EWM28400.1, cds2277 (CDS) Nannochloropsis gaditana

Overview
NameEWM28400.1
Unique Namecds2277
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:26268..26273 -
Alignment locationCM002459.1:25955..26101 -
Alignment locationCM002459.1:25568..25720 -
Alignment locationCM002459.1:25158..25373 -
Alignment locationCM002459.1:24813..24944 -
Alignment locationCM002459.1:24494..24655 -
Alignment locationCM002459.1:24145..24265 -
Alignment locationCM002459.1:23803..23894 -
Alignment locationCM002459.1:23268..23530 -
Alignment locationCM002459.1:22804..23104 -
Alignment locationCM002459.1:22606..22705 -
Alignment locationCM002459.1:22454..22536 -
Alignment locationCM002459.1:21895..22020 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28400.1
Productputative inositol polyphosphate-5-phosphatase inp51p
Orig transcript idgnl|cribi|Naga_100206g1.1432.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:26268..26273 -
CM002459.1supercontigCM002459.1:25955..26101 -
CM002459.1supercontigCM002459.1:25568..25720 -
CM002459.1supercontigCM002459.1:25158..25373 -
CM002459.1supercontigCM002459.1:24813..24944 -
CM002459.1supercontigCM002459.1:24494..24655 -
CM002459.1supercontigCM002459.1:24145..24265 -
CM002459.1supercontigCM002459.1:23803..23894 -
CM002459.1supercontigCM002459.1:23268..23530 -
CM002459.1supercontigCM002459.1:22804..23104 -
CM002459.1supercontigCM002459.1:22606..22705 -
CM002459.1supercontigCM002459.1:22454..22536 -
CM002459.1supercontigCM002459.1:21895..22020 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585110784|gb|EWM28400.1| (putative inositol polyphosphate-5-phosphatase inp51p [Nannochloropsis gaditana])

HSP 1 Score: 1298.88 bits (3360), Expect = 0.000e+0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL 633
            MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL
Sbjct:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL 633          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585111920|gb|EWM29391.1| (phosphatidylinositol- -trisphosphate 5-phosphatase 2 [Nannochloropsis gaditana])

HSP 1 Score: 234.187 bits (596), Expect = 2.894e-62
Identity = 145/414 (35.02%), Postives = 210/414 (50.72%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKD------------LAAREDTEGPVGTTVNVMHPNCK------------ANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSR-GREVGQGVMCLRQAFPTSVRSSSSSSF 389
            ++ G+ F+ F EG + FPPSFRWRRG  AGDF+D +R+A +YVL KKGDG+RVPSYTDRILFHSL+DVR  L L+AY +C+ + GSDHRPVSAAF+L +N++ IGF                  R+  P                       E G   P TP          ++Y  AS W V+LS A Y P +D            ++  ++   P  ++     P+ +            A A W +T++FP +LEDPFA D K++ L++A+ E   ++ + R          RD +R+                             +D+  +            R H+ +WG+++  +G +F VLVLPEVSRHAL+R+ + R G EVGQGV+CLRQAF  ++ + +S+S 
Sbjct:  813 IRTGQAFADFREGPLTFPPSFRWRRGGCAGDFSDAKRMADAYVLVKKGDGERVPSYTDRILFHSLSDVRCYLRLIAYRMCEHVRGSDHRPVSAAFQLTVNRRRIGF------------------RLDSP-----------------------EAGTVSPETP----------MDYAGASTWRVQLSRARYTPYRDQPSLAQGDPPRNVSTFKERASPCSSSHPTGTPSVRIKGTSSSKLVIGAEAGWKVTVYFPCVLEDPFAADAKIQDLEKALLEEEDDSGIRR---------VRDQIRRA----------------------------LDSRGM-----------QRCHRVDWGELASSQGLTFDVLVLPEVSRHALVRIVEPRTGVEVGQGVICLRQAFVNTLPAGTSASL 1127          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|553184011|ref|XP_005854011.1| (inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526] >gi|422295049|gb|EKU22348.1| inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 119.013 bits (297), Expect = 2.367e-24
Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLH----KKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSL 112
            M+ G +  GF E  I FPPSFRW  GA AGDFT    L   + L     K G   R PSYTDRILFH+L DV   + +  Y++CDA+TGSDHRPV    +L+LN  +IGF T+P +
Sbjct:  403 METGDLLFGFHEAPIRFPPSFRWVSGASAGDFTQLSLLEKCFTLKAFSKKSGWTPRPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFNTVPQV 518          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585109654|gb|EWM27419.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 117.857 bits (294), Expect = 1.197e-23
Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLH----KKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSL 112
            M+ G +  GF E  I FPPSFRW  GA AGDFT    L   + L     K G   R PSYTDRILFH+L DV   + +  Y++CDA+TGSDHRPV    +L+LN  +IGF T+P +
Sbjct:  913 METGDLLFGFHEAPIRFPPSFRWVSGASAGDFTQLSLLEKCFTLKAFSKKSGWTPRPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFNTVPQV 1028          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|695427485|ref|XP_009529708.1| (hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae] >gi|348676141|gb|EGZ15959.1| hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae])

HSP 1 Score: 98.2117 bits (243), Expect = 1.729e-17
Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKG-----DSSSTLPVSGRMQGPR---------GYPAVSSLGVEGEEGEREEGKEEGGRQIPTT 161
            M+ G++F GF E +IAFPP+FR  RGA     AG++  EE LA  Y    +G G RVPSYTDRILF S  D+R  L   AY  C+ ++ SDH+PV A F+  +N+ ++   T  + K      D S  L    R+              +P ++S+G   +  +R    +  G Q+  T
Sbjct:  666 MRDGQIFYGFREAKIAFPPTFRRVRGAALNLDAGNWPVEE-LAGCYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAAYASCEEVSCSDHKPVLAVFQALVNRDILPIETELATKKLQRMQDVSGVLECQLRLDFSNISWQPDTEADFP-LTSIGSSIDMDQRFSSFDRHGHQVMVT 842          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|301122413|ref|XP_002908933.1| (transmembrane protein, putative [Phytophthora infestans T30-4] >gi|262099695|gb|EEY57747.1| transmembrane protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 92.8189 bits (229), Expect = 7.105e-16
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    2 KAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRL 99
            ++ ++F GF E EI F P+FR  RG    D  D      +Y L     G RVPSYTDRIL+ SLA +R SL  ++Y+ C+A+T SDH+PVSA FE+ L
Sbjct:  800 RSQQLFHGFQESEITFFPTFRRIRGQALRDPLDAISFQQNYSLVATHGGYRVPSYTDRILYSSLAGMRDSLRCLSYDSCEAVTSSDHKPVSACFEVAL 897          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|570328801|gb|ETO76749.1| (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 92.4337 bits (228), Expect = 7.310e-16
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
            M+ G++F GF E +IAFPP+FR  RG      AG++  EE L+  Y    +G G RVPSYTDRILF S  D+R  L    Y  C+ +  SDH+PV A F+  +N+  +   T
Sbjct:  394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|566025131|gb|ETI48042.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567962440|gb|ETK87965.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567991193|gb|ETL41407.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568050849|gb|ETM47777.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570952542|gb|ETP17799.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 92.4337 bits (228), Expect = 7.504e-16
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
            M+ G++F GF E +IAFPP+FR  RG      AG++  EE L+  Y    +G G RVPSYTDRILF S  D+R  L    Y  C+ +  SDH+PV A F+  +N+  +   T
Sbjct:  394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|568020417|gb|ETL94546.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 92.4337 bits (228), Expect = 7.977e-16
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
            M+ G++F GF E +IAFPP+FR  RG      AG++  EE L+  Y    +G G RVPSYTDRILF S  D+R  L    Y  C+ +  SDH+PV A F+  +N+  +   T
Sbjct:  394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504          
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|675191345|ref|XP_008904557.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568095352|gb|ETN10120.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 92.4337 bits (228), Expect = 8.522e-16
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:    1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
            M+ G++F GF E +IAFPP+FR  RG      AG++  EE L+  Y    +G G RVPSYTDRILF S  D+R  L    Y  C+ +  SDH+PV A F+  +N+  +   T
Sbjct:  422 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 532          
The following BLAST results are available for this feature:
BLAST of EWM28400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110784|gb|EWM28400.1|0.000e+0100.00putative inositol polyphosphate-5-phosphatase inp5... [more]
gi|585111920|gb|EWM29391.1|2.894e-6235.02phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
gi|553184011|ref|XP_005854011.1|2.367e-2450.00inositol polyphosphate 5-phosphatase ocrl-1 [Nanno... [more]
gi|585109654|gb|EWM27419.1|1.197e-2350.00type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
gi|695427485|ref|XP_009529708.1|1.729e-1735.75hypothetical protein PHYSODRAFT_561669 [Phytophtho... [more]
gi|301122413|ref|XP_002908933.1|7.105e-1647.96transmembrane protein, putative [Phytophthora infe... [more]
gi|570328801|gb|ETO76749.1|7.310e-1643.75hypothetical protein, variant [Phytophthora parasi... [more]
gi|566025131|gb|ETI48042.1|7.504e-1643.75hypothetical protein, variant [Phytophthora parasi... [more]
gi|568020417|gb|ETL94546.1|7.977e-1643.75hypothetical protein, variant [Phytophthora parasi... [more]
gi|675191345|ref|XP_008904557.1|8.522e-1643.75hypothetical protein, variant [Phytophthora parasi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2285rna2285Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications