EWM28413.1, cds2259 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|553180722|ref|XP_005853451.1| (multidrug resistance-associated protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295608|gb|EKU22907.1| multidrug resistance-associated protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 Query: 1 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ Sbjct: 1 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|585110798|gb|EWM28413.1| (atp-binding sub-family c (cftr mrp) member 4 [Nannochloropsis gaditana]) HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 Query: 1 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQV 286 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQV Sbjct: 1 MAADGDPTGIGEQPKTSDPAIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQV 286
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|585110802|gb|EWM28417.1| (multidrug resistance-associated protein 4 [Nannochloropsis gaditana]) HSP 1 Score: 359.377 bits (921), Expect = 4.601e-110 Identity = 178/263 (67.68%), Postives = 210/263 (79.85%), Query Frame = 0 Query: 28 TRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRA----PG-EEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 TRPP+YLE AS +ILTFGWMNPVI EGN+R+LT+ DMP L +RD+A LK ++QS W++E +LH PQLW A KA+FPIQLP+Y+PFAIVT KIVQAHVGI GLI VL G +EG VYA VI G+I+LML+HQVQFM WRLGL +RTS+E AIFRKILRMPLS+FSS+GA PG EED DAYKKT+T+AT+LNL TTDVERFQPV+TTSHYL +APFEI AI WCGV +TG PFLIG+ ALL+LIP+Q Sbjct: 82 TRPPSYLEHASWWNILTFGWMNPVIKEGNKRLLTDMDMPALARRDQARHLKELVQSHWESEMKLHPDKPQLWLAMIKAFFPIQLPMYLPFAIVTTCKIVQAHVGIKGLIHVLDRGGPAREGYVYAGVIVFTGWIMLMLHHQVQFMGWRLGLAIRTSLECAIFRKILRMPLSSFSSQGAEGKEGDEVVPGKEEDVDAYKKTITMATVLNLATTDVERFQPVATTSHYLVLAPFEILAIMWCGVHETGLPFLIGMLALLLLIPIQ 344
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1183445835|gb|ORY69988.1| (ABC metal ion transporter [Pseudomassariella vexata]) HSP 1 Score: 105.916 bits (263), Expect = 6.660e-22 Identity = 81/273 (29.67%), Postives = 134/273 (49.08%), Query Frame = 0 Query: 25 DDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGIT--GLIDVLI-YGRGFKEG-----VVYASVIALMGFIVLMLY----HQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 D+G PA E A++ S LTF WM P++ G + LTE+D+ L+ DK + + +++W E + H NP LW A FKAY P+ + T K+V + L+ +LI + + EG VV + IA+ F V +L HQ +A+ G+ +++ + SAI++K LR+ S+EG + + T I+N + D +R Q ++ + ++ APF+I Q G+ L GIA +L++IP+ Sbjct: 230 DEGEECPA--EHATIFSRLTFSWMTPLMKFGYKEYLTEEDLWGLSPSDKTSTTGAMFETAWQYELK-HRTNPSLWLAIFKAYGG-------PYMLATVFKVVNDLAAFSQPQLLRLLISFVDSYSEGKEPQPVVKGAAIAIAMFFVAILQTSMIHQYFQLAFVTGMRIKSGLASAIYKKSLRL-----SNEG---------------RASKTTGDIVNYMAVDAQRLQDLTQFAQQVWSAPFQIIICMVSLYQLVGWSMLSGIAVMLIMIPIN 472
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1095453186|gb|APA10145.1| (hypothetical protein sscle_06g049150 [Sclerotinia sclerotiorum 1980 UF-70]) HSP 1 Score: 105.145 bits (261), Expect = 1.370e-21 Identity = 76/272 (27.94%), Postives = 131/272 (48.16%), Query Frame = 0 Query: 20 AIEDSDDGTRPPAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAEKELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVLIYGRGFKE--GVVYASVIALMGFIV----LMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 A+ED D+ +E A++ SILTFGWM P++ +G ++ LTE D+ L KRD + + SW+ E E H KNP LW A F+++ + + + +Q + L+ + R E V+ + IAL F V M HQ A+ G+ ++T++ +AI++K L++ S+EG + + + I+N + D +R Q ++ L+ AP++I Q G L G+AA++++IP+ Sbjct: 225 ALEDEDE-----CPVEYATVFSILTFGWMTPMMKQGYKKYLTEDDLWNLAKRDTTKACSETFEESWEYEIE-HKKNPSLWVAIFRSFSGPYFRGALFKTVSDSLAFIQPQ--LLKLLIKWVKSRSSDEPQPVIRGAAIALAMFSVSVGQTMALHQYFQRAFETGMRIKTALTAAIYKKSLKL-----SNEG---------------RASKSTGDIVNYMAVDTQRLQDLTQYGQQLWSAPYQILLCMISLYQLVGLSMLAGVAAMILMIPIN 468
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1012206392|ref|XP_016014103.1| (PREDICTED: multidrug resistance-associated protein 4 isoform X1 [Rousettus aegyptiacus]) HSP 1 Score: 103.219 bits (256), Expect = 5.265e-21 Identity = 74/263 (28.14%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 31 PAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAE---KELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVL-----IYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 P L++A+LCS + F W+NP+ G++R L E DM + D++ L LQ WD E E S+ P L +A K Y+ L L V I + K+VQ + + +ID E YA+V+++ ++ +L+H + G+ +R ++ I+RK LR+ A S T I+NL++ DV +F V+ H+L+ P + A+ + G L G+A L++L+P+Q Sbjct: 10 PNPLQSANLCSRVFFWWLNPLFKVGHKRRLEEDDMYSVLPEDRSKYLGEELQGFWDKEVLRAERDSRKPSLTKAIIKCYWKSYLVLGVFTLIEESLKVVQP-IFLGKIIDYFEKHDPTNSVTLHEAYGYATVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNVAMSK--------------------TTTGQIINLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAILIILLPLQ 251
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1012206400|ref|XP_016014105.1| (PREDICTED: multidrug resistance-associated protein 4 isoform X3 [Rousettus aegyptiacus]) HSP 1 Score: 103.219 bits (256), Expect = 5.673e-21 Identity = 74/263 (28.14%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 31 PAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAE---KELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVL-----IYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 P L++A+LCS + F W+NP+ G++R L E DM + D++ L LQ WD E E S+ P L +A K Y+ L L V I + K+VQ + + +ID E YA+V+++ ++ +L+H + G+ +R ++ I+RK LR+ A S T I+NL++ DV +F V+ H+L+ P + A+ + G L G+A L++L+P+Q Sbjct: 10 PNPLQSANLCSRVFFWWLNPLFKVGHKRRLEEDDMYSVLPEDRSKYLGEELQGFWDKEVLRAERDSRKPSLTKAIIKCYWKSYLVLGVFTLIEESLKVVQP-IFLGKIIDYFEKHDPTNSVTLHEAYGYATVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNVAMSK--------------------TTTGQIINLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAILIILLPLQ 251
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1012206408|ref|XP_016014108.1| (PREDICTED: multidrug resistance-associated protein 4 isoform X5 [Rousettus aegyptiacus]) HSP 1 Score: 102.834 bits (255), Expect = 6.350e-21 Identity = 74/263 (28.14%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 31 PAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAE---KELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVL-----IYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 P L++A+LCS + F W+NP+ G++R L E DM + D++ L LQ WD E E S+ P L +A K Y+ L L V I + K+VQ + + +ID E YA+V+++ ++ +L+H + G+ +R ++ I+RK LR+ A S T I+NL++ DV +F V+ H+L+ P + A+ + G L G+A L++L+P+Q Sbjct: 10 PNPLQSANLCSRVFFWWLNPLFKVGHKRRLEEDDMYSVLPEDRSKYLGEELQGFWDKEVLRAERDSRKPSLTKAIIKCYWKSYLVLGVFTLIEESLKVVQP-IFLGKIIDYFEKHDPTNSVTLHEAYGYATVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNVAMSKT--------------------TTGQIINLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAILIILLPLQ 251
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1012206396|ref|XP_016014104.1| (PREDICTED: multidrug resistance-associated protein 4 isoform X2 [Rousettus aegyptiacus]) HSP 1 Score: 102.834 bits (255), Expect = 6.615e-21 Identity = 74/263 (28.14%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 31 PAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAE---KELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVL-----IYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 P L++A+LCS + F W+NP+ G++R L E DM + D++ L LQ WD E E S+ P L +A K Y+ L L V I + K+VQ + + +ID E YA+V+++ ++ +L+H + G+ +R ++ I+RK LR+ A S T I+NL++ DV +F V+ H+L+ P + A+ + G L G+A L++L+P+Q Sbjct: 10 PNPLQSANLCSRVFFWWLNPLFKVGHKRRLEEDDMYSVLPEDRSKYLGEELQGFWDKEVLRAERDSRKPSLTKAIIKCYWKSYLVLGVFTLIEESLKVVQP-IFLGKIIDYFEKHDPTNSVTLHEAYGYATVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNVAMSK--------------------TTTGQIINLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAILIILLPLQ 251
BLAST of EWM28413.1 vs. NCBI_GenBank
Match: gi|1012206404|ref|XP_016014106.1| (PREDICTED: multidrug resistance-associated protein 4 isoform X4 [Rousettus aegyptiacus]) HSP 1 Score: 102.834 bits (255), Expect = 8.138e-21 Identity = 74/263 (28.14%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 31 PAYLETASLCSILTFGWMNPVINEGNRRMLTEKDMPELTKRDKAVSLKGVLQSSWDAE---KELHSKNPQLWRAAFKAYFPIQLPLYVPFAIVTAAKIVQAHVGITGLIDVL-----IYGRGFKEGVVYASVIALMGFIVLMLYHQVQFMAWRLGLDMRTSIESAIFRKILRMPLSAFSSEGAVECRAPGEEDADAYKKTMTVATILNLVTTDVERFQPVSTTSHYLFMAPFEIAAIAWCGVQQTGFPFLIGIAALLMLIPVQ 285 P L++A+LCS + F W+NP+ G++R L E DM + D++ L LQ WD E E S+ P L +A K Y+ L L V I + K+VQ + + +ID E YA+V+++ ++ +L+H + G+ +R ++ I+RK LR+ A S T I+NL++ DV +F V+ H+L+ P + A+ + G L G+A L++L+P+Q Sbjct: 10 PNPLQSANLCSRVFFWWLNPLFKVGHKRRLEEDDMYSVLPEDRSKYLGEELQGFWDKEVLRAERDSRKPSLTKAIIKCYWKSYLVLGVFTLIEESLKVVQP-IFLGKIIDYFEKHDPTNSVTLHEAYGYATVLSVCTLVLAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNVAMSK--------------------TTTGQIINLLSNDVNKFDQVTVFLHFLWAGPLQAIAVTALLWMEIGISCLAGMAILIILLPLQ 251 The following BLAST results are available for this feature:
BLAST of EWM28413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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