EWM28419.1, cds2256 (CDS) Nannochloropsis gaditana

Overview
NameEWM28419.1
Unique Namecds2256
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1319219..1319413 -
Alignment locationCM002458.1:1319015..1319110 -
Alignment locationCM002458.1:1318774..1318857 -
Alignment locationCM002458.1:1318573..1318656 -
Alignment locationCM002458.1:1318450..1318503 -
Alignment locationCM002458.1:1317902..1317979 -
Alignment locationCM002458.1:1317678..1317757 -
Alignment locationCM002458.1:1317500..1317572 -
Alignment locationCM002458.1:1317060..1317338 -
Alignment locationCM002458.1:1316711..1316866 -
Alignment locationCM002458.1:1316533..1316588 -
Alignment locationCM002458.1:1316267..1316477 -

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Properties
Property NameValue
Protein idEWM28419.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100088g14.1238.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1319219..1319413 -
CM002458.1supercontigCM002458.1:1319015..1319110 -
CM002458.1supercontigCM002458.1:1318774..1318857 -
CM002458.1supercontigCM002458.1:1318573..1318656 -
CM002458.1supercontigCM002458.1:1318450..1318503 -
CM002458.1supercontigCM002458.1:1317902..1317979 -
CM002458.1supercontigCM002458.1:1317678..1317757 -
CM002458.1supercontigCM002458.1:1317500..1317572 -
CM002458.1supercontigCM002458.1:1317060..1317338 -
CM002458.1supercontigCM002458.1:1316711..1316866 -
CM002458.1supercontigCM002458.1:1316533..1316588 -
CM002458.1supercontigCM002458.1:1316267..1316477 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28419.1 vs. NCBI_GenBank
Match: gi|585110804|gb|EWM28419.1| (hypothetical protein Naga_100088g14 [Nannochloropsis gaditana])

HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0 
Query:    1 MDFSTASAPSLYSSTHQYYPSPRQMKPAFDYLPHSPPVPAASLMPFPYTRHLDGFLQHKDWANVQDTVKDALFFCARALQEQHDEIIALQRQLIDIQRKEVSNIVPELERKVAAMTQAVQEAQNQNGDALVGMAALRTRMKENETAAERGLRELRRQVGEEAGVWHAVHVKASPNEGGTAPMTRVEGAGHMTPPASQEAHRRMDREAQLLDALSHKAGREEVDELRRRLEEVAFARDLASASAVASIKHARDMERGKEREELLLLKREVARLTHDLHTLTVEKMEGRKMNTEMAADKRSSQNDEEYVKLPLDAPSRLAGRWLWKSGARRMVTRRGGWVLWEKQATNPSFPLSLKAKVGSFEAQPFLWKPRESGVGVPLGGLYHLVVGLFTSRTVPLLQVYLNESLLFTISAPRRPIPIAVSICVFTPWGGAERQGGCGRGRVLRGSRAGGGLGQAYAGLLAISQVVKEDFQRTEGKRLTIK 481
            MDFSTASAPSLYSSTHQYYPSPRQMKPAFDYLPHSPPVPAASLMPFPYTRHLDGFLQHKDWANVQDTVKDALFFCARALQEQHDEIIALQRQLIDIQRKEVSNIVPELERKVAAMTQAVQEAQNQNGDALVGMAALRTRMKENETAAERGLRELRRQVGEEAGVWHAVHVKASPNEGGTAPMTRVEGAGHMTPPASQEAHRRMDREAQLLDALSHKAGREEVDELRRRLEEVAFARDLASASAVASIKHARDMERGKEREELLLLKREVARLTHDLHTLTVEKMEGRKMNTEMAADKRSSQNDEEYVKLPLDAPSRLAGRWLWKSGARRMVTRRGGWVLWEKQATNPSFPLSLKAKVGSFEAQPFLWKPRESGVGVPLGGLYHLVVGLFTSRTVPLLQVYLNESLLFTISAPRRPIPIAVSICVFTPWGGAERQGGCGRGRVLRGSRAGGGLGQAYAGLLAISQVVKEDFQRTEGKRLTIK
Sbjct:    1 MDFSTASAPSLYSSTHQYYPSPRQMKPAFDYLPHSPPVPAASLMPFPYTRHLDGFLQHKDWANVQDTVKDALFFCARALQEQHDEIIALQRQLIDIQRKEVSNIVPELERKVAAMTQAVQEAQNQNGDALVGMAALRTRMKENETAAERGLRELRRQVGEEAGVWHAVHVKASPNEGGTAPMTRVEGAGHMTPPASQEAHRRMDREAQLLDALSHKAGREEVDELRRRLEEVAFARDLASASAVASIKHARDMERGKEREELLLLKREVARLTHDLHTLTVEKMEGRKMNTEMAADKRSSQNDEEYVKLPLDAPSRLAGRWLWKSGARRMVTRRGGWVLWEKQATNPSFPLSLKAKVGSFEAQPFLWKPRESGVGVPLGGLYHLVVGLFTSRTVPLLQVYLNESLLFTISAPRRPIPIAVSICVFTPWGGAERQGGCGRGRVLRGSRAGGGLGQAYAGLLAISQVVKEDFQRTEGKRLTIK 481
The following BLAST results are available for this feature:
BLAST of EWM28419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110804|gb|EWM28419.1|0.000e+0100.00hypothetical protein Naga_100088g14 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2264rna2264Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications