EWM28500.1, cds2183 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|585110916|gb|EWM28500.1| (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 1962.96 bits (5084), Expect = 0.000e+0 Identity = 969/969 (100.00%), Postives = 969/969 (100.00%), Query Frame = 0
Query: 1 MPICFVKELLSQDVHQSFLEMHEWKLVKTSAAAHGSLDNFHAAYLLTLYRRRRHSSTSARIHAYNPSKKLTSHFKTRQPLSMVKYTEDGLVLTLDSDDEEVVAEDREEGDAEEAKAAKITRPESVDAKKTRQKQLKKKEKKQNGVAERKKASEMDPSFAFEEADDGFGGKAQWDFKEALVKLGLGVAREGTSEIEKQSAAVVEGDKDEGEGEREEEDEGLVADAVKDLNTEEALVKAARRKQRLEDKEGRLQERERRKLEERRKGSGNDGLPVPEDTDADPKAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAIRVKTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMAGRERESAYKFRGLSATSAAGGGLRKRSKPSHHAFKSKSKHRRR 969
MPICFVKELLSQDVHQSFLEMHEWKLVKTSAAAHGSLDNFHAAYLLTLYRRRRHSSTSARIHAYNPSKKLTSHFKTRQPLSMVKYTEDGLVLTLDSDDEEVVAEDREEGDAEEAKAAKITRPESVDAKKTRQKQLKKKEKKQNGVAERKKASEMDPSFAFEEADDGFGGKAQWDFKEALVKLGLGVAREGTSEIEKQSAAVVEGDKDEGEGEREEEDEGLVADAVKDLNTEEALVKAARRKQRLEDKEGRLQERERRKLEERRKGSGNDGLPVPEDTDADPKAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAIRVKTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMAGRERESAYKFRGLSATSAAGGGLRKRSKPSHHAFKSKSKHRRR
Sbjct: 1 MPICFVKELLSQDVHQSFLEMHEWKLVKTSAAAHGSLDNFHAAYLLTLYRRRRHSSTSARIHAYNPSKKLTSHFKTRQPLSMVKYTEDGLVLTLDSDDEEVVAEDREEGDAEEAKAAKITRPESVDAKKTRQKQLKKKEKKQNGVAERKKASEMDPSFAFEEADDGFGGKAQWDFKEALVKLGLGVAREGTSEIEKQSAAVVEGDKDEGEGEREEEDEGLVADAVKDLNTEEALVKAARRKQRLEDKEGRLQERERRKLEERRKGSGNDGLPVPEDTDADPKAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAIRVKTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMAGRERESAYKFRGLSATSAAGGGLRKRSKPSHHAFKSKSKHRRR 969
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|298706016|emb|CBJ29130.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0 Identity = 325/661 (49.17%), Postives = 429/661 (64.90%), Query Frame = 0
Query: 282 KAKEFFQELSDDLRIQASG---PGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAIRV---KTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMAGRERESAYKF 936
KA E+F++ DD G G V F QLN+SRPLLRA+E +GYV PT +Q +P LAG+DVCASA TGSGKTAAF LPILERLL+RPK+VA TRV++++PTREL VQ H M LSQ+TD+ LVVGG+KN++AQE ELRARPDIV+CTPGRM+DHL NS V +DD+EILVLDE D+L++LGF EV LVK CP RQTLLFSATM KVD LA LALN+PVRV+ RL QEFVR+R + E+ R AILL+LL RTFKT+T+VF +TK AHR ++L ++GI+A ELHGNL +RLE+L FK G VLVATDLAARGLDI+G+ VIN EMPR+ +Y+HRVGRTARAGCGG++V+L+ ++ R+ MK++++ + +KSR VP + H+ +K+ ++A++++ L EE E++ R A MEA+RA NLVEHQ+EI RPA+QW S+ K + + AE A GK + R + N ++ A ++ ++K HRL R KRRR+ + +E E +E E+ + +P + S KS+ R AK+ A+ + E + +R K GSGSA FD +L+T KK GG + EG A ES YKF
Sbjct: 282 KAAEYFED-GDDADASPGGDDASSGGVPFQQLNISRPLLRAVEAMGYVTPTSVQQRAVPFALAGRDVCASATTGSGKTAAFLLPILERLLYRPKKVAVTRVMIITPTRELGVQIHSMCRSLSQFTDIACALVVGGNKNLKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEADRLLELGFQEEVAELVKSCPIGRQTLLFSATMNTKVDDLASLALNKPVRVKASPMNSAPQRLVQEFVRIR-QSREQDREAILLSLLTRTFKTKTIVFFDTKILAHRLNIVLGIAGIRAAELHGNLAMTQRLEALDRFKSGDVTVLVATDLAARGLDITGVHTVINFEMPRSADSYIHRVGRTARAGCGGRSVTLIGESRRIVMKEVLKTQGEGVEIKSRAVPQSAIDHFRSKIEGMEASVKAILTEEKVEKEERCAMMEADRAVNLVEHQKEIHARPARQWIVSQQRKTELAEESKAEAVAQALKAAGKTTIPVPPRGGDADRGNT---DQGAAKKEREQKLHRLTRKKRRRILAREADEREAKEEAEELKAQGKSVP------SNVSSKSMVRAAKKEAREAEKKNEDKPLAQLRGAKRKLDVGSGSA--------FDFDLNT---KK------GGAAKGKDGEGKAAGAAESRYKF 914
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|551634871|ref|XP_005820274.1| (hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712] >gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]) HSP 1 Score: 529.635 bits (1363), Expect = 3.378e-173 Identity = 287/557 (51.53%), Postives = 379/557 (68.04%), Query Frame = 0
Query: 282 KAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQ------------VAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRL--FMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGER 824
K +E+F DD +Q++ T F +L+LSRPLL+A+ LG++ PT IQ+ VIPV L GKDVCAS+ TGSGKTAAFALPILERLL+RP+RVAATRVLVL+PTRELAVQ H M+ +L+ +TD+ +V+GG KN + QE ELR +PD+VV TPGRM+DHL N+PG+ + LEILVLDE D+L+++GF EV+ LVK CP+QRQT+LFSATMT VD LA +L RPVRV D S++ V L QEFVR+R K E+ R AILL L RTF RT+VFC K AHR R++ L G++ ELHGNLTQA+RLE+L FKE K+D L+ATDLA RGLDI G+ V+N E+PR A YVHRVGRTARAG G+AV+L D+ R +K++V+ D VK RVVPP +A +++ EL+A + + ++EEA ERQ R A+ME E+A+NLVEH+E+IL RP K WFQS+ EK R + + + GK + +++ K+ + S K +NR KRRR++M +++E E+
Sbjct: 97 KEREYF----DDAPVQSAE---TSSFQELHLSRPLLKAVSSLGFIKPTVIQSMVIPVALQGKDVCASSRTGSGKTAAFALPILERLLYRPRRVAATRVLVLTPTRELAVQAHAMMEKLAAFTDIRCYIVIGGVKN-QLQETELRKKPDVVVATPGRMIDHLRNAPGIGFEALEILVLDEADRLLEMGFTEEVQELVKMCPQQRQTMLFSATMTHDVDKLAAFSLRRPVRVTADGSIRTDETQGTLNKVAVPSSLLQEFVRIR-KEHEKDREAILLCLCTRTFHKRTIVFCREKRRAHRLRIIFGLLGLRVEELHGNLTQAQRLEALENFKEEKSDFLLATDLAGRGLDIKGVDVVVNLEVPRNLAEYVHRVGRTARAGRKGRAVTLADDSQRTKSMLKEVVRSAPD--VVKRRVVPPDAIAAMRSRIEELEADVAAVMEEEAVERQMRIADMEGEKARNLVEHEEDILARPKKTWFQSREEKLQARESNPSSGRSQDRRERGKRGREEQEEGEDGDPPQISK--KKVIGNSKADKYAGMNRRKRRRLQMQEDDELEK 640
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|1072235951|gb|OEU20679.1| (DEAD-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 511.531 bits (1316), Expect = 3.303e-169 Identity = 255/475 (53.68%), Postives = 336/475 (70.74%), Query Frame = 0
Query: 306 LFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVD---------VSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVED---------------TSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAA 756
+F++L LSRPLLR I +GYV PT IQ++VIPV LAG+D+CASAVTGSGKTAAF LPILERLL+R T+ L+L+PTRELA Q + M++ L+Q+T + + LVVGGSKNM AQ +ELR RP I+V TPGR+LDH+ NS GV+++D+E LVLDE D+L+DLGF EV ++K CP RQTLLFSATM KVD L L++ RPVR+R+ L+VAPRLEQEFVRVR +R A+LLA+L RTF T+T+VF +TKA AHR +L L GI+ ELHGNLTQ +RL+SL F++ + D+L+ATDLAARGLDIS + VIN EMP TY+HR+GRTARAG GG++ +L+ + R MK+I++D + ++T++SR +P V+AH+ K+ L+ IE L+ EA R R AEME RAQN++EH +EI RP + WF S+ EK++ + AA
Sbjct: 3 VFTELTLSRPLLRGIVAMGYVKPTAIQSSVIPVALAGRDICASAVTGSGKTAAFLLPILERLLYRS--AGRTKTLILTPTRELAAQCYGMIATLAQFTKITSVLVVGGSKNMNAQISELRTRPQIIVATPGRLLDHVTNSAGVTLEDVEFLVLDEADRLLDLGFQEEVNEIIKSCPVDRQTLLFSATMNTKVDDLISLSMKRPVRIRISDKGSNSSNGRDLEVAPRLEQEFVRVRSGNEGINREAMLLAMLTRTFSTQTIVFFDTKAKAHRMMILCGLCGIQGAELHGNLTQPQRLQSLEQFRKSEVDILLATDLAARGLDISRVETVINFEMPNQVETYIHRIGRTARAGRGGRSCTLIGEGRRHLMKEIMKDASERKQITPNESSTNRSQSATIRSRSIPAAVIAHFVKKIRSLEEHIEEVLQAEAVARMDRMAEMEVMRAQNIIEHSDEIKGRPQRHWFASEKEKQSTKEAA 475
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|223992625|ref|XP_002285996.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977311|gb|EED95637.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 511.531 bits (1316), Expect = 7.493e-169 Identity = 259/492 (52.64%), Postives = 337/492 (68.50%), Query Frame = 0
Query: 307 FSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLL-----------FRPKR----VAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVD---------VSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTS------------------TVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAA 756
FSQL LSRPLLR + +G+V PTPIQ +V+PV +AG+DVCASAVTGSGKTAAF LP++ER+L KR +AATR LVL+PTRELA Q M++ ++++TD+ L+VGG+KN+ +Q ELR+RPD+VV TPGR+LDH+ NS GV +DDLE L+LDE D+L+DLGF EV +VK CP +RQTLLFSATM+ KVD L L+L +PVRV+ ++VAPRLEQEFVR+R +R +LLALL RTF +R +VF +TK+ AHR ++ L GIK ELHGNLTQ +RLE+L F+EG DVL+ATDLAARGLDI G+ VIN EMP TYVHR+GRTARAG GG + +L+ + R MK++++D E+ S ++SR +PPPV+AH+ AK++ L+ + L EA R R AEMEA RAQN++EH EI QRP K+WF S E+ +V+ AA
Sbjct: 4 FSQLGLSRPLLRGVASMGFVTPTPIQASVLPVAMAGRDVCASAVTGSGKTAAFLLPVMERILQRGGGRTTMGGLNAKRKASALAATRALVLTPTRELAAQCVSMMTAMAKFTDLRAALIVGGAKNVMSQAAELRSRPDVVVATPGRLLDHITNSQGVDLDDLEFLILDEADRLLDLGFQDEVHEIVKACPTERQTLLFSATMSTKVDDLIKLSLKQPVRVQATEKGKKDNAPTGVEVAPRLEQEFVRIRAGNEGVNREGMLLALLTRTFTSRVIVFFDTKSAAHRLMIVCGLCGIKCTELHGNLTQVQRLEALEAFREGNVDVLLATDLAARGLDIPGVECVINFEMPSQVDTYVHRIGRTARAGRGGNSCTLIGEGRRYLMKEVIKDAEEKSRRASAGRKQTQDSASTSGVIRSRTIPPPVVAHFVAKINFLEQHVREVLDAEAVARIDRIAEMEAMRAQNIIEHSSEIKQRPQKEWFASSKERISVKEAA 495
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|813184896|ref|XP_012206620.1| (hypothetical protein SPRG_11024 [Saprolegnia parasitica CBS 223.65] >gi|641528486|gb|KDO22710.1| hypothetical protein SPRG_11024 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 518.464 bits (1334), Expect = 7.504e-167 Identity = 358/921 (38.87%), Postives = 504/921 (54.72%), Query Frame = 0
Query: 82 MVKYTEDGLVLTLDSDDE-EVVAEDREEGDAEEAKAAKITRPESVDAKKTRQKQLKKKEKKQNGVAERKKASEMDPSFAFEEADDGFGGKA--QWDFKEALVKL--------GLGVAREGTSEIE------------KQSAAVVEGDK-DEGEGEREEEDEGLVADAVKDLNTEEALVKAARRKQRLEDKEGRLQERERRKLEERRKGSGNDGLPVPEDTDADPKAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAI-------RVKTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMA--GRERESAYKFRGLSATSAAGGGLRKRSKPSHHAFKSKSKHRRR 969
M +D L++T+ SDDE EV+ +E +A+E + A I+ + + KK + KQ ++ SE+ SF F++ D F G A WDF +A+ ++ G V +IE K+ AA G++ D+ + E +E + + ++ + + +E RLQE L ER+ G+ D KA FF + +D + + P FS L LSR L+RA+ LG+ PTPIQ IPV L+GKD+CASA TGSGKTAAF LPILERL FR ++ AATRVL++ P RELA Q +L +L ++TD+ + L VGG +R QE ELR PD+V+CTPGRM+DHL NS V +DDLEILVLDE D+L++LGF EV+ LV CP RQT+LFSAT+T+KVD L L++ RPVR+ D +A L QEFVR+R EE R AILLAL RTFKT T+VF TK AHR +L L+GIKA ELHG+L Q ERL++L F++G AD+L+ TD+AARG+D+ G+ AVIN +MP+ TYVHRVGRTARAG G+AV+L ++ RL MK++ + VKSR VP V+ + A+V ++ + S +KEE E++ R AE EA R NL+ HQ EI RPA+ WFQ++ EK+ V + AE+A ++A L+ +E + KK H LN KRR E+ + E+ +A EQ+ +K+ T A+ AKR A + R+ I R K + + G GFD+++ + + P R E A G++ E +K + + LRK+ K S ++FKSK+++ RR
Sbjct: 1 MAAPQDDALMMTIMSDDEIEVLDSSSDEEEAKEQELAVIS-----------KSKKKKLQSKQAQQKKKAAVSEISESFQFDD-DSSFKGPAGCSWDFTKAIAQIDDMERRVYGESVRSTIQKKIELRRKERQAERREKRKAAQAAGEEADDDDSENDEPAKKAPKEVLEKDVNDSEDDDDDDSENDDVVEEARLQE----ALAERKAAQGSSDHV---DEIEKKKAAAFFDDNNDVFK--KASPDDLKTFSDLKLSRALVRAVTSLGFEKPTPIQQRAIPVALSGKDICASAQTGSGKTAAFLLPILERLQFRSRKAAATRVLIICPVRELATQCQSVLEQLGKFTDVTSALAVGGLP-LREQEAELRKLPDVVICTPGRMIDHLRNSRCVHMDDLEILVLDEADRLLELGFTEEVQELVGMCPLARQTMLFSATLTSKVDELIKLSMKRPVRISTDPLYDMAQNLVQEFVRIRP-TREEDREAILLALCTRTFKTNTIVFMETKKHAHRMMILFGLAGIKAAELHGDLDQRERLQALQNFRDGSADILLCTDIAARGIDVEGVHAVINYQMPKDVTTYVHRVGRTARAGRKGRAVTLTSESRRLIMKEVARHCH--GFVKSRSVPDAVINQWRARVQAMEEDVSSVMKEETLEKRMREAEREASRTTNLIRHQSEIHGRPARTWFQNEKEKKVV--SDRAEEA---------------RQAKLAE-----------MEAAEDKKKHPLNHKKRRMTEIREREQALLEDAAEQN----------KKVFTSQHVAGAAKSAKRKAIEEKREIANRSISEIHELKRQKREKMQQQRAARG------GFDEDMTRAKK---------PSAPKARPESAARGGKKDEFVFKEKITN--------LRKQGKKSVNSFKSKTRYNRR 835
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|669162048|ref|XP_008616586.1| (hypothetical protein SDRG_12299 [Saprolegnia diclina VS20] >gi|530731777|gb|EQC30019.1| hypothetical protein SDRG_12299 [Saprolegnia diclina VS20]) HSP 1 Score: 517.694 bits (1332), Expect = 1.518e-166 Identity = 360/921 (39.09%), Postives = 504/921 (54.72%), Query Frame = 0
Query: 82 MVKYTEDGLVLTLDSDDE-EVVAEDREEGDAEEAKAAKITRPESVDAKKTRQKQLKKKEKKQNGVAERKKASEMDPSFAFEEADDGFGGKA--QWDFKEALVKLGLGVAREGTSEIEKQSAAVVEGDKDEGEGEREEEDEGLVADAVKDLNTEEALVKAARR--KQRLED-------------------KEGRLQERERRKLEERRKGSGNDGLPVPEDTDADPKAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTSQKSVAREAKRAAQPTRVRAEGRAAGAI-------RVKTARGSGSAGTLQLTEGFDKELDTVYRKKGREEPGGGTGPHQRDEGMA--GRERESAYKFRGLSATSAAGGGLRKRSKPSHHAFKSKSKHRRR 969
M +D L++T+ SDDE EV+ +E +A+E + A I+ + + KK + KQ ++ SE+ SF F++ + F G A WDF +A+ ++ R + +E + E + ER E+ + A + + + A++ K+ LE +E RLQE L ER+ N G D KA FF + +D + + P FS L LSR L+RA+ LG+ PTPIQ IPV L+GKD+CASA TGSGKTAAF LPILERL FR ++ AATRVL++ P RELA Q +L +L ++TD+ + L VGG +R QE ELR PD+V+CTPGRM+DHL NS V +DDLEILVLDE D+L++LGF EV+ LV CP RQT+LFSAT+T+KVD L L++ RPVR+ D +A L QEFVR+R EE R AILLAL RTFKT T+VF TK AHR +L L+GIKA ELHG+L Q ERL++L F++G AD+L+ TD+AARG+D+ G+ AVIN +MP+ TYVHRVGRTARAG G+AV+L ++ RL MK++ + VKSR VP PV+ + A+V ++ + S +KEE E++ R AE EA R NL+ HQ EI RPA+ WFQ++ EK+ V + AE+A ++A L+ +E + KK H LN KRR E+ + E+ +A EQ+ +K+ T A+ AKR A + R+ I R K + + G GFD+++ + P P R E A G++ E +K + + LRK+ K S ++FKSK+++ RR
Sbjct: 1 MAAPQDDALMMTIMSDDEIEVLDSSSDEEEAKEQELAVIS-----------KSKKKKLQSKQAQQKKKAAVSEISESFQFDD-ESSFKGPAGCSWDFTKAIAQIDDMERRVYGESVRSTIQKKIEARRKERQAERREKRKAATAAGEDADDDDSENDEPAKKAPKEVLEKDANDSEEDDDDDSENDDVVEEARLQE----ALAERK---ANQGSSDHVDEIEKKKAAAFFDDNNDVFK--KASPDDLKTFSDLKLSRALVRAVTSLGFEKPTPIQQRAIPVALSGKDICASAQTGSGKTAAFLLPILERLQFRSRKAAATRVLIICPVRELATQCQSVLEQLGKFTDVTSALAVGGLP-LREQEAELRKLPDVVICTPGRMIDHLRNSRCVHMDDLEILVLDEADRLLELGFTEEVQELVGMCPIARQTMLFSATLTSKVDELIKLSMKRPVRISTDPLYDMAQNLVQEFVRIRP-TREEDREAILLALCTRTFKTNTIVFMETKKHAHRMMILFGLAGIKAAELHGDLDQRERLQALQNFRDGSADILLCTDIAARGIDVEGVHAVINYQMPKDVTTYVHRVGRTARAGRKGRAVTLTSESRRLIMKEVARHCH--GFVKSRSVPDPVINQWRARVQAMEEDVSSVMKEETLEKRMREAEREASRTTNLIRHQSEIHGRPARTWFQNEKEKKVV--SDRAEEA---------------RQAKLAE-----------MEAAEDKKKHPLNHKKRRMTEIREREQALLDDAAEQN----------KKVFTSQHVAGAAKSAKRKAIEEKREIANRSISEIHELKRQKREKMQQQRAARG------GFDEDMSRAKK------PA---APKARPESAARGGKKDEFVFKEKITN--------LRKQGKKSVNSFKSKTRYNRR 835
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|219122480|ref|XP_002181572.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406848|gb|EEC46786.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 502.671 bits (1293), Expect = 8.373e-166 Identity = 248/465 (53.33%), Postives = 331/465 (71.18%), Query Frame = 0
Query: 307 FSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVD-----VSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVE----------------DTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKE 750
F+QL+LSRPLLR + +G+V PTPIQ AVIP+ LAG+D+CASAVTGSGKTAAF LPILERLL R T+ ++L+PTRELA Q ML+ +Q+T++ L+VGG+KN+ AQ ELR+RPD++V TPGR+LDH+ NS GV+++D+EILVLDE D+L+DLGF EV LVK CP QRQTLLFSATM KVD L L++ RPVRVR+ + ++VAPRLEQEFVRVR +R +LLALL RTFK +T+VF +TKA AHR +L L GIK ELHGNL+Q +RL +L F++G DVL+ATDLAARGLDI + VIN EMP ATYVHR+GRTARAG GG++ +L+ + R MK++++D E ++ ++SR +PP V+ H+ AK+ L+ ++ + EA + R AEME +AQN+++H +EI RP ++WF S+ +K+
Sbjct: 1 FNQLSLSRPLLRGVAAMGFVKPTPIQAAVIPLALAGRDICASAVTGSGKTAAFLLPILERLLHRYS--GRTKAIILTPTRELAAQCLGMLTSFAQFTNLRASLIVGGAKNVNAQAAELRSRPDVIVATPGRLLDHITNSAGVTLEDIEILVLDEADRLLDLGFQDEVHELVKACPVQRQTLLFSATMNTKVDDLIQLSMKRPVRVRISDKANSMDIEVAPRLEQEFVRVRAGNEGANREGMLLALLTRTFKKQTIVFFDTKAAAHRLMILCGLCGIKCAELHGNLSQQQRLTALEEFRKGDVDVLLATDLAARGLDIDRVKTVINFEMPSQVATYVHRIGRTARAGRGGRSCTLIGEGRRHLMKELIKDAEVKNKRHTTGDTAKSSFESGVIRSRTIPPAVMGHFVAKIQSLETHVDEVFQAEAIAKMDRLAEMEVIKAQNIIQHSDEIKARPQREWFASEKQKK 463
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|568044694|gb|ETM41888.1| (hypothetical protein L914_12393 [Phytophthora parasitica]) HSP 1 Score: 516.153 bits (1328), Expect = 9.048e-166 Identity = 280/568 (49.30%), Postives = 370/568 (65.14%), Query Frame = 0
Query: 282 KAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTS 849
KA EFF+ +D Q F+ L LSRP++RAI +G+ PTPIQ IP+ L GKD+CASA TGSGKTAAF LPILERL FR +RV +TRV+++ P RELA Q ML +L+++TD+ L VGG ++AQE ELR RPD+VVCTPGRM+DHL NS V +DDLEILVLDE D+L++LGF EV LV+ CP QRQT+LFSATMT+KVD L L++ RPVR+ D +A L QEFVR+R E+ R AILLAL RTF++ T+VF TK+ AHR ++ L+GIKA ELHGNL Q ERLE+L F++G D+L+ TD+AARG+D+ G+ AVIN EMP+ TYVHRVGRTARAG G+AV+L ++ RL MKQ+ + + VKSR VP PV+A ++A++ +Q ++ + EE E++ R AE EA RA NL++H++EI RPA+ WF S+ EK+ V A ++ A + Q A + TM+ +K K L K+RR+ ++E E ER A EE+G K +K A TS
Sbjct: 202 KAAEFFE--ADPFAAQEFAKTKFETFADLKLSRPIMRAISHIGFEKPTPIQQRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGLP-LKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIR-PNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQKFRDGTVDILLCTDIAARGIDVRGVHAVINYEMPKDITTYVHRVGRTARAGRNGRAVTLTSESRRLVMKQVSRHCK--GFVKSRAVPDPVIAQWKARIESMQEDVKLVMHEETLEKRMREAEKEATRATNLLKHRDEINARPARTWFMSEKEKKNVNERAEEDRRAKEEAAK--------QEAESADTMSRAKKLK-------------LMSHKKRRLFEIRERE-ERMLADAARDEEEGTTKKGKKGAVFTS 741
BLAST of EWM28500.1 vs. NCBI_GenBank
Match: gi|675200695|ref|XP_008909232.1| (hypothetical protein PPTG_14387 [Phytophthora parasitica INRA-310] >gi|566019061|gb|ETI41972.1| hypothetical protein F443_12855 [Phytophthora parasitica P1569] >gi|567956374|gb|ETK81999.1| hypothetical protein L915_12567 [Phytophthora parasitica] >gi|567985056|gb|ETL35406.1| hypothetical protein L916_12476 [Phytophthora parasitica] >gi|568014447|gb|ETL88624.1| hypothetical protein L917_12313 [Phytophthora parasitica] >gi|568090881|gb|ETN05710.1| hypothetical protein PPTG_14387 [Phytophthora parasitica INRA-310] >gi|570322644|gb|ETO70592.1| hypothetical protein F444_12961 [Phytophthora parasitica P1976] >gi|570946459|gb|ETP11716.1| hypothetical protein F441_12813 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 516.153 bits (1328), Expect = 1.096e-165 Identity = 280/568 (49.30%), Postives = 370/568 (65.14%), Query Frame = 0
Query: 282 KAKEFFQELSDDLRIQASGPGGTVLFSQLNLSRPLLRAIEFLGYVNPTPIQTAVIPVVLAGKDVCASAVTGSGKTAAFALPILERLLFRPKRVAATRVLVLSPTRELAVQTHLMLSRLSQYTDMVTCLVVGGSKNMRAQENELRARPDIVVCTPGRMLDHLMNSPGVSVDDLEILVLDEVDQLVDLGFAAEVESLVKECPRQRQTLLFSATMTAKVDALAVLALNRPVRVRVDVSLQVAPRLEQEFVRVRGKGSEEHRHAILLALLARTFKTRTLVFCNTKADAHRTRLLLELSGIKAVELHGNLTQAERLESLLCFKEGKADVLVATDLAARGLDISGIAAVINAEMPRTRATYVHRVGRTARAGCGGKAVSLVPDALRLFMKQIVQDVEDTSTVKSRVVPPPVLAHYEAKVSELQAAIESRLKEEAAERQARWAEMEAERAQNLVEHQEEILQRPAKQWFQSKAEKEAVRTAAAAEKAAAQGNGNGKLSAFGTQRASLSSTMNLTRKEKQALEESAKKKPHRLNRAKRRRMEMLKEEEGERREAVEQSMEEDGELPKKRKLATMTS 849
KA EFF+ +D Q F+ L LSRP++RAI +G+ PTPIQ IP+ L GKD+CASA TGSGKTAAF LPILERL FR +RV +TRV+++ P RELA Q ML +L+++TD+ L VGG ++AQE ELR RPD+VVCTPGRM+DHL NS V +DDLEILVLDE D+L++LGF EV LV+ CP QRQT+LFSATMT+KVD L L++ RPVR+ D +A L QEFVR+R E+ R AILLAL RTF++ T+VF TK+ AHR ++ L+GIKA ELHGNL Q ERLE+L F++G D+L+ TD+AARG+D+ G+ AVIN EMP+ TYVHRVGRTARAG G+AV+L ++ RL MKQ+ + + VKSR VP PV+A ++A++ +Q ++ + EE E++ R AE EA RA NL++H++EI RPA+ WF S+ EK+ V A ++ A + Q A + TM+ +K K L K+RR+ ++E E ER A EE+G K +K A TS
Sbjct: 202 KAAEFFE--ADPFAAQEFAKTKFETFADLKLSRPIMRAISHIGFEKPTPIQQRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGLP-LKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRP-NREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQKFRDGTVDILLCTDIAARGIDVRGVHAVINYEMPKDITTYVHRVGRTARAGRNGRAVTLTSESRRLVMKQVSRHCK--GFVKSRAVPDPVIAQWKARIESMQEDVKLVMHEETLEKRMREAEKEATRATNLLKHRDEINARPARTWFMSEKEKKNVNERAEEDRRAKEEAAK--------QEAESADTMSRAKKLK-------------LMSHKKRRLFEIRERE-ERMLADAARDEEEGTTKKGKKGAVFTS 741 The following BLAST results are available for this feature:
BLAST of EWM28500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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