EWM28422.1, cds2251 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|585110809|gb|EWM28422.1| (kinesin family member 6 [Nannochloropsis gaditana]) HSP 1 Score: 2006.88 bits (5198), Expect = 0.000e+0 Identity = 974/974 (100.00%), Postives = 974/974 (100.00%), Query Frame = 0
Query: 1 MEGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEAASSPVAFLPSSSGASCVPSAYQWVYTLSRPLVAHCAQLLLRGESMREGGIKEGATEGKKSASVTIHQPPNLEHENDGMLRHPYYNHRQQHQHHHHHHHQQQQQQQYCDPSFPIKESSCNAPEEEGPHLHGSSSQHRLQSPCAMPVLQAITAAPIQSKQKGRKPKAGNIDWGVKERLQQGQIFFKLGRGGKRHERFLWVSPDMASLRWRKLGRRGGGDGRRDGNKIEALSPTPVSTSLPFAECQRVVVGRDSGSPERGASKNRDGSACFTLYSHDRYVTFEAPRGSQRELLRDAWVAALAHMIHRTQGLTTYRDIHSMSHEHMFGKTRSGVESGPSILPESCAQSEMHDDPTGYKDAESHRQSRSQGEEQCKIEEETPVSAQELPYHREGRSPRVQEYPSMPSAFWTSHTQEPTRYIYPAMSEIPAPAFFTHAQHSLDRQNFCNPHSHQQRHSREALLHRSLSGSNAFLADQSTQGDDHEAPRQSYPDQNDSSFRSFTTPQRKMGSRRDNEQQSAVSSNSRTVNSSEDRYRVPSEASSHPINPNLAATHPASMQSNMQRSGSQTPLKEGAQAERQGSGEVNLHPSLITPSTEVLPHERERAGVAARQGVEESSIQHVGEGREWGRSSREGTLACEGKGYPIYPPPRPNVLTTLFVHTGSLPKGPSPEFSSSPQLSSTSRRHHTLSGSAPSPSSAYPRYSPSQPPDVALSSPPSLPREEKAFTASAERGSYSTKTALVPAYASPSSFRSPSSASFYSAFKRGGSRSQTQASTHDTVNSRQNTSSSFVTSIMVALGGRRKEEKRAEAHASHTPEREKNSGSYAAQGLLKRTASINQQARRAMY 974
MEGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEAASSPVAFLPSSSGASCVPSAYQWVYTLSRPLVAHCAQLLLRGESMREGGIKEGATEGKKSASVTIHQPPNLEHENDGMLRHPYYNHRQQHQHHHHHHHQQQQQQQYCDPSFPIKESSCNAPEEEGPHLHGSSSQHRLQSPCAMPVLQAITAAPIQSKQKGRKPKAGNIDWGVKERLQQGQIFFKLGRGGKRHERFLWVSPDMASLRWRKLGRRGGGDGRRDGNKIEALSPTPVSTSLPFAECQRVVVGRDSGSPERGASKNRDGSACFTLYSHDRYVTFEAPRGSQRELLRDAWVAALAHMIHRTQGLTTYRDIHSMSHEHMFGKTRSGVESGPSILPESCAQSEMHDDPTGYKDAESHRQSRSQGEEQCKIEEETPVSAQELPYHREGRSPRVQEYPSMPSAFWTSHTQEPTRYIYPAMSEIPAPAFFTHAQHSLDRQNFCNPHSHQQRHSREALLHRSLSGSNAFLADQSTQGDDHEAPRQSYPDQNDSSFRSFTTPQRKMGSRRDNEQQSAVSSNSRTVNSSEDRYRVPSEASSHPINPNLAATHPASMQSNMQRSGSQTPLKEGAQAERQGSGEVNLHPSLITPSTEVLPHERERAGVAARQGVEESSIQHVGEGREWGRSSREGTLACEGKGYPIYPPPRPNVLTTLFVHTGSLPKGPSPEFSSSPQLSSTSRRHHTLSGSAPSPSSAYPRYSPSQPPDVALSSPPSLPREEKAFTASAERGSYSTKTALVPAYASPSSFRSPSSASFYSAFKRGGSRSQTQASTHDTVNSRQNTSSSFVTSIMVALGGRRKEEKRAEAHASHTPEREKNSGSYAAQGLLKRTASINQQARRAMY
Sbjct: 1 MEGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEAASSPVAFLPSSSGASCVPSAYQWVYTLSRPLVAHCAQLLLRGESMREGGIKEGATEGKKSASVTIHQPPNLEHENDGMLRHPYYNHRQQHQHHHHHHHQQQQQQQYCDPSFPIKESSCNAPEEEGPHLHGSSSQHRLQSPCAMPVLQAITAAPIQSKQKGRKPKAGNIDWGVKERLQQGQIFFKLGRGGKRHERFLWVSPDMASLRWRKLGRRGGGDGRRDGNKIEALSPTPVSTSLPFAECQRVVVGRDSGSPERGASKNRDGSACFTLYSHDRYVTFEAPRGSQRELLRDAWVAALAHMIHRTQGLTTYRDIHSMSHEHMFGKTRSGVESGPSILPESCAQSEMHDDPTGYKDAESHRQSRSQGEEQCKIEEETPVSAQELPYHREGRSPRVQEYPSMPSAFWTSHTQEPTRYIYPAMSEIPAPAFFTHAQHSLDRQNFCNPHSHQQRHSREALLHRSLSGSNAFLADQSTQGDDHEAPRQSYPDQNDSSFRSFTTPQRKMGSRRDNEQQSAVSSNSRTVNSSEDRYRVPSEASSHPINPNLAATHPASMQSNMQRSGSQTPLKEGAQAERQGSGEVNLHPSLITPSTEVLPHERERAGVAARQGVEESSIQHVGEGREWGRSSREGTLACEGKGYPIYPPPRPNVLTTLFVHTGSLPKGPSPEFSSSPQLSSTSRRHHTLSGSAPSPSSAYPRYSPSQPPDVALSSPPSLPREEKAFTASAERGSYSTKTALVPAYASPSSFRSPSSASFYSAFKRGGSRSQTQASTHDTVNSRQNTSSSFVTSIMVALGGRRKEEKRAEAHASHTPEREKNSGSYAAQGLLKRTASINQQARRAMY 974
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|971508788|dbj|GAQ89410.1| (Kinesin-like protein [Klebsormidium nitens]) HSP 1 Score: 136.346 bits (342), Expect = 5.558e-29 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAE 133
E KYINLSLH+LEQVIVALQE+++ G++ H+PYRNS+MTS+LRDSLGGNCRTV + T+N+ + LEE++STCRFAQR AQ+S V VNEE+DP + L+ E
Sbjct: 271 EAKYINLSLHFLEQVIVALQERSQ-----------------------------GKARSHVPYRNSMMTSVLRDSLGGNCRTVMIATVNTSAEQLEETISTCRFAQRVAQISNQVYVNEELDPVLVIRRLKQE 373
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|1176096564|ref|XP_020618893.1| (kinesin-like protein KIF6 [Orbicella faveolata]) HSP 1 Score: 132.88 bits (333), Expect = 2.721e-28 Identity = 68/133 (51.13%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEA 134
E KYINLSLHYLEQVIVAL +K+R HIPYRNS+MTS+LRDSLGGNC T + T + E +L+ES+STCRFAQR A + DVL+NEEIDP L A L+AE
Sbjct: 60 EAKYINLSLHYLEQVIVALSDKSR---------------------------------SHIPYRNSMMTSVLRDSLGGNCMTTMIATCSLEKKNLDESISTCRFAQRVAMIKNDVLLNEEIDPKLLIAQLKAEV 159
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|558208089|ref|XP_006107047.1| (PREDICTED: kinesin-like protein KIF6 [Myotis lucifugus]) HSP 1 Score: 121.709 bits (304), Expect = 5.909e-28 Identity = 64/133 (48.12%), Postives = 78/133 (58.65%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEA 134
E KYINLSLHYLEQVI+AL EK R HIPYRNS+MTS+LRDSLGGNC T + TL+ E +++ES+STCRFAQR A + + ++NEEIDP + A LQ E
Sbjct: 60 EAKYINLSLHYLEQVIIALSEKHRS---------------------------------HIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNIDESISTCRFAQRVALIKNEAVLNEEIDPRLMIARLQKEV 159
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|1005457714|ref|XP_015765979.1| (PREDICTED: kinesin-like protein KIF6 [Acropora digitifera]) HSP 1 Score: 130.954 bits (328), Expect = 3.280e-27 Identity = 68/133 (51.13%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEA 134
E KYINLSLHYLEQVIVAL EK+R HIPYRNS+MTS+LRDSLGGNC T + T + E +L+ES+STCRFAQR A + DVL+NEEIDP + A L+AE
Sbjct: 268 EAKYINLSLHYLEQVIVALSEKSRS---------------------------------HIPYRNSMMTSVLRDSLGGNCMTTMIATCSLEKKNLDESISTCRFAQRVAMIKNDVLLNEEIDPKLMIAQLKAEV 367
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|909139989|gb|KNE65156.1| (hypothetical protein AMAG_10809 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 128.642 bits (322), Expect = 1.409e-26 Identity = 79/174 (45.40%), Postives = 98/174 (56.32%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEAA--SSPVAFLPSSSGASCVPSAYQWVYTLSRPLVAHCAQLL 173
E K+INLSLHYLEQVIVAL EK+ LG+ HIPYRNS+MTSILRDSLGGNC+T + TL +E LEES+STCRFAQR A +S V VNEE+DP + A L+A+ A + +A L +G P+ Y + R C QL+
Sbjct: 311 EAKHINLSLHYLEQVIVALHEKS------------------LGK------------RMHIPYRNSMMTSILRDSLGGNCKTCMIATLATEEHLLEESISTCRFAQRVALISNRVSVNEEVDPQLIIAKLRAQVAQLKAELALLRGDAGGD--PTDELPEYEIDR-----CRQLI 447
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|909126949|gb|KNE54260.1| (hypothetical protein AMAG_00252 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 127.872 bits (320), Expect = 2.148e-26 Identity = 79/174 (45.40%), Postives = 98/174 (56.32%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEAA--SSPVAFLPSSSGASCVPSAYQWVYTLSRPLVAHCAQLL 173
E K+INLSLHYLEQVIVAL EK+ LG+ HIPYRNS+MTSILRDSLGGNC+T + TL +E LEES+STCRFAQR A +S V VNEE+DP + A L+A+ A + +A L +G P+ Y + R C QL+
Sbjct: 311 EAKHINLSLHYLEQVIVALHEKS------------------LGK------------RMHIPYRNSMMTSILRDSLGGNCKTCMIATLATEEHLLEESISTCRFAQRVALISNRVSVNEEVDPQLIIAKLRAQVAQLKAELALLRGDAGGD--PTDELPEYEIDR-----CRQLI 447
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|673016564|ref|XP_008862243.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574481446|gb|ETW08438.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 126.331 bits (316), Expect = 3.825e-26 Identity = 63/132 (47.73%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAE 133
EG++INLSLH+LEQVI+ALQ K + + G ++H+PYRNS++TS+LR SLGGNC++VF+ TLN E + ++ES+STCRF QRC+++++DV VNEE+D Y L+ LQAE
Sbjct: 272 EGRFINLSLHHLEQVILALQTKPAA--------------------KKGAKAMGKPPNHHVPYRNSMLTSVLRGSLGGNCKSVFIGTLNPEAEFVDESISTCRFMQRCSEVAVDVHVNEEVDVYVLAELLQAE 383
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|1004147366|gb|KXZ55340.1| (KLP1 protein [Gonium pectorale]) HSP 1 Score: 126.716 bits (317), Expect = 3.986e-26 Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAEA 134
E KYINLSLHYLEQVI+ALQEKA NR+ R G HIPYRNS+MT L+DSLGGNCRT V T+N+ +D L+ES+STCRFAQR A + VL+NEE+DP + L+ E
Sbjct: 268 EAKYINLSLHYLEQVIIALQEKAMGM--------NRVGGGRGQGAEGGRCGGGMWRP-HIPYRNSMMTMALKDSLGGNCRTTMVATINAAVDQLDESISTCRFAQRVAMVRNTVLLNEELDPSLIIRRLKQEV 391
BLAST of EWM28422.1 vs. NCBI_GenBank
Match: gi|156359856|ref|XP_001624980.1| (predicted protein [Nematostella vectensis] >gi|156211789|gb|EDO32880.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 123.635 bits (309), Expect = 4.524e-26 Identity = 64/132 (48.48%), Postives = 79/132 (59.85%), Query Frame = 0
Query: 2 EGKYINLSLHYLEQVIVALQEKARRQKDEDEEITNRLSAPRLGRGSSSSSSTGGQSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNSEMDHLEESLSTCRFAQRCAQLSMDVLVNEEIDPYHLSASLQAE 133
E KYIN+SLH+LEQVIVAL EK+R HIPYRNS+MTS+LRDSLGGNC T + T + E +++ES+STCRFAQR A + DVL+NEEIDP + A L+ E
Sbjct: 267 EAKYINVSLHFLEQVIVALSEKSRS---------------------------------HIPYRNSMMTSVLRDSLGGNCMTTMIATCSVEKKNIDESISTCRFAQRVAMIKNDVLLNEEIDPKLMIAQLKRE 365 The following BLAST results are available for this feature:
BLAST of EWM28422.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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