQL+KEEE +++ +E Sbjct: 162 VWETLEYPEYSKLAKFLAIFSVVVIVLSLIIFCVETLPEF--MPQEVTKPKNATADWKPPKDPYEET------------WFQLNTFVIVWFTAEYILRLI---CSPEKL--------------------------KFLLAALNIIDLLSILPYYVQLALDSGSSSISVLRVVRVVRVFRVFKLSRHSRGLQILGNTLRASMNELMMLMFFLFIGVMIFASCVYYAEGGI----------------------DSPFRSIPHSFWWAVVTMTTVGYGDISPESFWGKIVGALCAISGVLTIALPVPVIVSNFENFYNKEINRRK-EEQLRKEEEARRQQEKE 435
BLAST of EWM28384.1 vs. NCBI_GenBank
Match: gi|828218762|ref|XP_012561063.1| (PREDICTED: potassium voltage-gated channel subfamily A member 10-like, partial [Hydra vulgaris]) HSP 1 Score: 107.071 bits (266), Expect = 8.141e-24 Identity = 62/185 (33.51%), Postives = 100/185 (54.05%), Query Frame = 0 Query: 163 YAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAV 347 + ++ +ID L ILP+ L+ +IS+ N +LR+ RV RV KL+R+ G +++ NTLK S LM+L F V+ G+L +Y E + + G + FTS+P S +W I+T TVGYGD+ P + G+ + + + G++ ++LP+ I+V F Y KD + K V Sbjct: 2 FFLNGGNIIDFLSILPFYLSLIISS-NRTETSILRVMRVFRVFKLARHSRGLQILGNTLKASFNELMMLVFFLFVMILFFGSLIYYAE-----------------KDVPG----TTFTSIPDSFWWCIVTMATVGYGDMVPITFWGKLIGSVTIIFGLLLVALPVPIIVSNFEFYYKKDQNRKKV 164 The following BLAST results are available for this feature:
BLAST of EWM28384.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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