EWM28400.1, cds2277 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585110784|gb|EWM28400.1| (putative inositol polyphosphate-5-phosphatase inp51p [Nannochloropsis gaditana]) HSP 1 Score: 1298.88 bits (3360), Expect = 0.000e+0 Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL 633
MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL
Sbjct: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKDLAAREDTEGPVGTTVNVMHPNCKANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSRGREVGQGVMCLRQAFPTSVRSSSSSSFSLSEGGKEEDGGVMGAPVQALRRLVGGDREKEKKRRKGGEKRLEVPLSLGGRAAGVLRLSIRIHKRDYEYNMAEQQKGKEEKGRHENGEQSRNPWKSMAAAVGGWWHGEKRAQQGWNEDEGEQKEKETGVESDSPRATPDAAGERIRKGKAETQENSAPEFTGVDGNLRFLNLHGLIHVRPIAHFVRVVVHDFCKQITNPDSDEAFQQALCVFEAWIIFPKASWSSVAGGRGSKLCHKIAHFLL 633
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585111920|gb|EWM29391.1| (phosphatidylinositol- -trisphosphate 5-phosphatase 2 [Nannochloropsis gaditana]) HSP 1 Score: 234.187 bits (596), Expect = 2.894e-62 Identity = 145/414 (35.02%), Postives = 210/414 (50.72%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKGDSSSTLPVSGRMQGPRGYPAVSSLGVEGEEGEREEGKEEGGRQIPTTPAPFLGAITPAIEYPTASVWSVRLSNASYDPIKD------------LAAREDTEGPVGTTVNVMHPNCK------------ANADWTLTIHFPSLLEDPFAHDRKMRLLQEAMDEGGREATVSRETLKSLLQTPRDHLRQQQLQLQRGLSLTLPPPQWDAKCRASGGSIIDAAALGTAFGQAAALTTRAHQAEWGQVSQPEGTSFKVLVLPEVSRHALIRVTDSR-GREVGQGVMCLRQAFPTSVRSSSSSSF 389
++ G+ F+ F EG + FPPSFRWRRG AGDF+D +R+A +YVL KKGDG+RVPSYTDRILFHSL+DVR L L+AY +C+ + GSDHRPVSAAF+L +N++ IGF R+ P E G P TP ++Y AS W V+LS A Y P +D ++ ++ P ++ P+ + A A W +T++FP +LEDPFA D K++ L++A+ E ++ + R RD +R+ +D+ + R H+ +WG+++ +G +F VLVLPEVSRHAL+R+ + R G EVGQGV+CLRQAF ++ + +S+S
Sbjct: 813 IRTGQAFADFREGPLTFPPSFRWRRGGCAGDFSDAKRMADAYVLVKKGDGERVPSYTDRILFHSLSDVRCYLRLIAYRMCEHVRGSDHRPVSAAFQLTVNRRRIGF------------------RLDSP-----------------------EAGTVSPETP----------MDYAGASTWRVQLSRARYTPYRDQPSLAQGDPPRNVSTFKERASPCSSSHPTGTPSVRIKGTSSSKLVIGAEAGWKVTVYFPCVLEDPFAADAKIQDLEKALLEEEDDSGIRR---------VRDQIRRA----------------------------LDSRGM-----------QRCHRVDWGELASSQGLTFDVLVLPEVSRHALVRIVEPRTGVEVGQGVICLRQAFVNTLPAGTSASL 1127
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|553184011|ref|XP_005854011.1| (inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526] >gi|422295049|gb|EKU22348.1| inositol polyphosphate 5-phosphatase ocrl-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 119.013 bits (297), Expect = 2.367e-24 Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLH----KKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSL 112
M+ G + GF E I FPPSFRW GA AGDFT L + L K G R PSYTDRILFH+L DV + + Y++CDA+TGSDHRPV +L+LN +IGF T+P +
Sbjct: 403 METGDLLFGFHEAPIRFPPSFRWVSGASAGDFTQLSLLEKCFTLKAFSKKSGWTPRPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFNTVPQV 518
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|585109654|gb|EWM27419.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 117.857 bits (294), Expect = 1.197e-23 Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLH----KKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSL 112
M+ G + GF E I FPPSFRW GA AGDFT L + L K G R PSYTDRILFH+L DV + + Y++CDA+TGSDHRPV +L+LN +IGF T+P +
Sbjct: 913 METGDLLFGFHEAPIRFPPSFRWVSGASAGDFTQLSLLEKCFTLKAFSKKSGWTPRPPSYTDRILFHALPDVGPRVFIQGYDMCDAITGSDHRPVVCRVDLKLNTDIIGFNTVPQV 1028
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|695427485|ref|XP_009529708.1| (hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae] >gi|348676141|gb|EGZ15959.1| hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae]) HSP 1 Score: 98.2117 bits (243), Expect = 1.729e-17 Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRTMPSLKG-----DSSSTLPVSGRMQGPR---------GYPAVSSLGVEGEEGEREEGKEEGGRQIPTT 161
M+ G++F GF E +IAFPP+FR RGA AG++ EE LA Y +G G RVPSYTDRILF S D+R L AY C+ ++ SDH+PV A F+ +N+ ++ T + K D S L R+ +P ++S+G + +R + G Q+ T
Sbjct: 666 MRDGQIFYGFREAKIAFPPTFRRVRGAALNLDAGNWPVEE-LAGCYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAAYASCEEVSCSDHKPVLAVFQALVNRDILPIETELATKKLQRMQDVSGVLECQLRLDFSNISWQPDTEADFP-LTSIGSSIDMDQRFSSFDRHGHQVMVT 842
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|301122413|ref|XP_002908933.1| (transmembrane protein, putative [Phytophthora infestans T30-4] >gi|262099695|gb|EEY57747.1| transmembrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 92.8189 bits (229), Expect = 7.105e-16 Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 2 KAGRVFSGFSEGEIAFPPSFRWRRGAIAGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRL 99
++ ++F GF E EI F P+FR RG D D +Y L G RVPSYTDRIL+ SLA +R SL ++Y+ C+A+T SDH+PVSA FE+ L
Sbjct: 800 RSQQLFHGFQESEITFFPTFRRIRGQALRDPLDAISFQQNYSLVATHGGYRVPSYTDRILYSSLAGMRDSLRCLSYDSCEAVTSSDHKPVSACFEVAL 897
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|570328801|gb|ETO76749.1| (hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 92.4337 bits (228), Expect = 7.310e-16 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
M+ G++F GF E +IAFPP+FR RG AG++ EE L+ Y +G G RVPSYTDRILF S D+R L Y C+ + SDH+PV A F+ +N+ + T
Sbjct: 394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|566025131|gb|ETI48042.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567962440|gb|ETK87965.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567991193|gb|ETL41407.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568050849|gb|ETM47777.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570952542|gb|ETP17799.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 92.4337 bits (228), Expect = 7.504e-16 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
M+ G++F GF E +IAFPP+FR RG AG++ EE L+ Y +G G RVPSYTDRILF S D+R L Y C+ + SDH+PV A F+ +N+ + T
Sbjct: 394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|568020417|gb|ETL94546.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 92.4337 bits (228), Expect = 7.977e-16 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
M+ G++F GF E +IAFPP+FR RG AG++ EE L+ Y +G G RVPSYTDRILF S D+R L Y C+ + SDH+PV A F+ +N+ + T
Sbjct: 394 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 504
BLAST of EWM28400.1 vs. NCBI_GenBank
Match: gi|675191345|ref|XP_008904557.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568095352|gb|ETN10120.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 92.4337 bits (228), Expect = 8.522e-16 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 1 MKAGRVFSGFSEGEIAFPPSFRWRRGAI----AGDFTDEERLAASYVLHKKGDGQRVPSYTDRILFHSLADVRGSLSLVAYELCDALTGSDHRPVSAAFELRLNKKVIGFRT 108
M+ G++F GF E +IAFPP+FR RG AG++ EE L+ Y +G G RVPSYTDRILF S D+R L Y C+ + SDH+PV A F+ +N+ + T
Sbjct: 422 MQDGQIFYGFREAKIAFPPTFRRVRGKALNLDAGNWPMEE-LSECYTTAVEGHGMRVPSYTDRILFFSQPDMRHRLRCAVYASCEEINCSDHKPVLAVFQALVNRDFLPIET 532 The following BLAST results are available for this feature:
BLAST of EWM28400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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