EWM28394.1, cds2279 (CDS) Nannochloropsis gaditana

Overview
NameEWM28394.1
Unique Namecds2279
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:35157..35199 +
Alignment locationCM002459.1:35439..35570 +
Alignment locationCM002459.1:35825..35952 +
Alignment locationCM002459.1:36114..36214 +
Alignment locationCM002459.1:36361..36476 +
Alignment locationCM002459.1:36707..36809 +
Alignment locationCM002459.1:36941..37025 +
Alignment locationCM002459.1:37170..37220 +
Alignment locationCM002459.1:37506..37592 +
Alignment locationCM002459.1:37788..37883 +
Alignment locationCM002459.1:38162..38252 +
Alignment locationCM002459.1:38548..38652 +
Alignment locationCM002459.1:38795..38895 +
Alignment locationCM002459.1:38990..39053 +
Alignment locationCM002459.1:39173..39188 +
Alignment locationCM002459.1:39255..39348 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28394.1
Productglycoside hydrolase family 8
Orig transcript idgnl|cribi|Naga_100369g4.2406.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:35157..35199 +
CM002459.1supercontigCM002459.1:35439..35570 +
CM002459.1supercontigCM002459.1:35825..35952 +
CM002459.1supercontigCM002459.1:36114..36214 +
CM002459.1supercontigCM002459.1:36361..36476 +
CM002459.1supercontigCM002459.1:36707..36809 +
CM002459.1supercontigCM002459.1:36941..37025 +
CM002459.1supercontigCM002459.1:37170..37220 +
CM002459.1supercontigCM002459.1:37506..37592 +
CM002459.1supercontigCM002459.1:37788..37883 +
CM002459.1supercontigCM002459.1:38162..38252 +
CM002459.1supercontigCM002459.1:38548..38652 +
CM002459.1supercontigCM002459.1:38795..38895 +
CM002459.1supercontigCM002459.1:38990..39053 +
CM002459.1supercontigCM002459.1:39173..39188 +
CM002459.1supercontigCM002459.1:39255..39348 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
IPR0123416hp_glycosidase
IPR002037Glyco_hydro_8
Homology
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|585110777|gb|EWM28394.1| (glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 980.704 bits (2534), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query:    1 MRLQTLPATVLLTAAVLGVTESVAQQSLRGMTATPANKAGGKYKPFFLPYSNTSGIPRVDADYHDSLKATWEGLKARNIDPYDIKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTMEGEPVPMTDFWDFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISGQEHDKQFNKLMEILKYAKKYNTCTCRGPAW 470
            MRLQTLPATVLLTAAVLGVTESVAQQSLRGMTATPANKAGGKYKPFFLPYSNTSGIPRVDADYHDSLKATWEGLKARNIDPYDIKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTMEGEPVPMTDFWDFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISGQEHDKQFNKLMEILKYAKKYNTCTCRGPAW
Sbjct:    1 MRLQTLPATVLLTAAVLGVTESVAQQSLRGMTATPANKAGGKYKPFFLPYSNTSGIPRVDADYHDSLKATWEGLKARNIDPYDIKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTMEGEPVPMTDFWDFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISGQEHDKQFNKLMEILKYAKKYNTCTCRGPAW 470          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1213239225|ref|WP_088639869.1| (hypothetical protein [Fibrobacter sp. UWB4] >gi|1212428410|gb|OWV20495.1| hypothetical protein B7990_04860 [Fibrobacter sp. UWB4])

HSP 1 Score: 418.698 bits (1075), Expect = 6.256e-139
Identity = 216/396 (54.55%), Postives = 275/396 (69.44%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYDIK--LVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFY-YQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESK-PYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VD  Y + +L +TW+GL  RNI PY     L+HRP+SETP DAVSEGVGYG+L++LY+NDQ  FN   + A   MW    +++W++N +G I GTGAA+DAEED+AL  IFA  LV  G W+P+T+ K G+ Y   AQ+ILD MW    +     LAP AGWGG  FVNPGYF+PAWYKIFA+FD+N DR  W  VVD+SYE I  + G   G++PDWMTP G +    GLGYNAY + R F+KDAIR  WR+A DA+WF++ERAK FL  A TF+  KGG K ANF+ +E  GE +P  D W DF+N++ +   R+R EHSHLT+GMWAT   +A G KE +  +S+E+  FYEGGD++G   D +G  ED  HNEMYFDQFLAWFG S +SG
Sbjct:   29 PKVDEAYWNKALDSTWQGLIRRNIQPYSAGAGLIHRPKSETPGDAVSEGVGYGMLVSLYANDQASFNKIWEEANSSMWG-GCYYNWQMNPEGKISGTGAASDAEEDVALTLIFADKLVSAGKWQPYTSAKLGSDYKTHAQKILDCMWSSKQVTSDGILAPGAGWGGYSFVNPGYFSPAWYKIFAKFDSNGDR--WNTVVDKSYEIISKSPGYSMGMVPDWMTPEGGWVGSAGLGYNAYFESRAFFKDAIRILWRVAIDAIWFDEERAKAFLKNALTFINSKGGAKAANFYQIENAGELLPADDKWFDFNNSKDKTTWRYRSEHSHLTIGMWATAA-MAVGEKEDRIAFSEEMGKFYEGGDFFGKSRDESGALEDTLHNEMYFDQFLAWFGTSMMSG 420          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1120109122|ref|WP_072979625.1| (hypothetical protein [Fibrobacter sp. UWH4] >gi|1109957957|emb|SHL40713.1| Por secretion system C-terminal sorting domain-containing protein [Fibrobacter sp. UWH4])

HSP 1 Score: 414.461 bits (1064), Expect = 2.022e-137
Identity = 213/394 (54.06%), Postives = 271/394 (68.78%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYDIK--LVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VDA Y   +L +TW+GL  RNIDPY     L+HRP+SETP DAVSE VGYG+L+ALY+NDQ++FN   D A   MW    +++W++   G+I G GAATDAEED+ALA IFA  LV  G W+P+T+ K    Y + AQ+ILD MW    I     LAP AGWGG DFVNPGYF+PAWY+IFA+FD+N DR  W  VV+++YE +  + G   G++PDWM P G  +   LGYNAY + R F+KDAIR  WR+A DA+WF++ RAK FL  A +F+  KGG K ANF+ +E  GE +P  D W DF++++ +   R+R EHSHLT+GMWAT    A    +   +S+EL  FYEGGDY+G   DP GG ED  HNEMYFDQFLAWFGAS +SG
Sbjct:   29 PKVDASYWKAALDSTWQGLIRRNIDPYSEGEGLIHRPKSETPGDAVSEAVGYGMLVALYANDQDHFNSIWDAANEKMWG-GCYYNWQMAPNGNISGRGAATDAEEDVALALIFADKLVSAGKWKPYTSTKFNYGYAEHAQKILDCMWSTEQITGNGILAPGAGWGGDDFVNPGYFSPAWYRIFAKFDSNGDR--WNTVVEKTYEILANSPGYSMGMVPDWMRPDGG-WAGSLGYNAYFNSRAFFKDAIRILWRVAIDAVWFDEPRAKAFLKNAVSFINTKGGAKAANFYQIENAGELLPAEDIWTDFNDSKNKDTWRYRSEHSHLTIGMWATAAVAAGESADRIAFSEELAKFYEGGDYFGVAKDPTGGIEDTLHNEMYFDQFLAWFGASMMSG 418          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1213213110|ref|WP_088629075.1| (hypothetical protein [Fibrobacter sp. UWB3] >gi|1212430875|gb|OWV22638.1| hypothetical protein B7991_00215 [Fibrobacter sp. UWB3])

HSP 1 Score: 413.69 bits (1062), Expect = 5.596e-137
Identity = 210/395 (53.16%), Postives = 268/395 (67.85%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYDIK--LVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFY-YQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VDA Y + +L +TW+GL  RNI PY     L+HRP+SETP DAVSEGVGYG+L++LY+NDQ  FN   + A   MW+   +++W++   G I G GAA+DAEED+ALA IFA  LV  G W+P+T+ K G+ Y   AQ+ILD MW    I     LAP AGWGG +FVNPGYF+PAWYK+FA+FD+N DR  W  VVD+SYE I  + G   G++PDWMTP G +    GLGYNAY + R F+KDAIR  WR+A DA+WF+++RAK FL  A TF+  KGG K ANF+ +E  GE +P  D W DF+N++     R+R EHSHLT+GMWAT         +   +S+E+  FYEGGDY+G   +     ED  HNEMYFDQFLAWFG S +SG
Sbjct:   29 PKVDAAYWNKALDSTWQGLVRRNIQPYSAGAGLIHRPKSETPGDAVSEGVGYGMLVSLYANDQASFNKMWEQANTLMWS-SCYYNWQMGPDGKITGLGAASDAEEDVALALIFADKLVSAGKWQPYTSAKLGSDYKAHAQKILDCMWSSKQITSNGILAPGAGWGGYEFVNPGYFSPAWYKVFAKFDSNGDR--WNTVVDKSYEIIALSPGYSMGMVPDWMTPEGGWVGSAGLGYNAYFESRAFFKDAIRILWRVAIDAIWFDEQRAKTFLKNALTFINSKGGAKAANFYQIENAGELLPAEDKWYDFNNSKDSTTWRYRSEHSHLTIGMWATVAMAVGEKADRIAFSEEMGKFYEGGDYFGLAKNETDALEDTLHNEMYFDQFLAWFGTSMMSG 420          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1119916724|ref|WP_072800055.1| (hypothetical protein [Fibrobacter sp. UWT2] >gi|1109917764|emb|SHL15120.1| Por secretion system C-terminal sorting domain-containing protein [Fibrobacter sp. UWT2])

HSP 1 Score: 412.149 bits (1058), Expect = 1.751e-136
Identity = 207/394 (52.54%), Postives = 264/394 (67.01%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYDIK--LVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW----DFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VD  Y   +L +TW+GL  RNIDPY     L+HRP+SETP DAVSE VGYG+L+ALY+NDQE+FN   + A   MW+   +++W++   G I G GAATDAEED+AL+ IFA  LV  GVW+P+T+ K    Y   A+ ILD MW    +     LAP AGWGG  FVNPGYF+PAWYKIFA+FD+N DR  W  VV+++YE +  + G   G+IPDWM P G  +   LGYNAY + R F+KDAIR  WR+A DA+WF++ RAK+FL  +  F+  KGG   +NF+ +E  GE +P  D W    D +N    R+R EHSHLT+GMWAT         +   +S+EL  FYEGGDY+G+ +DP GG ED  HNEMYFDQFLAWFGAS +SG
Sbjct:   29 PKVDESYWKAALDSTWQGLVRRNIDPYSAGKGLIHRPKSETPGDAVSEAVGYGMLVALYANDQEHFNSIWEAANETMWS-TCYYNWQMGPDGKIAGGGAATDAEEDVALSLIFADKLVSAGVWKPYTSTKFNYGYADHAKTILDCMWSTKQVTSSGILAPGAGWGGESFVNPGYFSPAWYKIFAKFDSNGDR--WNKVVEKTYEILSKSPGYSMGMIPDWMQPDGG-WAGSLGYNAYFNSRAFFKDAIRILWRVAIDAVWFDESRAKDFLKNSLAFINSKGGAAASNFYQIENAGELLPADDIWTDFNDSENENTWRYRREHSHLTIGMWATAALAVGESADRIAFSEELGKFYEGGDYFGNAVDPTGGIEDTLHNEMYFDQFLAWFGASMLSG 418          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1120567248|ref|WP_073424101.1| (hypothetical protein [Fibrobacter sp. UWB7] >gi|1109981412|emb|SHM43856.1| Por secretion system C-terminal sorting domain-containing protein [Fibrobacter sp. UWB7])

HSP 1 Score: 411.379 bits (1056), Expect = 4.950e-136
Identity = 215/396 (54.29%), Postives = 272/396 (68.69%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYD--IKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFY-YQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESK-PYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VD  Y + +L +TW+GL  RNI PY   + L+HRP+SE P DAVSEGVGYG+L++LY+NDQ  FN   D A   MW    +++W+++ +G I G GAA+DAEEDIALA IFA  LV  G W+P+T+ K G  Y   AQ+ILD MW    I     LAP AGWGG DFVNPGYF+PAWYK+FA+FD+N DR  W  VVD+SYE I  + G   G++PDWMTP G +    GLGYNAY + + F+KDAIR  WR+A DA+WF++ERAK FL  A TF+  KGG K ANF+ +E  GE +P  D W DF+N++     R+R EHSHLT+GMWAT   +A G KE +  +S+E+  FYEGGDY+G   +     ED  HNEMYFDQFLAWFG S +SG
Sbjct:   29 PKVDESYWNKALDSTWQGLIRRNIQPYSAGVGLIHRPKSEAPGDAVSEGVGYGMLVSLYANDQASFNKMWDEANSSMWG-GCYYNWQMSVEGKIVGRGAASDAEEDIALALIFADKLVSAGKWQPYTSTKFGYDYKSHAQKILDCMWSTEQITSNGILAPGAGWGGYDFVNPGYFSPAWYKVFAKFDSNGDR--WNKVVDKSYEIISKSPGYSMGMVPDWMTPDGGWVGSAGLGYNAYFESKAFFKDAIRILWRVAIDAIWFDEERAKTFLKNALTFINSKGGAKAANFYQIEKAGELLPPEDKWYDFNNSKDTTTWRYRSEHSHLTIGMWATAA-MAVGEKEDRIAFSEEMGKFYEGGDYFGLAKNETDALEDTLHNEMYFDQFLAWFGTSMMSG 420          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1188369188|ref|WP_085490467.1| (hypothetical protein [Fibrobacter sp. UWB13] >gi|1183531790|emb|SMG15046.1| Por secretion system C-terminal sorting domain-containing protein [Fibrobacter sp. UWB13])

HSP 1 Score: 411.379 bits (1056), Expect = 5.004e-136
Identity = 215/396 (54.29%), Postives = 272/396 (68.69%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYD--IKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFY-YQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESK-PYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VD  Y + +L +TW+GL  RNI PY   + L+HRP+SE P DAVSEGVGYG+L++LY+NDQ  FN   D A   MW    +++W+++ +G I G GAA+DAEEDIALA IFA  LV  G W+P+T+ K G  Y   AQ+ILD MW    I     LAP AGWGG DFVNPGYF+PAWYK+FA+FD+N DR  W  VVD+SYE I  + G   G++PDWMTP G +    GLGYNAY + + F+KDAIR  WR+A DA+WF++ERAK FL  A TF+  KGG K ANF+ +E  GE +P  D W DF+N++     R+R EHSHLT+GMWAT   +A G KE +  +S+E+  FYEGGDY+G   +     ED  HNEMYFDQFLAWFG S +SG
Sbjct:   29 PKVDESYWNKALDSTWQGLIRRNIQPYSAGVGLIHRPKSEAPGDAVSEGVGYGMLVSLYANDQASFNKMWDEANSSMWG-GCYYNWQMSVEGKIVGRGAASDAEEDIALALIFADKLVSAGKWQPYTSTKFGYDYKSHAQKILDCMWSTEQITSNGILAPGAGWGGYDFVNPGYFSPAWYKVFAKFDSNGDR--WNKVVDKSYEIISKSPGYSMGMVPDWMTPDGGWVGSAGLGYNAYFESKAFFKDAIRILWRVAIDAIWFDEERAKTFLKNALTFINSKGGAKAANFYQIEKAGELLPPEDKWYDFNNSKDTTTWRYRSEHSHLTIGMWATAA-MAVGEKEDRIAFSEEMGKFYEGGDYFGLAKNETDALEDTLHNEMYFDQFLAWFGTSMMSG 420          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1213235014|ref|WP_088636528.1| (hypothetical protein [Fibrobacter sp. UWR2] >gi|1212408326|gb|OWV01743.1| hypothetical protein B7994_00480 [Fibrobacter sp. UWR2])

HSP 1 Score: 402.519 bits (1033), Expect = 9.843e-133
Identity = 208/394 (52.79%), Postives = 265/394 (67.26%), Query Frame = 0
Query:   57 PRVDADY-HDSLKATWEGLKARNIDPYD--IKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPK-GASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTME--GEPVPMTDFW-DFDNNQRR---RHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            P+VD  Y   +L +TW+GL  RNI+PY     L+HRP+SETP DAVSE VGYG+L+AL++NDQ++FN   D A   MW    +++W++   G I G GAATDAEED+ALA IFA  LV  G W+P+T+ K    Y   A++IL  MW    I     LAP AGWGG  FVNPGYF+PAWY+IFA+FD+N DR  W  VV+++YE +  + G   G+IPDWM P G  +   LGYNAY + R F+KDAIR  WRLA DA+WF++ RAK FL  + TF+ GKGGP+ ANF+ +E  GE +P  D W DF+N++     R+R EHSHLT+GMWAT        ++   +S+EL  FYEGGDY+G   D  G  ED  HNEMYFDQFLAWFGAS +SG
Sbjct:   29 PKVDESYWKAALDSTWQGLIRRNINPYSEGKGLIHRPKSETPGDAVSEAVGYGMLVALFANDQDHFNSIWDAANDKMWG-GCYYNWQMAPSGMISGEGAATDAEEDVALALIFADKLVSAGKWQPYTSTKFNYGYADHAKKILGCMWGTQQITSSGILAPGAGWGGDSFVNPGYFSPAWYRIFAKFDSNGDR--WNKVVEKTYEILSKSPGYSMGMIPDWMRPDGG-WAGSLGYNAYFNSRAFFKDAIRILWRLAIDAVWFDESRAKAFLENSLTFINGKGGPEAANFYQIENPGELLPAEDIWTDFNNSKDTSTWRYRREHSHLTIGMWATAAVAVGKSEDRIAFSEELAKFYEGGDYFGLAKDTTGALEDTLHNEMYFDQFLAWFGASMMSG 418          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1120361095|ref|WP_073225200.1| (hypothetical protein [Fibrobacter sp. UWEL] >gi|1109942460|emb|SHK46896.1| Glycosyl hydrolases family 8 [Fibrobacter sp. UWEL])

HSP 1 Score: 374.015 bits (959), Expect = 9.803e-122
Identity = 199/418 (47.61%), Postives = 262/418 (62.68%), Query Frame = 0
Query:   31 MTATPANKAGGKYKPF-FLPYSNTSGIPRVDADY-HDSLKATWEGLKARNIDPYD----IKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTMEGEPVPMTDFW-DFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEG-GDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
            +TA      G    PF  +   NT   P+VDA + +  L  TW GLK RNI+PY+      L+HRP+SE P DAVSE VGYG+L+ALY+NDQE FN   + A + MWN  +++DW++   GS +  GAATDAEEDI ++ +FA  LV  G W+  TT  G  Y   A++++  MW+   I     LAP AGWGG +FVN GYF+PAWYKIFA++D+N   HDW  VVD+SYE I  + G   G++PDWM P G+     LGYNAY + + F+KDAIR  WR+A DA+WF++ RAK FL  +  F+   GG + ANFF M+G+ +P  D W D       RHR EHS LT+GMWAT         + K +S E+  FY+   DY+G  +DP+G  ED  HNEMYF+QFL WFG S ++G
Sbjct:    6 LTAAIFAICGAISTPFAVMDIPNTQ--PKVDASFWNQVLDKTWSGLKKRNIEPYENGVGAGLIHRPKSEYPGDAVSEAVGYGMLVALYANDQETFNKIWEAANKNMWN-GSYYDWQLKLSGS-KSEGAATDAEEDIIMSLVFADKLVQAGKWQDFTTSDGRKYLDHAKKMMGKMWETSQITSQGTLAPGAGWGGENFVNVGYFSPAWYKIFAKYDSN---HDWNKVVDRSYEIIGNSPGYALGMVPDWMKPDGS-PSGSLGYNAYFNAKAFFKDAIRILWRVAIDAIWFDEPRAKSFLQNSMKFINSIGGAEAANFFQMDGQLLPAEDVWEDMLAGTITRHRREHSPLTIGMWATAAMAVGTDDDKKAFSMEMAKFYDKDADYFGLAVDPSGAEEDTLHNEMYFEQFLGWFGTSLMTG 415          
BLAST of EWM28394.1 vs. NCBI_GenBank
Match: gi|1088015874|gb|OGY87773.1| (hypothetical protein A2319_05020 [Candidatus Kerfeldbacteria bacterium RIFOXYB2_FULL_38_14])

HSP 1 Score: 181.8 bits (460), Expect = 3.865e-48
Identity = 131/393 (33.33%), Postives = 188/393 (47.84%), Query Frame = 0
Query:   61 ADYHDSLKATWEGLKARNIDPYD----IKLVHRPRSETPND------AVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNW-RNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTM-EGEPVPMTDFWDFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESK-PYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440
             D+ +     WE  K   I+ Y       LV    S TP+       AVSEG GYGLLLA    DQ+ F+  L  A+++MW   R  + W+    GS   T AATD +EDIA+A + A  L   G W  +T     +Y KRAQEI+ ++++   + +  +L P       D +N  YFAPAWYK+FA +D     HDW+ V+D+ Y+ +LA      GLIPDW T  G   Y    +N   D       AIR  WRLA D++W ND RA+E+L     ++  K G K+   +++ EG P+     W             H+ LT+ +W+   + +  P + K     E  SFY       + +D +           YF+Q L+   A+TI G
Sbjct:   26 VDFSEERNGAWETFKQITIEGYKNYPAYGLVFDSASCTPDSNAACDYAVSEGQGYGLLLAAIQKDQKTFDQILTAADKWMWQADRRGYGWKTYTDGSTPDTNAATDGDEDIAMALLLADKLQASGQWNKNT-----AYQKRAQEIIASIYETMTLNN--YLCPGNYTCTPDELNFSYFAPAWYKVFAVYDP---AHDWRGVIDKQYDLLLAVAKKFNGLIPDWCTENGDVTYNNRPHNMTYD-------AIRVPWRLALDSIWNNDPRAQEYLNLVMPYVLAKSGAKDIKMYSIPEGNPLE----W-------------HNELTVALWSAGAWGSNLPADQKNALVQEFRSFY-------NPVDQSFNATWAPAKWYYFNQALSLLAAATIDG 377          
The following BLAST results are available for this feature:
BLAST of EWM28394.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110777|gb|EWM28394.1|0.000e+0100.00glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
gi|1213239225|ref|WP_088639869.1|6.256e-13954.55hypothetical protein [Fibrobacter sp. UWB4] >gi|12... [more]
gi|1120109122|ref|WP_072979625.1|2.022e-13754.06hypothetical protein [Fibrobacter sp. UWH4] >gi|11... [more]
gi|1213213110|ref|WP_088629075.1|5.596e-13753.16hypothetical protein [Fibrobacter sp. UWB3] >gi|12... [more]
gi|1119916724|ref|WP_072800055.1|1.751e-13652.54hypothetical protein [Fibrobacter sp. UWT2] >gi|11... [more]
gi|1120567248|ref|WP_073424101.1|4.950e-13654.29hypothetical protein [Fibrobacter sp. UWB7] >gi|11... [more]
gi|1188369188|ref|WP_085490467.1|5.004e-13654.29hypothetical protein [Fibrobacter sp. UWB13] >gi|1... [more]
gi|1213235014|ref|WP_088636528.1|9.843e-13352.79hypothetical protein [Fibrobacter sp. UWR2] >gi|12... [more]
gi|1120361095|ref|WP_073225200.1|9.803e-12247.61hypothetical protein [Fibrobacter sp. UWEL] >gi|11... [more]
gi|1088015874|gb|OGY87773.1|3.865e-4833.33hypothetical protein A2319_05020 [Candidatus Kerfe... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2287rna2287Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications