EWM28431.1, cds2241 (CDS) Nannochloropsis gaditana

Overview
NameEWM28431.1
Unique Namecds2241
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1253086..1253186 +
Alignment locationCM002458.1:1253413..1253546 +
Alignment locationCM002458.1:1253724..1253962 +
Alignment locationCM002458.1:1254142..1254260 +
Alignment locationCM002458.1:1254443..1254546 +
Alignment locationCM002458.1:1254789..1254940 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28431.1
Productoxidation resistance protein 1
Orig transcript idgnl|cribi|Naga_101007g1.5030.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1253086..1253186 +
CM002458.1supercontigCM002458.1:1253413..1253546 +
CM002458.1supercontigCM002458.1:1253724..1253962 +
CM002458.1supercontigCM002458.1:1254142..1254260 +
CM002458.1supercontigCM002458.1:1254443..1254546 +
CM002458.1supercontigCM002458.1:1254789..1254940 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom
Homology
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|585110824|gb|EWM28431.1| (oxidation resistance protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
Query:    1 MSLIDAVGLWPTFCVCLGTLYFWMWIFDRYYKRRWPHQMRGGREGGKEGGKKRLYEKGRRGGRGRLDTEEEEAELELLGINKPPASFPPPSSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGDIHD 282
            MSLIDAVGLWPTFCVCLGTLYFWMWIFDRYYKRRWPHQMRGGREGGKEGGKKRLYEKGRRGGRGRLDTEEEEAELELLGINKPPASFPPPSSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGDIHD
Sbjct:    1 MSLIDAVGLWPTFCVCLGTLYFWMWIFDRYYKRRWPHQMRGGREGGKEGGKKRLYEKGRRGGRGRLDTEEEEAELELLGINKPPASFPPPSSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGDIHD 282          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|298706590|emb|CBJ29549.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 211.075 bits (536), Expect = 2.501e-59
Identity = 121/281 (43.06%), Postives = 168/281 (59.79%), Query Frame = 0
Query:    1 MSLIDAVGLWPTFCVCLGTLYFWMWIFDRYYKRRWPHQMRGGREGGKEGGKKRLYEKGRRGGRGRLDTEEEEAELELLGINKPPASFPPPSSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAM-GGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGDI 280
            ++++D +G+W  F VCLG    W+W+FD ++K R PH  +  RE  +   K+R   + R+  +  +    EEAEL  +   +PP         P  ++ E          L +PS IL+ A ++RL  ++P   AM+ W   Y ++RDGASL TLL      R     L+V+EDSWGYVFGG+     + +  YYGTGESFV+ FHP F  ++WTG NDYF +S+   LAM GGGGGFAFQ+DDELD G S PSDT+G+ RLSS   F+CL +EVW F ++
Sbjct:  504 IAMVDVMGVWEAFVVCLGVCVAWLWVFDWHFKSRMPHNQQM-REEERSKKKQRSPLRTRKKKKNAV----EEAELVDM---RPPGVVRHEVESPVEEARE--------VVLDQPSKILTAARLRRLAEAVPLGQAMKTWKLGYSIARDGASLWTLLQNC---RGRGPCLIVVEDSWGYVFGGFVAGSMKESQKYYGTGESFVYSFHPSFKGHRWTGANDYFCISSDSWLAMGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWFFSNL 765          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|698456172|ref|XP_009702219.1| (PREDICTED: oxidation resistance protein 1-like isoform X2 [Cariama cristata])

HSP 1 Score: 124.79 bits (312), Expect = 3.812e-31
Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   91 SSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            SS   ++   D  P    P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+WGF
Sbjct:   30 SSKQATNIKTDLEPEAFRPNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMLGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWGF 215          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|699651460|ref|XP_009896490.1| (PREDICTED: oxidation resistance protein 1 isoform X4 [Picoides pubescens])

HSP 1 Score: 124.405 bits (311), Expect = 5.301e-31
Identity = 81/188 (43.09%), Postives = 107/188 (56.91%), Query Frame = 0
Query:   91 SSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            SS   +++  D  P    P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P+F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+W F
Sbjct:   30 SSKQATNTKPDLEPEAFRPNLSDPSELLQPDQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMQGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPEFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWAF 215          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|694852513|ref|XP_009467624.1| (PREDICTED: oxidation resistance protein 1 isoform X4 [Nipponia nippon])

HSP 1 Score: 124.79 bits (312), Expect = 6.615e-31
Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   91 SSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            SS   ++   D  P    P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+WGF
Sbjct:   57 SSKQATNIKTDLEPEAFRPNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMLGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWGF 242          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|698456168|ref|XP_009702218.1| (PREDICTED: oxidation resistance protein 1-like isoform X1 [Cariama cristata])

HSP 1 Score: 124.79 bits (312), Expect = 7.673e-31
Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   91 SSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            SS   ++   D  P    P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+WGF
Sbjct:   57 SSKQATNIKTDLEPEAFRPNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMLGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWGF 242          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|699651455|ref|XP_009896489.1| (PREDICTED: oxidation resistance protein 1 isoform X3 [Picoides pubescens])

HSP 1 Score: 124.405 bits (311), Expect = 9.687e-31
Identity = 81/188 (43.09%), Postives = 107/188 (56.91%), Query Frame = 0
Query:   91 SSLPPSDSTEDPFPPRPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            SS   +++  D  P    P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P+F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+W F
Sbjct:   57 SSKQATNTKPDLEPEAFRPNLSDPSELLQPDQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMQGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPEFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWAF 242          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|1210015637|ref|XP_021402131.1| (oxidation resistance protein 1 isoform X8 [Lonchura striata domestica])

HSP 1 Score: 123.635 bits (309), Expect = 9.926e-31
Identity = 77/170 (45.29%), Postives = 99/170 (58.24%), Query Frame = 0
Query:  109 PSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL Y+ M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+W F
Sbjct:   48 PNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTL-YRTMTGLD-TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFTIQDIEIWAF 215          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|1095964558|ref|XP_018768578.1| (PREDICTED: oxidation resistance protein 1 isoform X8 [Serinus canaria])

HSP 1 Score: 123.635 bits (309), Expect = 1.036e-30
Identity = 76/170 (44.71%), Postives = 98/170 (57.65%), Query Frame = 0
Query:  109 PSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL   +M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+W F
Sbjct:   48 PNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTLYRTMMGLD--TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFMFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFTIQDIEIWAF 215          
BLAST of EWM28431.1 vs. NCBI_GenBank
Match: gi|696967924|ref|XP_009554552.1| (PREDICTED: oxidation resistance protein 1 isoform X4 [Cuculus canorus])

HSP 1 Score: 124.405 bits (311), Expect = 1.054e-30
Identity = 77/170 (45.29%), Postives = 99/170 (58.24%), Query Frame = 0
Query:  109 PSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMAERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGG-FAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGF 277
            P+LS+PS +L    I++L  SLP R     W  VY  ++ G SL TL   +M     +  LLVI+DS G VFG     PF+ + G+YGTGE+F+F F P F ++KWTG N +FI  +   LA GGGGG FA  LD +L  G S    T+GN  LS R  F    IE+WGF
Sbjct:   75 PNLSDPSELLQPEQIEKLTKSLPPRTIGYPWTLVYSTAKHGMSLKTLYRTMMGLD--TPVLLVIKDSDGQVFGALASEPFKVSDGFYGTGETFLFTFSPDFEVFKWTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNHTLSKREDFIIQDIEIWGF 242          
The following BLAST results are available for this feature:
BLAST of EWM28431.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110824|gb|EWM28431.1|0.000e+0100.00oxidation resistance protein 1 [Nannochloropsis ga... [more]
gi|298706590|emb|CBJ29549.1|2.501e-5943.06conserved unknown protein [Ectocarpus siliculosus][more]
gi|698456172|ref|XP_009702219.1|3.812e-3143.62PREDICTED: oxidation resistance protein 1-like iso... [more]
gi|699651460|ref|XP_009896490.1|5.301e-3143.09PREDICTED: oxidation resistance protein 1 isoform ... [more]
gi|694852513|ref|XP_009467624.1|6.615e-3143.62PREDICTED: oxidation resistance protein 1 isoform ... [more]
gi|698456168|ref|XP_009702218.1|7.673e-3143.62PREDICTED: oxidation resistance protein 1-like iso... [more]
gi|699651455|ref|XP_009896489.1|9.687e-3143.09PREDICTED: oxidation resistance protein 1 isoform ... [more]
gi|1210015637|ref|XP_021402131.1|9.926e-3145.29oxidation resistance protein 1 isoform X8 [Lonchur... [more]
gi|1095964558|ref|XP_018768578.1|1.036e-3044.71PREDICTED: oxidation resistance protein 1 isoform ... [more]
gi|696967924|ref|XP_009554552.1|1.054e-3045.29PREDICTED: oxidation resistance protein 1 isoform ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2249rna2249Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications