EWM28488.1, cds2189 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|585110904|gb|EWM28488.1| (snf2 domanin containing helicase [Nannochloropsis gaditana]) HSP 1 Score: 1829.3 bits (4737), Expect = 0.000e+0 Identity = 888/888 (100.00%), Postives = 888/888 (100.00%), Query Frame = 0 Query: 1 MGVETGPSTRQSPANMTPSSQRQPLQKHTPRKTDTTRTVVGSGNGKKQTRSSSASPTKCSPSFKRRKTESEGESAVPTVLSQSINRLSPGPHPSSPHDLVCTKSERETGDLDDLRALNDPILTASIKAAQEEAERAVAVARAKEDEARKKSGPVVPRLLQGVGVTVNDAPTAEEALESTSNAPASHASSSLDPGLPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEGGLSVDGRMYDLVVIAGSDLLSGISQGNREGGRE 888 MGVETGPSTRQSPANMTPSSQRQPLQKHTPRKTDTTRTVVGSGNGKKQTRSSSASPTKCSPSFKRRKTESEGESAVPTVLSQSINRLSPGPHPSSPHDLVCTKSERETGDLDDLRALNDPILTASIKAAQEEAERAVAVARAKEDEARKKSGPVVPRLLQGVGVTVNDAPTAEEALESTSNAPASHASSSLDPGLPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEGGLSVDGRMYDLVVIAGSDLLSGISQGNREGGRE Sbjct: 1 MGVETGPSTRQSPANMTPSSQRQPLQKHTPRKTDTTRTVVGSGNGKKQTRSSSASPTKCSPSFKRRKTESEGESAVPTVLSQSINRLSPGPHPSSPHDLVCTKSERETGDLDDLRALNDPILTASIKAAQEEAERAVAVARAKEDEARKKSGPVVPRLLQGVGVTVNDAPTAEEALESTSNAPASHASSSLDPGLPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEGGLSVDGRMYDLVVIAGSDLLSGISQGNREGGRE 888
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|676385603|ref|XP_009036080.1| (hypothetical protein AURANDRAFT_53418 [Aureococcus anophagefferens] >gi|323453075|gb|EGB08947.1| hypothetical protein AURANDRAFT_53418 [Aureococcus anophagefferens]) HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0 Identity = 353/677 (52.14%), Postives = 462/677 (68.24%), Query Frame = 0 Query: 209 RTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADV-NIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVP-DADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFN----KDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEGGLSVDGRMYDLVVI-AGSDLLSGI 878 + AQLDTLL KA ++ FI+ ++A P ++ KR + A D + +A KM KG ++QP + G LK YQ+EGL WL++L+ NGL+GILADEMGLGKTIQVI+L A +REK V GP V APLATLPNW+ E +KW+P S LYHG+ R LR+ M + E FP++VTSYE+ IDR L + +++L++DEGQR+KNR+ RL ELK++ +E+RLLLSGTPIQN+LEELW+LLNF P IFDDL VF+SWFGF++IG++T VDDIID+E ++R+VTKLHE+LRPFLLRR+K+DV LP KKE+VVYA M+ +Q Y L +L+++L+ G+P + ++ + N M RK NHPFL EP G IG A PK L+ A GK +LL+R++ +L AQGH+VLLFSQMTE+L ++EDYL +R+W Y RIDG V++ RQ QI+AFN + F F+LSTRAGGLGINLA ADTVI++DSDWNPH+DAQA DRAHRIGQ + V VYR LT GS EI MME QISKKKLER+++ GGD+ +AGRRSRG++TT+GLR LL DDV QR G G A+E I+E+EL ++DR +F G+ +G+MYD+V AG LLS + Sbjct: 80 KKAQLDTLLAKAEQYSAFIVNS------QMSAAQPEPEPEAGSKRKSTSGGGSSKKKKKGEAGDAAAEMAEAQAKM---KGDRNLVQQPTGMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALIAHIREKNVKGPICVAAPLATLPNWMNEFKKWVPGISALLYHGSKQHRADLRKTAMATSLQNEED--FPVIVTSYEVCIIDRAPLSHFKFKYLIIDEGQRVKNRDCRLVRELKKLNTENRLLLSGTPIQNTLEELWSLLNFVNPQIFDDLNVFQSWFGFRNIGQETQVDDIIDDESKDRIVTKLHEILRPFLLRRVKSDVLRGVLPDKKEIVVYAPMTPLQKSYEALILERKLKDSLIAAGIPATSHEVSEQNMLMNQRKNANHPFLFGEPRDANGEFIGVATPKALVNAAGKFRLLERILPKLKAQGHKVLLFSQMTELLNIIEDYLRWREWNYFRIDGGVELSERQRQIDAFNGEGQESNEYFVFMLSTRAGGLGINLATADTVILFDSDWNPHQDAQAMDRAHRIGQKRDVVVYRFLTSGSAEIGMMEKQISKKKLERMAVQGGDYNKAGRRSRGELTTDGLRSLLNDDVNIAQRI--------GAAGDNATADE-ISEQELDLVMDRAKIFSPAGIPTEGKMYDVVSSQAGPGLLSNL 736
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|397564339|gb|EJK44169.1| (hypothetical protein THAOC_37319 [Thalassiosira oceanica]) HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0 Identity = 368/828 (44.44%), Postives = 486/828 (58.70%), Query Frame = 0 Query: 118 NDPILTASIKAAQEEAERAVAVARAKEDEARKKSGPVVPRLLQGV----GVTVNDAPTAEEA---LESTSNAPASHASSSLDPGLPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEH----------------------GGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGV-LKTYQLEGLNWLSSLWMNGLNGILADEMGLG---------------KTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSY-HWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKD----TTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKA-GTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNK-------------DPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEG--GLSVDGRMYDLVVIAGSDLLSGIS 879 +D T + A++EAE A ++A+ P+LLQ V V+++ EA L++T S ++ + RT QLD LL +A +++FI ++ K S + K +KK + E + A+AQA +D ++ + GG QP +L G LK YQLEG+ WL SL+ NG++GILADEMGLG KTIQVISL A LR V GPF+VVAPLATLPNWV E KWLP V +HGT +R A+ P+ ++ FPI+VTSYE+A + K L + +LVVDEGQR+KN L LK I S +RLLLSGTPIQN+L+ELW+LLNF P IFDDL +F+SWFGF+ IG+ TT +DI+ EE + + VTKLHE+LRPFLLRR+K DV DLP KKE+VVYA MS++Q Y ++ + G LR+ L+ QG+ A + QTN QM RK CNHPF+ EP+ A G +G A+P++LI A GK LLDRM+ RL+ H+VL+FSQMT +L V+EDYL YRQWKYCRIDGS +D RQ Q++ FN D F FLLSTRAGG+GINLA ADT II+DSDWNPH+D+QA DR HRIGQ + VAVYR+LT+ SV+I+MME QISKKKLER++I GGDFR+AG RSRG+ ++ L LL DDVKD+ + G I +EE I++R +F EG + +G+MYD++ D++ ++ Sbjct: 22 DDFFKTIEAQQAKDEAEHA--------NDAQPNQATSAPKLLQDAIKKGEVNVDESEAESEANRKLDATKGNLKSEGLETVSEEKKDDDGGQQPHVHHRTNQLDFLLSRAKEYSDFISADIDELQSNMAAQAAAAQNGGQGKKSKKDKKRKSEGEKKSKKKRKKNNGEPTDGEVKLASAQAKYDNNKSTNVGS-------GGNAIFCQPKNLAGGCKLKNYQLEGVRWLVSLFENGVSGILADEMGLGLKFDVVMTSFSLTSRKTIQVISLVAHLRTMSVAGPFIVVAPLATLPNWVREFEKWLPVQPVVRFHGTSKDRDAMLAG--PLNSKKRRDGDFPIIVTSYEVAIREEKRLNKIGEYTYLVVDEGQRLKNHRCTLIQSLKRIKSANRLLLSGTPIQNNLDELWSLLNFVNPQIFDDLNIFQSWFGFRDIGQKGQGATTEEDILQEERKNQTVTKLHEILRPFLLRRIKKDVLTDLPPKKEIVVYAGMSKLQDGYSKMIEQGVLRDILLNQGIESARTLSQTNKQMNHRKNCNHPFMFGEPIDPATGAHLGSAHPQLLIRASGKFALLDRMLDRLYKDKHQVLIFSQMTSLLNVIEDYLLYRQWKYCRIDGSTNIDERQRQMDVFNSEKTAGEGGTRNDADDRHFVFLLSTRAGGVGINLATADTCIIFDSDWNPHQDSQAMDRCHRIGQERPVAVYRLLTVNSVDIDMMEKQISKKKLERMAIVGGDFRKAGSRSRGEFKSDELGSLLDDDVKDLSAK------------GTDVESVRIDDEEFEYIMNRDKLFTEGEDAIPTEGKMYDVIDQKEGDMIGAMN 820
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|1210531501|dbj|GAX09857.1| (hypothetical protein FisN_11Lh164 [Fistulifera solaris]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 352/764 (46.07%), Postives = 472/764 (61.78%), Query Frame = 0 Query: 143 KEDEARKKSGP----------VVPRLLQGVGVTVNDAPTAEEALESTSNAPASHASSSLDPGLPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASL-KNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSY-HWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKD----TTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKA-GTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNK------------DPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEG--GLSVDGRMYDLVVIAGSDLL 875 KE+E R S P P+LLQ + D E S+ +AS D +G + + +R QLD LL KA ++NFI L+ A A A K +KK R ++D A + A + AL A QP +L + VLK YQLEG+ WL+SL+ NG++GILADEMGLGKT+Q ++L A L + V+GPFL+VAPLATLPNWV E KWLP+ V YHG ER+A+ + M R + +P +VTSYE+A D+ L + +L+VDEG R+KN L + LK + + +RLLL+GTPIQNSL+ELW+LLNF P IFDDL VF+SWFGF++IG+ T + I+ E+ + + VTKLH +LRPFLLRR+K DV ++P KKE++VY+ +S++Q Y L + G LR++L+QQG+ + QTN M RK NHPFL EP+ A G+ IG +P++L+ A GK LLDRM+ RL GH+VL+FSQMT +L V+EDYL +R+W YCRIDGS +++ RQ Q++ FN D +F FLLSTRAGGLGINL ADT II+DSDWNP D+QA DR HRIGQT+ VAVYR++T SV+IEMME QISKKKLER++I GGDF++AGRRS GDI EGL+ LL D++D++ R GD I++EE KI+DRK +F G + ++G+MYD++ D+L Sbjct: 65 KEEETRLLSSPSLPSQPKDVHAAPKLLQKA---LEDGQVQASDSEQESDG-EKNASLQGDADEKKDGTSEAPHIHQRANQLDFLLSKAHEYSNFIARDLDDLQSAMADQARKTLAKMEKKNK--RKGSDDGKGATKKA--KLAALDKAV------------FIQPPNLASDCVLKDYQLEGVRWLASLFENGVSGILADEMGLGKTVQCVALIAHLLTQKVSGPFLIVAPLATLPNWVREFEKWLPTQPVIRYHGNNAEREAMFKGPMNPKLRRNSD--YPFIVTSYEVAIRDQARLEKLSEFTYLIVDEGHRLKNHRCTLISSLKRLKAGNRLLLTGTPIQNSLDELWSLLNFVNPQIFDDLSVFQSWFGFKNIGQKNQGATKEETILLEQRKNQTVTKLHSILRPFLLRRIKTDVLKEMPPKKEVIVYSGISKLQEGYADLIEKGTLRDSLIQQGIESGRTLSQTNKMMNHRKNINHPFLFGEPIDPATGSHIGTVHPQLLVRASGKFALLDRMLDRLFKDGHQVLIFSQMTSVLNVMEDYLRFRKWSYCRIDGSTEINERQRQMDKFNAEKYLDNGKRNTADDRLFVFLLSTRAGGLGINLTAADTCIIFDSDWNPFADSQAMDRCHRIGQTRPVAVYRLITANSVDIEMMEKQISKKKLERMTIAGGDFKKAGRRSGGDIDVEGLQSLLQSDIRDLEARGGDIENIA------------ISDEEFEKIMDRKKLFATGKDAIPLEGKMYDVIETESGDVL 794
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|1210526730|dbj|GAX14378.1| (hypothetical protein FisN_11Hh164 [Fistulifera solaris]) HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0 Identity = 329/699 (47.07%), Postives = 449/699 (64.23%), Query Frame = 0 Query: 198 NGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGV-LKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSY-HWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKD----TTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKA-GTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNK------------DPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFEEG--GLSVDGRMYDLVVIAGSDLL 875 +GA+ +R QLD LL KA ++NFI L+ A A K++K+ N+ + + ++ L + + QP +L + LK YQLEG+ WL+SL+ NG++GILADEMGLGKT+Q ++L A L + V+GPFL+VAPLATLPNWV E KWLP+ V YHG ER+A+ + M R + +P +VTSYE+A D+ L + +L+VDEG R+KN L + LK + + +RLLL+GTPIQNSL+ELW+LLNF P IFDDL VF+SWFGF++IG+ T + I+ E+ + + VTKLH +LRPFLLRR+KADV ++P KKE++VY+ +S++Q Y L + G LR++L+QQG+ + QTN M RK NHPFL EP+ A G+ IG +P++L+ A GK LLDRM+ RL GH+VL+FSQMT +L V+EDYL +R+W YCRIDGS +++ RQ Q++ FN D +F FLLSTRAGGLGINL ADT II+DSDWNP D+QA DR HRIGQT+ VAVYR++T SV+IEMME QISKKKLER++I GGDF++AGRRS GDI EGL+ LL D++D++ R GD I+++E KI+DRK +F G + ++G+MYD++ D+L Sbjct: 123 DGASEGPHIHQRANQLDFLLSKAHEYSNFIARDLDDLQSAMAE-------KARKQLATDGKKNKRKGSDDGKGAAKKAKLAALDKAI---------FVQPPNLASDCNLKDYQLEGVRWLASLFENGVSGILADEMGLGKTVQCVALIAHLLTQKVSGPFLIVAPLATLPNWVREFEKWLPTQPVIRYHGNNAEREAMFKGPMNPKLRRNSD--YPFIVTSYEVAIRDQARLEKLSEFTYLIVDEGHRLKNHRCTLISSLKRLKAGNRLLLTGTPIQNSLDELWSLLNFVNPQIFDDLSVFQSWFGFKNIGQKNQGATKEETILLEQRKNQTVTKLHSILRPFLLRRIKADVLKEMPPKKEVIVYSGISKLQEGYADLIEKGTLRDSLIQQGIESGRTLSQTNKMMNHRKNINHPFLFGEPIDPATGSHIGTVHPQLLVRASGKFALLDRMLDRLFKDGHQVLIFSQMTSVLNVMEDYLRFRKWSYCRIDGSTEINERQRQMDKFNAEKYLDNGKRNTADDRLFVFLLSTRAGGLGINLTAADTCIIFDSDWNPFADSQAMDRCHRIGQTRPVAVYRLITANSVDIEMMEKQISKKKLERMTIAGGDFKKAGRRSGGDIDVEGLQSLLQSDIRDLEARGGDIENIA------------ISDDEFEKIMDRKKLFATGKDAIPLEGKMYDVIESESGDVL 791
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|219113657|ref|XP_002186412.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583262|gb|ACI65882.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 285/511 (55.77%), Postives = 363/511 (71.04%), Query Frame = 0 Query: 296 QPASLKNG-VLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSY-HWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTT--VDD--IIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKA-GTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNK-------------DPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDF 786 QP +L +G +LK YQLEG+ WL+SL+ NG++GILADEMGLGKTIQ ++L A L +GV+GPFLVVAPLATLPNWV E KWLP V YHGT PER+A+ + P+ + S FP +VTSYE++ D+ L + +L+VDEG R+KN L LK + + +RLLL+GTPIQN+L+ELW+LLNF P IFDDL VF+SWFGF+ IG+ T D+ II EE + + VTKLHE+LRPFLLRR+K DV ++P KKE++VY+ +S++Q Y L G LR+ L+ QG+ + + QTN M RK NHPFL EP+ A G +G A+P++L+ A GK LLDRM+ RL+ GH+VL+FSQMT +L V+EDYL +R W +CRIDGS +D RQ Q++ FN D F FLLSTRAGGLGINL ADTVII+DSDWNPH D+QA DRAHR+GQ VAVYR+LT+ SV+IEMME QISKKKLER++I GGDF Sbjct: 1 QPKNLADGCILKDYQLEGVRWLASLYENGVSGILADEMGLGKTIQCVALIAHLLLQGVSGPFLVVAPLATLPNWVREFEKWLPQHPVVRYHGTAPEREAMLKG--PLNPKLRRSPNFPFIVTSYEVSIRDQAKLEKLTEFTYLIVDEGHRLKNHRCTLLTSLKRLKAANRLLLTGTPIQNTLDELWSLLNFVNPQIFDDLSVFQSWFGFKDIGQKTRGGTDETSIIIEERKNQTVTKLHEILRPFLLRRIKLDVLSEMPPKKEVIVYSGISKLQAGYADLIDKGTLRDTLIAQGIENGRTLSQTNKLMNHRKNINHPFLFGEPIDPASGVHLGTAHPQLLVRASGKFALLDRMLSRLYRDGHQVLIFSQMTSVLNVMEDYLLFRNWNFCRIDGSTNIDERQRQMDQFNAEKTAGENGRRSKADDRHFVFLLSTRAGGLGINLTSADTVIIFDSDWNPHADSQAMDRAHRLGQDLPVAVYRLLTVNSVDIEMMEKQISKKKLERMTIAGGDF 509
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|224009730|ref|XP_002293823.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970495|gb|EED88832.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 275/483 (56.94%), Postives = 345/483 (71.43%), Query Frame = 0 Query: 305 LKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSY-HWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGK-----DTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKA-GTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNK-------------DPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMM 767 LK YQLEG+ WL SL+ NG++GILADEMGLGKTIQVISL A LR +GPF+VVAPLATLPNWV E KWLPS V +HGT PER A+ P+ + FP++VTSYE+A D K L + +LVVDEGQR+KN L + LK I + +RLLLSGTPIQN+L+ELW+LLNF P IFDDL +F+SWFGF++IG+ T +DI+ E+ + + V+KLH++LRPFLLRR+K DV D+P KKE+VVYA MS++Q Y ++ + G LR+ L+ QG+ A + QTN QM RK CNHPF+ EP+ A G +G A+P++LI A GK LLDRM+ RL H+VL+FSQMT +L V+EDYL +RQWKYCRIDGS K+D RQ Q++ FN D F FLLSTRAGGLGINLA ADT II+DSDWNPH+D+QA DR HRIGQ + VAVYR+LT+ SV++EMM Sbjct: 7 LKDYQLEGVRWLVSLYENGVSGILADEMGLGKTIQVISLIAHLRTMKCSGPFIVVAPLATLPNWVREFEKWLPSLPVVRFHGTAPERDAMIAG--PLNPKNRKDDNFPVIVTSYEVAIRDEKRLNKIGEFTYLVVDEGQRLKNHRCTLISSLKRIKAANRLLLSGTPIQNNLDELWSLLNFVNPTIFDDLSIFQSWFGFKNIGQKGVQGSTREEDIVAEQRQNQTVSKLHDILRPFLLRRIKMDVLTDMPPKKEVVVYAGMSKLQAGYAQMIEQGVLRDMLLNQGIEQARTLSQTNKQMNHRKNCNHPFMFGEPIDPASGAHMGSAHPQLLIRASGKFALLDRMLERLFKDKHQVLIFSQMTSLLNVIEDYLLFRQWKYCRIDGSTKIDERQRQMDVFNSEKTAGKGGTRNDGDDRHFVFLLSTRAGGLGINLATADTCIIFDSDWNPHQDSQAMDRCHRIGQNRPVAVYRLLTVNSVDVEMM 487
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|673033456|ref|XP_008870689.1| (hypothetical protein H310_07139 [Aphanomyces invadans] >gi|574473551|gb|ETW00554.1| hypothetical protein H310_07139 [Aphanomyces invadans]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 293/668 (43.86%), Postives = 412/668 (61.68%), Query Frame = 0 Query: 198 NGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHL--MSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDE------EHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDAD-KIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPS-IFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAG--RRSRGDITTEGLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKGMFE 853 + A S S +R +LD+LL+KA ++ F+L +E A S KKR + +D A+ Q ++ + E +QP+ G L+ YQLEG+ W+ +L+ NGLNGILADEMGLGKT+QVI + A L+ KGV GP+LVVAPL+TL NW E K+ P+ +YHGT PER+ +R +Q+ G +T+ FPI++TSYE+ D M + W+++++DEG R+KN + L ELK+ SE+RLLLSGTP+QN+L ELW+LLNF PD+FDDL +F+SWF S T DDII + + + +VV+KLHE+LRPF+LRR+K DV +D+P+K E+VVY M+++Q YY+L +L +AL ++ A+ + N + LRK CNHP+L E +G + + LIEA GKL ++D M+ +L GH+VL+FSQMT +L +LEDYLH+R +KYCR+DG RQ+ ++AFNK S + FLLSTRAGGLGINL G DTVI+YDSDWNPH+D QAQDR HRIGQTK V VYR++T S E M++ +K+ LER+ ++ G+F + + +T E L LL DD++ R+ GG I+E EL + DRK + + Sbjct: 60 DDAFKSISYAKRVEKLDSLLEKAGAYSKFLLSNMEPIQVEANVVDNAATPLSSKKRKGRQPKIKDGASKLQKINENQSG---------AHTVSEMKFKQPSLFTGGTLRAYQLEGIQWMCNLFENGLNGILADEMGLGKTVQVIGMLAQLKAKGVRGPYLVVAPLSTLSNWYNEFEKFTPTIPAMIYHGTTPERKLMRSKQLKRG--TQTNPDFPIIITSYEVIIRDASSFNSMGFVWKFMIIDEGHRLKNMDCLLMRELKKCRSENRLLLSGTPLQNNLSELWSLLNFLLPDVFDDLALFQSWFNSSSANASATTDDIISKHDVLTNQKQGQVVSKLHEILRPFVLRRLKTDVVLDVPSKTEIVVYCPMTDLQASYYKLIADKELAKALQEKHGKSANAAMTLRNMAVQLRKCCNHPYLFDEDTDASGNVVTGDH---LIEAAGKLVIMDSMLKQLLQNGHKVLIFSQMTRVLDILEDYLHHRNYKYCRLDGRTNFSERQQSMDAFNKPESDLQVFLLSTRAGGLGINLTGGDTVILYDSDWNPHQDNQAQDRVHRIGQTKDVVVYRLITENSFENRMLQRANAKRTLERVVLSRGEFSSVSGEKANPSSLTMEELENLLKDDIQ--IRQEATGG---------------ISESELAMLCDRKQVVD 696
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|698786832|ref|XP_009826448.1| (hypothetical protein H257_03856 [Aphanomyces astaci] >gi|574119276|gb|ETV84756.1| hypothetical protein H257_03856 [Aphanomyces astaci]) HSP 1 Score: 547.354 bits (1409), Expect = 1.595e-180 Identity = 292/641 (45.55%), Postives = 409/641 (63.81%), Query Frame = 0 Query: 196 PMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHL--MSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFG-FQSIGKDTTVDDIIDEE------HRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALV-QQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPS--IFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQA-GRR--SRGDITTEGLRRLLADDVKDIQRRHGDGG 821 P++ A S S +R +LD+LL+KA ++ F+L +E AA A V + K+ GR E A+ + +A + +M+ +QP+ G L+ YQLEG+ W+ +L+ NGLNGILADEMGLGKT+QVI + A L+ KGV GP+LVVAPL+TL NW E RK+ P+ +YHGT ER+ +R +Q+ G +T+ FPI++TSYE+ D M Y W+++++DEG R+KN N L ELK+ SE+RLLLSGTP+QN+L ELW+LLNF PD+FDDL +F+SWF + T+ +DII +E + +VV+KLHE+LRPF+LRR+K DV +D+P+K E+VVY M+++Q YY+L +L +AL + G + + N + LRK CNHP+L E G + + LI+A GKL ++D M+ +L +GH+VL+FSQMT +L +LEDYL +RQ +YCR+DGS RQ ++ FN DPS + FLLSTRAGGLGINL GADTVI+YDSDWNPH+D QAQDR HRIGQTK V VYR++T S E M++ +K+ LER+ ++ G+F A G + + +T E L LL DD++ R+ GG Sbjct: 58 PVDDAFKSISYAKRVEKLDSLLEKAGAYSKFLLSNME----AAPVEANVVVEAAAPKKRKGRQPKVKEGASKLQKINEHQASAHSVSEMK--------FKQPSLFTGGTLRAYQLEGIQWMCNLFENGLNGILADEMGLGKTVQVIGMLAQLKAKGVRGPYLVVAPLSTLSNWYNEFRKFTPTIPAMIYHGTTQERKQMRVQQLKRG--TQTNADFPIIITSYEVIIRDASSFNAMGYVWKFMIIDEGHRLKNMNCLLMRELKKCRSENRLLLSGTPLQNNLSELWSLLNFLLPDVFDDLALFQSWFNSSNATNASTSTNDIISKEDVLTNQKQGQVVSKLHEILRPFVLRRLKVDVVLDVPSKTEIVVYCPMTDLQASYYKLIATKELAQALTAKHGKSASTAMTLRNMAIQLRKCCNHPYLFDEETDATGNVVTGDH---LIQAAGKLVVMDAMLKQLLERGHKVLIFSQMTRVLDILEDYLVHRQIQYCRLDGSTHFTERQRSMDTFN-DPSGGLQVFLLSTRAGGLGINLTGADTVILYDSDWNPHQDNQAQDRCHRIGQTKDVVVYRLITENSFENRMLQRANAKRTLERVVLSRGEFSSASGEKAPTHTSLTMEELEGLLQDDIQ--IRQEATGG 678
BLAST of EWM28488.1 vs. NCBI_GenBank
Match: gi|1072225897|gb|OEU10642.1| (SNF2_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 537.339 bits (1383), Expect = 2.479e-179 Identity = 270/489 (55.21%), Postives = 341/489 (69.73%), Query Frame = 0 Query: 296 QPASL-KNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQM--PVGRERETSKLFPIVVTSYEMASIDRKHLMSYH-WRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKD----TTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVT-KAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFN-------------KDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKAVAVYRMLTIGSV 762 QP +L K+ LK YQLEG+ WL+SL+ NG++GILADEMGLGKTIQVI L A L + V GPFLVVAPLATLPNWV E KWLPS VC YHG + REE M P+ + + K FP+++TS+E A D+K L + +++VDEG R+KN L LK++ + +RLLL+GTPIQN+L+ELW LLNF P IFDDL VF+SWFGF+ IG+ TT +DII EE + + VTKLHE+LRPFLLRR+K DV +LP KKE+VVY+ MS +Q Y L + G LRE L++QG+ D + QTN M RK NHPF+ EP+ G IG + P++L+ A GK L+DRM+ RLH GH+VL+FSQMT++L ++EDYL++R WKYCRIDGS K+D RQ ++ FN D F F+LSTRAGGLGINL ADT II+DSDWNPH D+QA DR HR+GQT+ VAVYR+LT SV Sbjct: 51 QPPNLTKSCTLKDYQLEGVRWLASLYENGVSGILADEMGLGKTIQVIGLVAHLLTQEVTGPFLVVAPLATLPNWVREFIKWLPSKPVCRYHGAAAD----REEMMRGPLNPKGKRDKNFPVIITSFETAIRDQKKLQKLGPFAYVIVDEGHRLKNHRCMLIRSLKQLDASNRLLLTGTPIQNTLDELWALLNFVNPQIFDDLNVFQSWFGFKDIGQKSHNGTTEEDIIAEERKNKTVTKLHEILRPFLLRRVKIDVLKELPPKKEVVVYSGMSRLQLGYADLIEKGTLREELLRQGIGDGKNLSQTNKMMNQRKNVNHPFMFGEPLDPSTGVHIGTSYPQLLVRASGKFALMDRMLDRLHTDGHQVLIFSQMTKVLNIIEDYLNFRNWKYCRIDGSTKIDDRQTAMDVFNAETTGAADGSRNYSDDRYFVFMLSTRAGGLGINLTSADTCIIFDSDWNPHADSQAMDRCHRMGQTRPVAVYRLLTSNSV 535 The following BLAST results are available for this feature:
BLAST of EWM28488.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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