EWM28482.1, cds2191 (CDS) Nannochloropsis gaditana

Overview
NameEWM28482.1
Unique Namecds2191
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1144913..1145164 -
Alignment locationCM002458.1:1143114..1144670 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28482.1
Productphosphoinositol transporter
Partialtrue
Orig transcript idgnl|cribi|Naga_100058g27.4249.mrna
GbkeyCDS
End range.
End range1145164
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1144913..1145164 -
CM002458.1supercontigCM002458.1:1143114..1144670 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
Homology
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|585110898|gb|EWM28482.1| (phosphoinositol transporter, partial [Nannochloropsis gaditana])

HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0
Identity = 602/602 (100.00%), Postives = 602/602 (100.00%), Query Frame = 0
Query:    1 LPPSLPPSLSPWPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDHAPVLEVIAPHHLPVAYGGNDPLALGEAPEEVDFRAYVQRVNSGLEGRAEAEEVGVGGEKAGSLPTGSSGTGNRERKVGGRRAEVDDGGEPERGGDELGPGVWREGLLGVGERAMARVAGGLQALRPAFLTPLSTAQRANLGRENRFVYDEHRRQWVLIEEEEEEEEEERWEREHRPHGRGRGAEDMEEERLVRAIQAAHEMGGRSSSISGRLAAVLRGEEGGRKGEEAEATAAAAAQARTVEDLEGERQGGESEGGREAGRKERGRVESPGEEKNRTWPGSVFLVLLVAWRAMALSLLWVVPLWLLDTWDTAAHEVALLFFLGAMVAVGLWAVHATCPLVSVYAACIATLVGLSLASLLLGPLGGSSDGSGRWVGLSGEGRETAGEALSVIMAALSLLTTAGSFSWAVHVSRALFDKEASEARRDLIPSLLLADAVGVILGPVIFSTARASEQETSHPLGGRAMWFSIVGFAGLASVGMIVWPARPLLAPLTSTGGR 602
            LPPSLPPSLSPWPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDHAPVLEVIAPHHLPVAYGGNDPLALGEAPEEVDFRAYVQRVNSGLEGRAEAEEVGVGGEKAGSLPTGSSGTGNRERKVGGRRAEVDDGGEPERGGDELGPGVWREGLLGVGERAMARVAGGLQALRPAFLTPLSTAQRANLGRENRFVYDEHRRQWVLIEEEEEEEEEERWEREHRPHGRGRGAEDMEEERLVRAIQAAHEMGGRSSSISGRLAAVLRGEEGGRKGEEAEATAAAAAQARTVEDLEGERQGGESEGGREAGRKERGRVESPGEEKNRTWPGSVFLVLLVAWRAMALSLLWVVPLWLLDTWDTAAHEVALLFFLGAMVAVGLWAVHATCPLVSVYAACIATLVGLSLASLLLGPLGGSSDGSGRWVGLSGEGRETAGEALSVIMAALSLLTTAGSFSWAVHVSRALFDKEASEARRDLIPSLLLADAVGVILGPVIFSTARASEQETSHPLGGRAMWFSIVGFAGLASVGMIVWPARPLLAPLTSTGGR
Sbjct:    1 LPPSLPPSLSPWPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDHAPVLEVIAPHHLPVAYGGNDPLALGEAPEEVDFRAYVQRVNSGLEGRAEAEEVGVGGEKAGSLPTGSSGTGNRERKVGGRRAEVDDGGEPERGGDELGPGVWREGLLGVGERAMARVAGGLQALRPAFLTPLSTAQRANLGRENRFVYDEHRRQWVLIEEEEEEEEEERWEREHRPHGRGRGAEDMEEERLVRAIQAAHEMGGRSSSISGRLAAVLRGEEGGRKGEEAEATAAAAAQARTVEDLEGERQGGESEGGREAGRKERGRVESPGEEKNRTWPGSVFLVLLVAWRAMALSLLWVVPLWLLDTWDTAAHEVALLFFLGAMVAVGLWAVHATCPLVSVYAACIATLVGLSLASLLLGPLGGSSDGSGRWVGLSGEGRETAGEALSVIMAALSLLTTAGSFSWAVHVSRALFDKEASEARRDLIPSLLLADAVGVILGPVIFSTARASEQETSHPLGGRAMWFSIVGFAGLASVGMIVWPARPLLAPLTSTGGR 602          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|299469886|emb|CBN76740.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.895 bits (359), Expect = 7.474e-32
Identity = 69/137 (50.36%), Postives = 96/137 (70.07%), Query Frame = 0
Query:   15 YIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKD----HAPVLEVIAPHHLPVAYGGNDPLALGEAPEEVDFRAYVQRVNS 147
            Y+W  L+P D E G  V++LDV  +G+ DL G+AL F+K A+ +VQ HYVERS +MFI+NAP++FS++W+VI P+L+E T+ KI I+  D     A +LE IAP +LP  YGG  PL LGE+ EE+D R YV  + +
Sbjct:  399 YMWGVLEP-DFENGQAVTVLDVQGLGMRDLAGEALGFVKQATAIVQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEELDLRTYVASIAT 534          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|813164664|ref|XP_012203392.1| (hypothetical protein SPRG_08772 [Saprolegnia parasitica CBS 223.65] >gi|641531774|gb|KDO25828.1| hypothetical protein SPRG_08772 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 108.227 bits (269), Expect = 7.756e-21
Identity = 54/143 (37.76%), Postives = 83/143 (58.04%), Query Frame = 0
Query:   12 WPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL---GKDHAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSG 148
            +  ++WN +       G  + ILD+  V + D  GD + F+K  S V + +Y ER YK+FI+N P+WF+++WK ++PL++  TR KIN++    +    +LE I P +LPV YGG        L  +P+E   R YV R+NSG
Sbjct:  565 YNEFLWNVIDRRPAPFGTQLKILDLNGVALSDFGGDVVAFMKQCSAVGEAYYPERLYKVFIVNPPSWFNMIWKAVSPLVNPKTREKINVVKGQKEIQKALLEYIDPENLPVEYGGTCECVGGCLTHSPDENLLREYVDRLNSG 707          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|1173952951|gb|OQS00525.1| (serine protease family S09A [Thraustotheca clavata])

HSP 1 Score: 107.457 bits (267), Expect = 1.740e-20
Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   12 WPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL---GKDHAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSGLEGRA 153
            +  ++WN +       G M+ I+D+  V + D  GD + F+K  S V + +Y ER YK+FI+N P+WF+++WK ++PL++  TR KIN++    +    +LE I   +LPV YGG        L  +P EV  R YV+R+NSG +  A
Sbjct:  529 YNEFLWNVIDRRPLPLGTMLKIVDMNGVSLTDFGGDVVSFMKQCSSVGELYYPERLYKVFIVNPPSWFNIIWKAMSPLINPKTRDKINVVKGQKEIQKALLEYIDAENLPVEYGGTCACEGGCLTHSPHEVLLRDYVERLNSGEDCTA 676          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|585108841|gb|EWM26753.1| (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 103.219 bits (256), Expect = 2.284e-20
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   15 YIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDHA--PVLEVIAPHHLPVAYGG-----NDPLAL-GEAPEEVDFRAYVQRVN 146
            + +N+L P   E    ++ILDV  VGI DL G+A +FL+ +  ++ +HY ERS  + I+ AP WFSVLWK+I PL++  T+ K  I  K      + E + P  +PV YGG     + P +   ++PEEV  R +V  VN
Sbjct:  194 FCYNQLHPS--ETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVN 331          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|567981699|gb|ETL32135.1| (hypothetical protein L916_15227 [Phytophthora parasitica])

HSP 1 Score: 99.7525 bits (247), Expect = 2.742e-20
Identity = 48/117 (41.03%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   14 RYIWNKLQPED----DERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDH--APVLEVIAPHHLPVAYGGN 124
            +Y  +++ P D     E   M  ILD   +G+ D+ G+  EF++  + V+Q+HY +RS+K+FI+N P+WF + WK + PLL+E TR K NIL +    A +LE I   +LPV YGG 
Sbjct:    6 KYAAHQICPCDACAASETQKMCIILDARGIGMRDMGGEVFEFIRRCTGVMQRHYPQRSFKIFIVNVPSWFGMAWKGVKPLLNEATRAKTNILTESETAATLLEFIDADNLPVEYGGT 122          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|1173953874|gb|OQS01387.1| (hypothetical protein ACHHYP_01192 [Achlya hypogyna])

HSP 1 Score: 105.531 bits (262), Expect = 4.655e-20
Identity = 54/146 (36.99%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    9 LSPWPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL---GKDHAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSG 148
            L+ +  ++WN +       G  + I+D+  V + D  GD + F+K  S V + +Y ER YK+FI+N P+WF+++WK ++PL++  TR KIN++    +    +LE I   +LPV YGG+       L  +P+EV  R YV+R+NSG
Sbjct:  560 LAFYNEFLWNVVDARPAPLGTQLKIVDMNGVSLSDFGGDVVAFMKQCSAVGEAYYPERLYKVFIVNPPSWFNMIWKAVSPLVNPKTREKINVVKGQKEIQKALLEYIDAENLPVEYGGSCECPGGCLTGSPDEVLLREYVERLNSG 705          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|669140692|ref|XP_008605914.1| (hypothetical protein SDRG_02124 [Saprolegnia diclina VS20] >gi|530742828|gb|EQC41070.1| hypothetical protein SDRG_02124 [Saprolegnia diclina VS20])

HSP 1 Score: 105.145 bits (261), Expect = 6.734e-20
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
Query:   12 WPRYIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL---GKDHAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSG 148
            +  ++WN +       G  + ILD+  V + D  GD + F+K  S V + +Y ER YK+FI+N P+WF+++WK ++PL++  TR KIN++    +    +LE I   +LPV YGG        L  +P+E   R YV R+NSG
Sbjct:  576 YNEFLWNVIDRRSAPFGTQLKILDLNGVALSDFGGDVVAFMKQCSAVGEAYYPERLYKVFIVNPPSWFNMIWKAVSPLVNPKTREKINVVKGQKEIQKALLEYIDAENLPVEYGGTCECVGGCLTHSPDENLLREYVDRLNSG 718          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|301112889|ref|XP_002998215.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112509|gb|EEY70561.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 104.76 bits (260), Expect = 1.158e-19
Identity = 49/146 (33.56%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   15 YIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL--GKD-HAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSGLEGRAE 154
            ++WN + P     G M+ I D+  + + D+  D + + K    V+  +  ER Y++FI+N PAWF+++WK+++PL++  TR +I++L   KD    +LE +AP +LP  YGG           +PEE D R + + VN+  +G A 
Sbjct:  694 FMWNVIDPRPFPEGNMLKIYDIKGISMADMSSDVVNYTKKWGEVIATYNPERVYQVFIINPPAWFNLIWKLVSPLVNPKTRERIHVLRGHKDITKALLEFVAPENLPKEYGGECQCEGGCFTHSPEENDIRQWTEFVNANYQGDAN 839          
BLAST of EWM28482.1 vs. NCBI_GenBank
Match: gi|970655084|gb|KUF93301.1| (hypothetical protein AM588_10004486 [Phytophthora nicotianae])

HSP 1 Score: 102.064 bits (253), Expect = 1.444e-19
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 0
Query:   15 YIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINIL--GKD-HAPVLEVIAPHHLPVAYGGNDPL---ALGEAPEEVDFRAYVQRVNSGLEG 151
            ++WN + P     G M+ I D+  + + DL  D + + K    VV  +  ER Y++FI+N PAWF+++WK+++PL++  TR +I++L   KD    +LE +AP +LP  YGG           +PEE D R + + VN+   G
Sbjct:  236 FMWNVIDPRPFPEGNMLKIYDIKGISMADLSSDVVNYTKKWGEVVATYNPERVYQVFIINPPAWFNLIWKLVSPLVNPKTRERIHVLRGHKDITKALLEFVAPENLPKEYGGECQCEGGCFTHSPEENDIREWTEFVNANYNG 378          
The following BLAST results are available for this feature:
BLAST of EWM28482.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110898|gb|EWM28482.1|0.000e+0100.00phosphoinositol transporter, partial [Nannochlorop... [more]
gi|299469886|emb|CBN76740.1|7.474e-3250.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|813164664|ref|XP_012203392.1|7.756e-2137.76hypothetical protein SPRG_08772 [Saprolegnia paras... [more]
gi|1173952951|gb|OQS00525.1|1.740e-2037.16serine protease family S09A [Thraustotheca clavata... [more]
gi|585108841|gb|EWM26753.1|2.284e-2039.29phosphoinositol transporter [Nannochloropsis gadit... [more]
gi|567981699|gb|ETL32135.1|2.742e-2041.03hypothetical protein L916_15227 [Phytophthora para... [more]
gi|1173953874|gb|OQS01387.1|4.655e-2036.99hypothetical protein ACHHYP_01192 [Achlya hypogyna... [more]
gi|669140692|ref|XP_008605914.1|6.734e-2037.06hypothetical protein SDRG_02124 [Saprolegnia dicli... [more]
gi|301112889|ref|XP_002998215.1|1.158e-1933.56conserved hypothetical protein [Phytophthora infes... [more]
gi|970655084|gb|KUF93301.1|1.444e-1934.97hypothetical protein AM588_10004486 [Phytophthora ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2199rna2199Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications