EWM28490.1, cds2172 (CDS) Nannochloropsis gaditana

Overview
NameEWM28490.1
Unique Namecds2172
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1081811..1085404 +
Alignment locationCM002458.1:1085646..1086110 +
Alignment locationCM002458.1:1086270..1086374 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28490.1
Productdna repair protein rad50
Orig transcript idgnl|cribi|Naga_100058g7.4257.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1081811..1085404 +
CM002458.1supercontigCM002458.1:1085646..1086110 +
CM002458.1supercontigCM002458.1:1086270..1086374 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0016043cellular component organization
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Cellular Component
TermDefinition
GO:0030870Mre11 complex
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR004584Rad50_eukaryotes
IPR027417P-loop_NTPase
Homology
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|585110906|gb|EWM28490.1| (dna repair protein rad50 [Nannochloropsis gaditana])

HSP 1 Score: 2840.45 bits (7362), Expect = 0.000e+0
Identity = 1387/1387 (100.00%), Postives = 1387/1387 (100.00%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
            MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI
Sbjct:    1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|224008570|ref|XP_002293244.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971370|gb|EED89705.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 459/1469 (31.25%), Postives = 758/1469 (51.60%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDDE-QTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETD-ESLQARLVSFAKEHEDVQ--RELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQ-------MGQVQQLMADRNREIVAMCDAYALPLPRTL--AGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQ----EVERARADY----EVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDL--------AP-----------------DLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEA-LQEEFAEKIRKNPEKYP---YRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCC-----------------TTPLDAKGVELLEESLATGIRKWTDKVQKLE---VSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQ---TYSVDGDE-RDLEAVEASL----KSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDA-------LQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
            MA + K+++RG+RSFSP+DE Q I F  PLT+IVG NG GKTTIIE LKYA TG LPPG  + SGQS++HDPK    + VKASIKLRF  R    MVV+RS+++  K  + N  FK L+G+++T++P T +  SL HKC +L+  +P    +S  ILE VVFCHQE+SSWPLQ+GA LKK+FDDIF+S RY KALEAI+  RK  A ++K+L+ DL  L  ++  AS    E E    +I     + +     I   + +  +A++  + ++  +  L  K    E     +A++++ LG  ++ G+   + L+  L   + +H   Q  R L    ++    +K  E  R +   +  ++G+L+A+       + Q  +LM + +++    CD    P   TL  A   S+ S +     G    M    ++  +   +R LS    K++TL    E  K          + E+ +L+AK       ++A +++ + I E   E   EL       +S +S ++Q    E ++  AD     + +    R  +  K +K  E  L+ +A  ++ + K+ + + +   E++E D+ ++  + +   L+ ++ + NS +      H++        +P                 D+N   +A+ +LN K+    A         L Q    L ++       K  A+   AE        AV+K  +++ A L+ +  +      +  P    +F    ++ A+ E+ A+   D++     R  K     L  + K   +C CC                    +D    EL+E  ++   ++ T+ +++ E    ++ ++  +  +      ++K+L    A   E E  +K   +Q+       +SL+E++ +K+++  ++   L+ +  +  T   ++ K  ++  K+++L+    Y+  G+E RDL  VEA L     +  A  TE NR L   Q + +    R+ NQA    AA+    EK    +R QE  + +  L     ++  + K   +   P+R  L Q ++D + ++     EE+       +  +  +GF+        +  K+  ++      +++++E +       ++  E +L  + P+I+ +  + +  ++ +++I++N+   ++  E+   +EE+  L     +   ++A  R L++    +R+++EMK   E +   L   ++  + KL   + K++E+R R   I  ETT + V DL KY+ ALD+AL++YH MKI +INKII+ELW  TY+G DI  I I S +D  GRA RSYNYR+VM KG T +DMRGRCSAGQRVLASIVIRLALAETFC++CGVM LDEPTTNLD+ENK GLA A+A++IA R+ Q NFQL+VITHDEDFV M+K ELS+QTGF+MPE Y+++SRE    GR YS I A +W
Sbjct:    1 MASISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPG--NKSGQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATAN--FKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGFREEYEECKDKISGFDDEIDRCSKNIEEAKKKHNEAKKIQLAIEEFMSDLDMKRGEFEREEAVLAKQRELLGPDDLTGQYSMDELRGMLRELSDKHHGNQAVRALHDKEEEFEGIEKFLEGLRKKTNDLNSRKGKLEAEKDAHNVVLKQRFKLMEEIHKKHGVECDVTQTPDDDTLTQATAASRMSHSTVFTSGTGTTMDITISQEDIAAFERGLSQ---KEQTLRNTWEGAKRRHRNEEDAMQKEIADLQAK-------RSAVESDRRRINESKLEAMRELQAVGNQMSSAISRVRQSDVDEAKKQAADLARTRDELNNGSRRDDIAKEIKVQEDKLKSIASRIEQDMKIRKVLNDQKNEQSEIDMLEKQVSDEFLGLK-DMLKDNSYVLSEHGEHNVTVTTEDPVSPVEVAANNIRRKHLDAEDDVNRANEAIADLNGKIAEKRAV--------LSQNNGRLQQL-------KNRANQLNAE------GGAVQKVNNVVSAILRSDLYDPDLITADSKPSEIMQF----LQDAISELSAI---DVKPEVVSRILKP----LKKKGKTDASCPCCLRDFVDMDETTRFMNQMNALVDPDTSELME-MISKKNKESTESLERFEKWRTAIAQNINECIEYTGVNNEIKDLEAFIA--AEGEGELKDLQDQD-------QSLKEKLSEKQKEASSLRTLLASLNTILDTARRIWTKEGQVKEKKEKLKYAFGYADLGNETRDLNTVEADLTKSNDAKEAAYTEINR-LNGEQKDINDKISRVTNQAA---AADRNAREKQDAFTRDQEASKRRDELNQLLGKLGDDDKELEKSLAPIRTHLLQKESDRDRMRTANGYEES-------KLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENADAIKDEEAKLVSMKPEIEQLKKQVDDSERQKQKIQNNIDVLKLQKEVNDMEEEIGKLEDDAKDMGGEDAA-RILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEERHRVKMIEYETTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITNIQITSDQDKAGRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMALDEPTTNLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQTGFNMPERYYQVSREEGHDGRFYSKINAIDW 1400          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|953494117|emb|CEG43711.1| (dna repair protein rad50 [Plasmopara halstedii])

HSP 1 Score: 562.377 bits (1448), Expect = 3.698e-173
Identity = 454/1446 (31.40%), Postives = 732/1446 (50.62%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLG-CQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNEL----------HRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSH-----EFRTKKGFCELLIDQSKEANTCMCC---TTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERM-------------KLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTG-MSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQA--ELVRAAETALEEKVKMMSRSQEL-----------EQEK------TRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRV-------DENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGE-DGG-GRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQT-GFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
            M+ +EK+++RGIRSFSP+ E+ IEFY PLT+++G NG GKTT+IECLK ACTG LPPG  + SGQS +HDPK+    EVKASI+LRF+ R GK M++ R+ Q++   K+   TFK L+GVI+ +N + +K  SL HKC +L+  +P    +S AILESV+FCHQEES+WPL++GA LKK+FD+IFESARYTKALEAI K +K R +  K+ + DL  L+ +R+TA DI  ++ER   ++Q++  K +     I   +  L + ++   EVK +   L  +E  VE + ++V   + + G  +++  +TDE LQ+ L  +    ++  +  +RL+++    K   E  + E   +   +  ++  +   Q+L+AD       +   Y   L + L+      SG                          FL  F+   +     + +   ++ +   +   E+ EL +++         ++ ++ +++ + T I N L           R A    S L+  ++ +   RA   V+A K     F   + ++ + + ++  +++        ++  ++E T  +V + +H  K E  +A +    + +   F   +   D NT+  A+++++++ I      +  +   LV A Q L E  T+    ++E ++  +  + LE R  + + + +L+ +          NP  +  +  +  I+ A R      D  +R  +         KKG  E         + C  C    TP +A+  E +  S  T  +K  +K+++ E       Q L       T++KE IP   K  E+E  +             + A E + K + +   L +E V+  R  K   E L +    +  T   L K+ E +   +        D        VEA   + +A   + N  LQ  Q E        IN    +L     +  EEK +M ++ +E            EQEK       +LKA + E+E +++  T E    R   ++   D    ++ L   + D Q    +C Q  QG      +L   E++A     +    AQ + ++D       L ++ PQI++        + ++RQI DN+ YR +  ELE  + E   L+ +V       D N+   +   AL+  ++ +     MK + +  ++ +    +E++ +LR   LK++E+++R+  I  ETT +AV DL +Y+KALD +L+QYH  K+EEIN IIR LW  TY+G DI+ I +VSG+ DG   +A RSY+YRV+MKK    +DMRGRCSAGQ+VLA++VIRLALAETFC++CG++ LDEPTTNLD ENK GLA AI  +++ RS+QQNFQL+ ITHDE+FV M+ +   TQT   S PE+YWRI RE   G R  S I+  EW
Sbjct:    1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPG--ARSGQSLVHDPKIAGTNEVKASIRLRFRNRAGKVMLIHRTFQVRQTKKA--ITFKALDGVIRVVNELGEKV-SLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARMDNAKDYKRDLDILSAHRKTAEDIRDKIERAQEKLQEVTEKGDEANHEIVKAKKTLEELQQLQDEVKKLHAQLERREEDVERKQQSV---RTAYGKIEKIMNDTDEELQSSLNDYDAIIDEHHKAFSRLQEQAERLKDEQEKVKQEYVALCASKARVETNIDTYQKLVADLIDSASKLSTKYRFHL-QPLSSQPEDVSG--------------------------FLDAFKNVVKDKHDAVNSLDVKQRQDDDKMTTELLELSSQVKHLRDDLATKKQKLADLKREKTVIANRLRELGGAGIHSQRDAEEMTSQLAKTEKTIAEYRAKNNVMALKDEIHGFNLRINDINRVMDDLGQQIN-------QLRLRARENTAIEVKRSEHRKKEEVFQATLFEKVADVEDIFEGGEKPKDRNTLLTAISDIDSR-ITERKRCLDAKKSELVSAEQHLMENATSSKLVEKELNLMRSTKNQLE-RQHMTRLKELLDKI----------NP-GHDLKSAELGIKEAERAYADAKDKVVRRKNMVMFLNIYKKKGLKE---------HCCPLCERDMTPAEAQAFESILSS-KTDDKKVANKIKEAEELEKSWLQTL-------TEIKEKIPSWRKWLELETTILDKVKELEVVYSAQKALEIDVKDKKAAFDLAQEQVEDARTAKFEMEILCKTANELYHTDIALRKEEERMGGSQGSSGRSLSD--------VEAEKDAKQAQVQDLNHQLQRKQKELDH-----INDTLQQLQNDLLSRKEEKFRMETQRKEYDEAVREQNRLREQEKALKDAYNQLKASEPELERKLRKKTSEREMRRTEARE---DLRAQRLELQERQGDFQVFSAKCKQVEQG------ELAKLERQA---HTLSDNIAQTKHRED--AAIQSLTDLTPQIKIAEEVLSKNEIVKRQIHDNLDYRELQKELETLRIEAEDLKHQVGNLPLLDDVNDRVASASAALNMAEHSFA---VMKGKRQQLMEDI----RERKVQLRVPTLKDVEEKYRHKLIQFETTQMAVADLDRYYKALDESLLQYHSKKVEEINTIIRSLWQITYKGQDIDTIELVSGQLDGAVSKAARSYDYRVMMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILSARSQQQNFQLVCITHDEEFVQMLSR---TQTIEGSRPEFYWRILRENIGGDRFVSKIERREW 1337          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|695370553|ref|XP_009514339.1| (hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae] >gi|348687250|gb|EGZ27064.1| hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae])

HSP 1 Score: 556.984 bits (1434), Expect = 5.549e-171
Identity = 472/1455 (32.44%), Postives = 742/1455 (51.00%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTK--EMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKE----TTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEK-FTEITNEL-----HRQAAVPASVLSSMQQEVERARADY----EVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHI--LEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREV-QAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCT------TPLDAKGVE-LLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDF------KRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETAL----EEKVKMMSRSQEL-----------EQEKT------RLKARQCEVEAEVKLATEEEIPLRQA-----------LKQYQADFETLKVRLDAEEADKQRKVIECMQRYQG-FDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYR---DAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGG--GRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQT-GFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
            M+ +EK+++RGIRSFSP+ E+ +EFY PLT+++G NG GKTT+IECLK ACTG LPPG  + SGQS +HDPK+    EVKAS++LRF+ R GK MVV RS Q+  +   KN TFK L+GVI+ +N + +K  SL HKC +L+  +P    +S AILESV+FCHQEES+WPL++GA LKK+FD+IFESARYTKALEAI K +K R +  K+ + DL  LT N  TA  I  ++E    ++++   + +  E++I   +  L++ ++   EV+ +   L  +  +++V+E++   A  K     + +  ++DE LQ  L  +    ED +R    L+ +E        K+ E+Y A    +   +  ++  +   Q+++AD       +   Y   L         Q   +++ D+      S   AE        F +  + KQE ++  L+A + ++   LT + +E+T    K L +E     R  E  N E++  T    EL     H Q    A  +SS   E E++  DY    +V+A K     + + + ++   +  +  ++ G+ +++ S      + +E +  + D+  K E  +A ++   +         D   D +++  AV  +++ LI     +  T+   L  A + L E  T+       + +   E+D L ++    + +H+  L+AL E+        P +     D R+ E  ++E  QA  D    +  +   +K     L    K+     CC       TP + +  E +L +    G  K  DK++K E  L R   +        T +K+ +P   K  E+E  +     +  +  A+ ++LE  ++ K+   + ++E         +    L K  +EL        + +R++     G  R L  VEA   + +A   E NR +Q  Q E       + +  E+++  +  L    EEK++M ++ +E            +QEKT      +LK  + E+E EV+  T E    R A           L++ Q DF           +DK      C Q  +G  + L+ ++Q        T+  E  A Q+            L ++ PQ++         + ++R I+DN+ YR +  ELEK + E+  L+  V       AL+   D+V++       A+E +     +   L A  +E + +LR   LK++E+++R+  I  ETT +AV DL +Y KALD +L+QYH  K+EEIN IIR LW  TY+G DI+ I +VSG + G   +A RSY+YRVVMKK    +DMRGRCSAGQ+VLA++VIRLALAETFC++CG++ LDEPTTNLD ENK GLA AI  ++  RS+QQNFQL+ ITHDE+FV M+ +   TQT   + PEYYWRISRE   G R  S I+  EW
Sbjct:   30 MSSIEKLSIRGIRSFSPNREEIVEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPG--ARSGQSLVHDPKIAGTNEVKASVRLRFRNRAGKAMVVQRSFQV--RQTKKNLTFKALDGVIRVVNELGEKV-SLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLKEGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMRTAEGIREKIELAQEKLREATEEGQEAEEKIAQAEVTLKELQQLQEEVRKLHTQLQRRQEDVVVKEQSVRSAYGK----IENIMNDSDEELQGFLNDYDGIIEDHRRAFGALKAQEARLQVEQNKSKEDYVA----LRASKARVETNIATYQKMVADLIDLAAKLGTKYRFHL---------QPLSSQQDDI------SAFVAE--------FRNVVKDKQEEVN-SLDAKQRQEDDKLTTELSELTS-RVKQLRDELNSKTRSLETLNQEKRALTSRLRELGGAGVHSQR--EADEMSSQVTEAEKSLEDYKQKNDVMALKSEIQGYNRQINDINDVIDALGQQI-GQLRLYAS------KNSEIEFKRNDYLKKHEAFQATLSEKVADFEEILEGGDKPTDRDSLASAVGRIDS-LIVERKRSCDTKRMELAAAEKRLMENTTS-------SKLAEKELDSLRQKKNELERQHMTGLKALLEKVI------PGE-----DLRNAELGVKEAEQAYAD----AKDKVVRRKNMVMFLNIYKKKGIKDHCCPLCERDMTPEEEQAFEAILSDKTDDG--KVADKIKKAE-ELERSTLE------TLTGIKQQMPSWRKWLELETTIPQKVNELQEIYAAQKALENGVLDKKTALELIQEKFEDAKVAKTELDSLRKTADELHMSDMTITREERMKASQGMGG-RSLADVEAEKDAKQAELQELNRQVQRKQRE-------LDHTNEILQQLQNDLHNRREEKLRMETQRKEYDDAIKEQNRLRDQEKTLKDACSKLKKSEPELEHEVRSKTTERETHRAAAREQMRAQRTELQERQGDFRVF--------SDK------CKQVQRGELEKLEREVQTLSDNIAHTKQREDTAIQS------------LADLVPQMKSAEKNLSKNEIVKRHIQDNLDYRALQKELEKLRAEVEDLKATVG---NLPALDDVNDRVESASMALIAAKESRAVVSGKKQQLMAQIRENKVELRVPNLKDVEEKYRHKLIQFETTQMAVADLDRYFKALDESLLQYHSRKVEEINTIIRSLWQITYKGQDIDTIELVSGHEQGVTAKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSR---TQTMDGTRPEYYWRISREDIGGNRFVSKIERREW 1365          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|632967778|ref|XP_007900169.1| (PREDICTED: DNA repair protein RAD50 [Callorhinchus milii])

HSP 1 Score: 486.878 bits (1252), Expect = 2.068e-145
Identity = 427/1417 (30.13%), Postives = 725/1417 (51.16%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDD--EQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSL--GCQEMEGETDESLQA---RLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFD---DRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEAN--TCMCC--TTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQ------LADLRACATDVKE--LIPLRAKLCEVE---ERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETN-RHLQETQAEQSKAAKRMI-NQAELVRAAETALEE----KVKM---MSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQ--DWEKKALGTQLVEL-----EAAQARLKQ---DLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENE--EKEALERALDKVQNQYRDAREMKI-RNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGED---GGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISR 1367
            M+ +EKM+++G+RSF  DD  +Q I F +PLT++VG NG+GKTTIIECLKY CT   PPG   T G +++HDPK+  +T+V+A I+L+F+  +G+ + V +SL    KGK     FK LEG+I  +    K S  L  KC +++  +  A  +S A++ +V+FCHQE+S+WPL +G TLK+KFDDIF + RY KALE + + R+ +A+ ++  + +L  L +N+E A +I  +L  K  ++   +   +++E++I+ L+ RL + +++L +V           + V+   +A+  +KK +    Q++E + ++  Q    +L+   + H+    E TRL    T  ++  E      Q++  Q+ ++  + G++Q L+ADR +E V   DA    L RTLAG L   SG ER    +R            VE +  +    G Q  L  E       K R + + R + T LE  +         +Q E+ ++     ++     R   +    L   ++E+ERA AD  V   +      +K    L+++LR++  E+       E++  ++  RTE +V+++D  +K E++    +R N  +    L H   P+   ++                 + T+A+ +  +R++LT++  + A  ++  +  +AE+   E++ A             ++ EK+          F+    +D E  L ++Q  +D   +               I Q  E N   C  C    P +A+  +++ + L + +R   DK++  E  L R +++      L  +R   T++ E  L  LR KL  +    +R+K   E+    +A+  S E           + ++CL  ++ M     EL       D +RK  Q  +       L+ V+ S    +  Q +   +H  ET + + +  +++I +Q EL+++ +++L E    K+++   M R Q+LE++   L      +  +++ A E+  PL  AL++       LK +LD  E    +K   C +  +  + ++ K++  DW  K +   + E      E  ++ L++    L  VE Q E+I   I+      + +    R ++DN+T R+ + EL   + +   L +++ E +  + +   R LD+   Q +D R +   R +   + +   ++E    L+  + K+ E++FR + I   TT LA  DL  Y+KALD+A+M++H MK++EINKIIR+LW  TYRG DIE I I S  D     G   R+YNYRVVM KG T LDMRGR SAGQ+VLAS++IRLALAETFC++CG++ LDEPTTNLD EN E LA A+  +I  RS Q+NFQL+VITHDEDFV+++ +           E+++R+ +
Sbjct:    1 MSKIEKMSIQGVRSFGIDDRHKQVITFSTPLTVLVGPNGAGKTTIIECLKYICTSDFPPG---TKGNTFVHDPKVAHETDVRAQIRLQFRDVNGETVAVQKSLLCTQKGKK--IEFKTLEGLITRLRHGEKIS--LSSKCAEIDREMISALGVSKAVINNVIFCHQEDSNWPLSEGKTLKQKFDDIFSATRYIKALETLRQVRQKQAQRVRECQGELKYLKQNKEKAHEIRDQLTNKETQLAASKENVQSIENQIDPLENRLLEIDQSLAKV-----------IKVDNEIKALESRKKQMEEDNQDLEMKMEQVFQGTDEQLIDTYQNHQRTVSEKTRLV---TDRQRELERVNQRCQKLNRQKSDMLVEQGRLQ-LLADRQQENVKRRDA----LVRTLAGQLD-LSGYERPPFSDRQYHGFRQQ----VEERLKIEQEAGNQ--LVNEFTEKDAAKQRQIDKVRDKKTGLERTIDLKLDIHRKKQLELNSVNVDLQQLEGSSDRLQELDQE-LKKAERELERAEADSNVEGLRAEVTALQKEKGELDRSLRKLDQEM-------ETLSFHTVTRTEMEVSKKDKANKEEQIRKIKSRHNDELV-ALLGH--FPNKKQLE---------------DWIHTKANEINSSREKLTKMTKDLASAEQNKNHTSAELKKKEQQLA-------------QYEEKL----------FEVCGGQDFESDLYKLQDDIDKTSKQRAMLSGATAVYTQFISQLTEDNEPCCPVCQRIFPSEAELQDIVND-LQSKLRLVPDKLKATESELKRREKRRDEMMGLKPVRETVTELNERDLPELRNKLQNIIRDIQRLKCDVEEQETLQAAFISEE----------GSAKQCLQDISLMDRYQMELR------DVERKIAQQAA------KLQGVDVSRTMQQVNQEKQEMQHKLETVSSRVELKRKLIQDQQELIQSLKSSLNEVRAEKLQIASNMQRRQQLEEQSVELATEIESLHRDIREAKEQLSPLAAALEKL------LKEKLDLME----KKTASCKEIQEKINDVKEKVKNIDWFAKEIQRYIQEKKDEFKEQKESELQETVTQLNEVEKQREKIQRDIEAFRKDIDTQKLEERWLQDNLTLRKRVEELRGVEAKRQDLLQQIGEMQVMQLKNERRQLDEKLEQLKDNRSLAHGRQKGFEEEILRFRKE----LKEQQYKDAEEKFREMMITIRTTELANRDLDIYYKALDQAIMKFHSMKMQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVTAGDKRRNYNYRVVMVKGDTPLDMRGRYSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSNQRNFQLVVITHDEDFVELLSRS-------QYVEHFYRVKK 1291          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1159662289|gb|OPJ87917.1| (DNA repair protein RAD50 [Patagioenas fasciata monilis])

HSP 1 Score: 469.159 bits (1206), Expect = 6.601e-139
Identity = 414/1418 (29.20%), Postives = 711/1418 (50.14%), Query Frame = 0
Query:    1 MAGLEKMALRGIRSFSPDDE--QTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSE--SLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVE---VKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERA--RADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYR----FD---DRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMC--CTTPLDAKG-VELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVE--------ERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQ-TETNRHLQET-----QAEQSKAAKRMINQAELVRAAETALEEKVKMMS---RSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDE-------NEEK------EALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRAT---RSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRIS 1366
            M+ +EKM++ G+RSF  +D+  Q I F+SPLT++VG NG+GKTTIIECLKY  TG  PPG   T G S++HDPK+ ++T+V+A I+L+F+  +G+ + V RS+    KGK     FK LEGVI      TK  E  SL  KC +++  +  A  +S ++L +V+FCHQEES+WPL +G  LK+KFD+IF + RY KALE + + R  ++ ++K  + +L  L +N+E A +I + L  + A++   +   +++E ++  L++ L   E+ LV+   +   ++AL ++   +E+    + +K K +     +G TDE L+ R       +++ QR +    ++ +  K+  +    E QR   ++ EL  + G++ QL ADR++E +   D+    L ++LA  L +  G ER  +  R    HV A   V+  +R   D +     L RE    +  K + +   R + T LE  +      +  +Q E+KN++ +  ++     R   +   ++ + + E+E+A   +  E +  + R ++ EK   NL+KTLR++  E+       E +  ++   T+ ++ ++D   K E++    +R +  +    L +   P+ N ++  +   N K+                           NQ RD          +  L KR A       +E  +   + ++R+  E+        FD    +D +  L ++Q  ++   +               I Q  E N   C  C      +  ++ +   L + +R   DK++  E  L R +Q+  ++ +       L PLR  + E++         +++ AN      +  +   E ++     +++  + CL  +T M    A++       D +RK      V   E  L  V+ S   L+ +Q  +  +HL +T     +  Q     +     +L  A      EK+++ S   R ++LE++   L      +  E+K A E+  PL   L++ Q + E L  +  A   + Q K+    ++ +  +    +++++ ++       + EA    +K  L   E Q E+I+ +++ +    + +    R +EDN+T R+   +L++ ++ +  L K + E       NE+K      E+L+R  D    + R   E  +R               + +LR  + ++ ++++R + I+  TT L  +DL  Y+KALD+A+M +H MK+EEINKIIR+LW  TYRG DIE I I S  D    A+   RSYNYRVVM KG T LDMRGRCSAGQ+VLAS++IRLALAETFC++CG++ LDEPTTNLD EN E LA A+  +I  RS+Q+NFQL+VITHDEDFV+++ +    +T + + +  ++ S
Sbjct:    1 MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG---TKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKK--TEFKTLEGVITR----TKHGEKSSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKENVKSIESQLEPLKSSLAAVEQNLVKAMRLDNDVKALESRRRQMEKDNEDLQQKMKKV----FQG-TDEQLRDR-------YQNHQRTVNEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRL-QLQADRHQEHITTRDS----LIQSLAAQL-ELDGFERVPLSER----HV-ANFHVLLKERQERDAEAANH-LMREFARKEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQEIVKT-EHELEKAERNSSVEKLELEVRTLQNEKI--NLDKTLRKLDQEM-------EQLNLHTATITQMEILKKDKADKEEQIRKIKSRHSDELT-SLLGY--FPNKNQLEDWLHSKNKKI---------------------------NQTRDN---------LGKLNKRLAS------VEYDKSHASSELRRKEEQLSLHEAQIFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKRKEQKRDEMMS-------LKPLRQTVVELQNTDIPGLRNKIQNANRDLVSLKGEIEEQESQLQTALSEEEGAKACLQDITLMERYQADIR------DCERK------VAQQEAKLLGVDLSRSVLQVSQEKQEKKHLWDTVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQLSSSVQRRRQLEEQTVELTTEVQSLCREIKEAQEQVFPLDATLEKLQQEKEDLMNKRTASNKEAQEKISVIKEKVKDINKYVKEIENYIQQRKDDYKKQKEAELEEVKSQLAASEKQKEKISKEMETIRQDIDTQKIQERWLEDNLTLRKRNEDLKEVEDNIKQLVKEMGEMKVPQMKNEQKRLEEKIESLKRNHDVALGRQRGFEEEIVRF--------------KKELRESQFRDADEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIYQCS 1297          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1210511674|dbj|GAX29488.1| (DNA repair protein RAD50 [Fistulifera solaris])

HSP 1 Score: 311.612 bits (797), Expect = 2.354e-83
Identity = 217/623 (34.83%), Postives = 336/623 (53.93%), Query Frame = 0
Query:  779 DKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCE-----VEERMKLANEQ---NAKWRASVRSL---EEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTY---RRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
            D   +L  +L + +    DL A   D++EL  +  + C+      E+RM +  +Q   N     + R L   E ++ KK  +K   EE  S+++ +  T   +  K   L    +R++  + D +E+                           +E+ K A R +  ++L+R     L E+ K+    ++L   K+++ A++ E         +EE  L +AL  ++AD   LK          Q ++I+                 +E      Q  E+EA   R+  ++     +   +   +    +  + +D+ ++Q+  N+T     R +++LE+EK EL    ++    E   +L   L+  + +    +E+K R E R   L    +  + KL S + K+I++R R   I   TT+LA EDL+KY+ A+D+AL+ +H +KI EINKIIRELW  TY+G DI  I IVSG++ G +A +SYNYRVVM KG++ +DMRGRCSAGQRVLASIVIRLALAETF I  G + LDEPT NLD++NK+GLA A+A+++A RS+Q+NFQL++ITHDEDFV M+K ELS+ TGFSMPE Y+++ RE A  G+ YS I A +W  +
Sbjct:  841 DDCNRLRDTLKKQEGYKLDLEADDRDLRELFDMAKRWCDDGTKIAEKRMSIFQKQLDLNTSLPETGRDLKTVERDIAKKSEEK---EETASKISSLLKTQQAMMNKISSLSGLAQRMEQLARDKEEK--------------------------FSEERKNADRKVELSDLIR---NILGEERKL---QEQLAPLKSKVSAKESEQGKMRASGEQEEERLIEALGLFKADLAELK--------KTQEEIIK-----------------YELSNPEDQKQEIEAKMKRVADNISAKRKEANVVIGDLNKRKSSLQDQDRKKKQLVHNITIIESTRKVADLEREKREL---ERKTQGLESISSLFEKLNAAEARKAKEQELKFRTEGRWSELVEQIRTLKRKLASPEYKDIDERCRKTTIEHTTTLLAAEDLKKYYSAIDKALLMFHGLKIAEINKIIRELWMLTYKGEDITNIEIVSGQETGLKAGKSYNYRVVMTKGSSEMDMRGRCSAGQRVLASIVIRLALAETFGICVGSLALDEPTVNLDYKNKQGLAIALAQIVASRSQQRNFQLVLITHDEDFVSMMKTELSSMTGFSMPEKYFQVRREKAIDGKYYSKIDAVDWDDL 1400          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|673027550|ref|XP_008867736.1| (hypothetical protein H310_04952 [Aphanomyces invadans] >gi|574476509|gb|ETW03507.1| hypothetical protein H310_04952 [Aphanomyces invadans])

HSP 1 Score: 306.605 bits (784), Expect = 6.314e-82
Identity = 208/556 (37.41%), Postives = 310/556 (55.76%), Query Frame = 0
Query:  857 LSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEA-VEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKV----IECMQRYQGFDALQCKLQDWEK--KALGTQLVELEAAQARLKQDLQG-----------VEGQLEEIAPQIQVV---ANRSEGK----DQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGED-GGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGT 1386
            L+QV    +    + K  E+++F  ++L T      ERDL + +  SL S   T TE    L+  Q    +   ++ N+ + +  A    E  +++     ++ ++K  L  R  E+E     A ++   LR  L++ Q D  T +      + + Q KV    I  MQ  Q  D  + +L   ++  + + T+  E+E  Q   KQ+ +G           +  Q E I+ +I V+    NR+       +  +RQI DN+ +R++   ++K KE++A+ +++VD+ +     E A          A+E + +   + D L  + +E QA+L    LKNI+++ R+  I  ETT++AV DL KY+KALD +LM++H  KIEEIN IIR LW  TYRG DI+ I IVSG D G  ++ RSYNYRVVM+K + +LDMRGRCSAGQ+VLA +VIRLALAETFC++CG++ LDEPTTNLD  NK GLA AI+ ++  R +QQNFQLI ITHDE+FV M+ +  S   G S PEY+W +SRE        S I    W +
Sbjct:  798 LAQVVEGCAMLKSVRKNHEQVEFDSRKLATL-----ERDLISRLADSLGSNPPTMTEAQGVLEAMQVNCRELETKLKNKQKEIHMAS---EAHMRLQGEVNKVREDKHILNQRNNELEK----AKDQRDLLRATLRKLQDDLATSQRDFPGVQRELQIKVNERDISRMQLKQAMDVKRSELTQCQQDMQLVKTKHEEVEQLQ---KQNDEGKLQELEQELQLLNAQSERISREIAVLQPEKNRARSSLSETESFKRQIRDNIQFRQLRDNVDKAKEDIAVFKRKVDKFKSTAEAENACRVANQTLSAAKEARAKLAGKQDNLQELVREVQAQLAHRDLKNIDEKKRHKFIEYETTVMAVSDLDKYYKALDLSLMEFHSRKIEEINAIIRSLWQITYRGQDIDTIEIVSGHDTGDSKSKRSYNYRVVMRKDSAVLDMRGRCSAGQKVLAGLVIRLALAETFCLNCGILALDEPTTNLDTANKLGLAQAISDILIAREKQQNFQLICITHDEEFVQMLNR--SQMLGGSRPEYFWTVSREEIAPRYFVSKIDKRPWSS 1336          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1210514762|dbj|GAX26241.1| (DNA repair protein RAD50 [Fistulifera solaris])

HSP 1 Score: 304.679 bits (779), Expect = 3.237e-81
Identity = 143/245 (58.37%), Postives = 186/245 (75.92%), Query Frame = 0
Query: 1140 REMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
            +E+K R E R   L    +  + KL S + K+I++R R   I   TT+LA EDL+KY+ A+D+AL+ +H +KI EINKIIRELW  TY+G DI  I IVSG++ G +A +SYNYRVVM KG++ +DMRGRCSAGQRVLASIVIRLALAETF I  G + LDEPT NLD++NK+GLA A+A+++A RS+Q+NFQL++ITHDEDFV M+K ELS+ TGFSMPE Y+++ RE A  G+ YS I A +W
Sbjct: 1130 QELKFRTEGRWSELVEQIRTLKRKLASPEYKDIDERCRKTTIEHTTTLLAAEDLKKYYSAIDKALLMFHGLKIAEINKIIRELWMLTYKGEDITNIEIVSGQETGLKAGKSYNYRVVMTKGSSEMDMRGRCSAGQRVLASIVIRLALAETFGIHVGSLALDEPTVNLDYKNKQGLAVALAQIVASRSQQRNFQLVLITHDEDFVSMMKTELSSLTGFSMPEKYFQVRREKAIDGKYYSKIDAVDW 1374          
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|698810388|ref|XP_009838223.1| (hypothetical protein H257_12631 [Aphanomyces astaci] >gi|574107026|gb|ETV72541.1| hypothetical protein H257_12631 [Aphanomyces astaci])

HSP 1 Score: 297.36 bits (760), Expect = 8.427e-79
Identity = 213/574 (37.11%), Postives = 306/574 (53.31%), Query Frame = 0
Query:  837 RSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEA-VEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIEC-MQRYQGFDALQCKLQDWEKKALGTQLVEL-------------EAAQARLKQDLQGVEGQLEEIAPQIQVV--------ANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSG-EDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGT 1386
            R+LE ++ +     +  E  LSQV         L K  ++++F  K+     V   ERDL + +  SL S   T +     L+  Q +      ++  +   V AA  AL   +++      + +EK +L  R  ++E     A ++   LR  L++ Q +  T +  + + + + Q KV E  + R Q  DA+  K  +        QLV+              EA    L Q+LQ +  Q E I+  I ++        ++ SE  +  +RQI DN+ +R++    +K KE+L   ++++D        E A          A+E + +   + D L    +E Q +L    LKNI+++ R+  I  ETTM+AV DL KY+KALD +LMQ+H  KIEEIN IIR LW  TYRG DI+ I IVSG E G   + RSYNYRVVM+K + +LDMRGRCSAGQ+VLA +VIRLALAETFC++CG++ LDEPTTNLD  NK GLA AI+ ++  R +QQNFQLI ITHDE+FV M+ +  S   G S PEY W +SRE        S I    W +
Sbjct:  780 RALELDLTQTRLVVQQNEAKLSQVVEGWDLLKALKKSYDQVEFDAKK-----VAASERDLASRLADSLGSNPPTMSMAQEALESMQTKCRDLETKLKQKQAEVHAASDAL---MRLQGEVHRVREEKHQLNQRNIQLEK----AKDQRESLRAKLRKLQEELATAQRDVPSVQRELQIKVNEREISRLQLKDAIDAKRAELTSCQQDLQLVQRKHEEVDEMQKQNDEAKLHALDQELQQLHAQSERISRDIAMLQPEKTRARSSLSET-ESFKRQIRDNIQFRQLRDAADKAKEDLEAFKRKMDTFRSVAEAENACRVASETLNAAKEERAKLAGKQDNLQENVREVQVQLAHRDLKNIDEKKRHKFIEFETTMMAVSDLDKYYKALDMSLMQFHSQKIEEINAIIRSLWQITYRGQDIDTIEIVSGHESGDSNSKRSYNYRVVMRKDSAVLDMRGRCSAGQKVLAGLVIRLALAETFCLNCGILALDEPTTNLDSANKLGLAQAISDILIAREKQQNFQLICITHDEEFVQMLNR--SQMLGGSRPEYLWTVSREEIAPRYFVSKIDKRPWSS 1338          
The following BLAST results are available for this feature:
BLAST of EWM28490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110906|gb|EWM28490.1|0.000e+0100.00dna repair protein rad50 [Nannochloropsis gaditana... [more]
gi|224008570|ref|XP_002293244.1|0.000e+031.25predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|953494117|emb|CEG43711.1|3.698e-17331.40dna repair protein rad50 [Plasmopara halstedii][more]
gi|695370553|ref|XP_009514339.1|5.549e-17132.44hypothetical protein PHYSODRAFT_293155 [Phytophtho... [more]
gi|632967778|ref|XP_007900169.1|2.068e-14530.13PREDICTED: DNA repair protein RAD50 [Callorhinchus... [more]
gi|1159662289|gb|OPJ87917.1|6.601e-13929.20DNA repair protein RAD50 [Patagioenas fasciata mon... [more]
gi|1210511674|dbj|GAX29488.1|2.354e-8334.83DNA repair protein RAD50 [Fistulifera solaris][more]
gi|673027550|ref|XP_008867736.1|6.314e-8237.41hypothetical protein H310_04952 [Aphanomyces invad... [more]
gi|1210514762|dbj|GAX26241.1|3.237e-8158.37DNA repair protein RAD50 [Fistulifera solaris][more]
gi|698810388|ref|XP_009838223.1|8.427e-7937.11hypothetical protein H257_12631 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2180rna2180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications