EWM28490.1, cds2172 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|585110906|gb|EWM28490.1| (dna repair protein rad50 [Nannochloropsis gaditana]) HSP 1 Score: 2840.45 bits (7362), Expect = 0.000e+0 Identity = 1387/1387 (100.00%), Postives = 1387/1387 (100.00%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI
Sbjct: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|224008570|ref|XP_002293244.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971370|gb|EED89705.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0 Identity = 459/1469 (31.25%), Postives = 758/1469 (51.60%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDDE-QTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETD-ESLQARLVSFAKEHEDVQ--RELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQ-------MGQVQQLMADRNREIVAMCDAYALPLPRTL--AGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQ----EVERARADY----EVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDL--------AP-----------------DLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEA-LQEEFAEKIRKNPEKYP---YRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCC-----------------TTPLDAKGVELLEESLATGIRKWTDKVQKLE---VSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQ---TYSVDGDE-RDLEAVEASL----KSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDA-------LQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
MA + K+++RG+RSFSP+DE Q I F PLT+IVG NG GKTTIIE LKYA TG LPPG + SGQS++HDPK + VKASIKLRF R MVV+RS+++ K + N FK L+G+++T++P T + SL HKC +L+ +P +S ILE VVFCHQE+SSWPLQ+GA LKK+FDDIF+S RY KALEAI+ RK A ++K+L+ DL L ++ AS E E +I + + I + + +A++ + ++ + L K E +A++++ LG ++ G+ + L+ L + +H Q R L ++ +K E R + + ++G+L+A+ + Q +LM + +++ CD P TL A S+ S + G M ++ + +R LS K++TL E K + E+ +L+AK ++A +++ + I E E EL +S +S ++Q E ++ AD + + R + K +K E L+ +A ++ + K+ + + + E++E D+ ++ + + L+ ++ + NS + H++ +P D+N +A+ +LN K+ A L Q L ++ K A+ AE AV+K +++ A L+ + + + P +F ++ A+ E+ A+ D++ R K L + K +C CC +D EL+E ++ ++ T+ +++ E ++ ++ + + ++K+L A E E +K +Q+ +SL+E++ +K+++ ++ L+ + + T ++ K ++ K+++L+ Y+ G+E RDL VEA L + A TE NR L Q + + R+ NQA AA+ EK +R QE + + L ++ + K + P+R L Q ++D + ++ EE+ + + +GF+ + K+ ++ +++++E + ++ E +L + P+I+ + + + ++ +++I++N+ ++ E+ +EE+ L + ++A R L++ +R+++EMK E + L ++ + KL + K++E+R R I ETT + V DL KY+ ALD+AL++YH MKI +INKII+ELW TY+G DI I I S +D GRA RSYNYR+VM KG T +DMRGRCSAGQRVLASIVIRLALAETFC++CGVM LDEPTTNLD+ENK GLA A+A++IA R+ Q NFQL+VITHDEDFV M+K ELS+QTGF+MPE Y+++SRE GR YS I A +W
Sbjct: 1 MASISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPG--NKSGQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATAN--FKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGFREEYEECKDKISGFDDEIDRCSKNIEEAKKKHNEAKKIQLAIEEFMSDLDMKRGEFEREEAVLAKQRELLGPDDLTGQYSMDELRGMLRELSDKHHGNQAVRALHDKEEEFEGIEKFLEGLRKKTNDLNSRKGKLEAEKDAHNVVLKQRFKLMEEIHKKHGVECDVTQTPDDDTLTQATAASRMSHSTVFTSGTGTTMDITISQEDIAAFERGLSQ---KEQTLRNTWEGAKRRHRNEEDAMQKEIADLQAK-------RSAVESDRRRINESKLEAMRELQAVGNQMSSAISRVRQSDVDEAKKQAADLARTRDELNNGSRRDDIAKEIKVQEDKLKSIASRIEQDMKIRKVLNDQKNEQSEIDMLEKQVSDEFLGLK-DMLKDNSYVLSEHGEHNVTVTTEDPVSPVEVAANNIRRKHLDAEDDVNRANEAIADLNGKIAEKRAV--------LSQNNGRLQQL-------KNRANQLNAE------GGAVQKVNNVVSAILRSDLYDPDLITADSKPSEIMQF----LQDAISELSAI---DVKPEVVSRILKP----LKKKGKTDASCPCCLRDFVDMDETTRFMNQMNALVDPDTSELME-MISKKNKESTESLERFEKWRTAIAQNINECIEYTGVNNEIKDLEAFIA--AEGEGELKDLQDQD-------QSLKEKLSEKQKEASSLRTLLASLNTILDTARRIWTKEGQVKEKKEKLKYAFGYADLGNETRDLNTVEADLTKSNDAKEAAYTEINR-LNGEQKDINDKISRVTNQAA---AADRNAREKQDAFTRDQEASKRRDELNQLLGKLGDDDKELEKSLAPIRTHLLQKESDRDRMRTANGYEES-------KLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENADAIKDEEAKLVSMKPEIEQLKKQVDDSERQKQKIQNNIDVLKLQKEVNDMEEEIGKLEDDAKDMGGEDAA-RILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEERHRVKMIEYETTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITNIQITSDQDKAGRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMALDEPTTNLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQTGFNMPERYYQVSREEGHDGRFYSKINAIDW 1400
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|953494117|emb|CEG43711.1| (dna repair protein rad50 [Plasmopara halstedii]) HSP 1 Score: 562.377 bits (1448), Expect = 3.698e-173 Identity = 454/1446 (31.40%), Postives = 732/1446 (50.62%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLG-CQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNEL----------HRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSH-----EFRTKKGFCELLIDQSKEANTCMCC---TTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERM-------------KLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTG-MSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQA--ELVRAAETALEEKVKMMSRSQEL-----------EQEK------TRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRV-------DENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGE-DGG-GRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQT-GFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
M+ +EK+++RGIRSFSP+ E+ IEFY PLT+++G NG GKTT+IECLK ACTG LPPG + SGQS +HDPK+ EVKASI+LRF+ R GK M++ R+ Q++ K+ TFK L+GVI+ +N + +K SL HKC +L+ +P +S AILESV+FCHQEES+WPL++GA LKK+FD+IFESARYTKALEAI K +K R + K+ + DL L+ +R+TA DI ++ER ++Q++ K + I + L + ++ EVK + L +E VE + ++V + + G +++ +TDE LQ+ L + ++ + +RL+++ K E + E + + ++ + Q+L+AD + Y L + L+ SG FL F+ + + + ++ + + E+ EL +++ ++ ++ +++ + T I N L R A S L+ ++ + RA V+A K F + ++ + + ++ +++ ++ ++E T +V + +H K E +A + + + F + D NT+ A+++++++ I + + LV A Q L E T+ ++E ++ + + LE R + + + +L+ + NP + + + I+ A R D +R + KKG E + C C TP +A+ E + S T +K +K+++ E Q L T++KE IP K E+E + + A E + K + + L +E V+ R K E L + + T L K+ E + + D VEA + +A + N LQ Q E IN +L + EEK +M ++ +E EQEK +LKA + E+E +++ T E R ++ D ++ L + D Q +C Q QG +L E++A + AQ + ++D L ++ PQI++ + ++RQI DN+ YR + ELE + E L+ +V D N+ + AL+ ++ + MK + + ++ + +E++ +LR LK++E+++R+ I ETT +AV DL +Y+KALD +L+QYH K+EEIN IIR LW TY+G DI+ I +VSG+ DG +A RSY+YRV+MKK +DMRGRCSAGQ+VLA++VIRLALAETFC++CG++ LDEPTTNLD ENK GLA AI +++ RS+QQNFQL+ ITHDE+FV M+ + TQT S PE+YWRI RE G R S I+ EW
Sbjct: 1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPG--ARSGQSLVHDPKIAGTNEVKASIRLRFRNRAGKVMLIHRTFQVRQTKKA--ITFKALDGVIRVVNELGEKV-SLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARMDNAKDYKRDLDILSAHRKTAEDIRDKIERAQEKLQEVTEKGDEANHEIVKAKKTLEELQQLQDEVKKLHAQLERREEDVERKQQSV---RTAYGKIEKIMNDTDEELQSSLNDYDAIIDEHHKAFSRLQEQAERLKDEQEKVKQEYVALCASKARVETNIDTYQKLVADLIDSASKLSTKYRFHL-QPLSSQPEDVSG--------------------------FLDAFKNVVKDKHDAVNSLDVKQRQDDDKMTTELLELSSQVKHLRDDLATKKQKLADLKREKTVIANRLRELGGAGIHSQRDAEEMTSQLAKTEKTIAEYRAKNNVMALKDEIHGFNLRINDINRVMDDLGQQIN-------QLRLRARENTAIEVKRSEHRKKEEVFQATLFEKVADVEDIFEGGEKPKDRNTLLTAISDIDSR-ITERKRCLDAKKSELVSAEQHLMENATSSKLVEKELNLMRSTKNQLE-RQHMTRLKELLDKI----------NP-GHDLKSAELGIKEAERAYADAKDKVVRRKNMVMFLNIYKKKGLKE---------HCCPLCERDMTPAEAQAFESILSS-KTDDKKVANKIKEAEELEKSWLQTL-------TEIKEKIPSWRKWLELETTILDKVKELEVVYSAQKALEIDVKDKKAAFDLAQEQVEDARTAKFEMEILCKTANELYHTDIALRKEEERMGGSQGSSGRSLSD--------VEAEKDAKQAQVQDLNHQLQRKQKELDH-----INDTLQQLQNDLLSRKEEKFRMETQRKEYDEAVREQNRLREQEKALKDAYNQLKASEPELERKLRKKTSEREMRRTEARE---DLRAQRLELQERQGDFQVFSAKCKQVEQG------ELAKLERQA---HTLSDNIAQTKHRED--AAIQSLTDLTPQIKIAEEVLSKNEIVKRQIHDNLDYRELQKELETLRIEAEDLKHQVGNLPLLDDVNDRVASASAALNMAEHSFA---VMKGKRQQLMEDI----RERKVQLRVPTLKDVEEKYRHKLIQFETTQMAVADLDRYYKALDESLLQYHSKKVEEINTIIRSLWQITYKGQDIDTIELVSGQLDGAVSKAARSYDYRVMMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILSARSQQQNFQLVCITHDEEFVQMLSR---TQTIEGSRPEFYWRILRENIGGDRFVSKIERREW 1337
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|695370553|ref|XP_009514339.1| (hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae] >gi|348687250|gb|EGZ27064.1| hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae]) HSP 1 Score: 556.984 bits (1434), Expect = 5.549e-171 Identity = 472/1455 (32.44%), Postives = 742/1455 (51.00%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTK--EMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKE----TTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEK-FTEITNEL-----HRQAAVPASVLSSMQQEVERARADY----EVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHI--LEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREV-QAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCT------TPLDAKGVE-LLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDF------KRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETAL----EEKVKMMSRSQEL-----------EQEKT------RLKARQCEVEAEVKLATEEEIPLRQA-----------LKQYQADFETLKVRLDAEEADKQRKVIECMQRYQG-FDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYR---DAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGG--GRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQT-GFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
M+ +EK+++RGIRSFSP+ E+ +EFY PLT+++G NG GKTT+IECLK ACTG LPPG + SGQS +HDPK+ EVKAS++LRF+ R GK MVV RS Q+ + KN TFK L+GVI+ +N + +K SL HKC +L+ +P +S AILESV+FCHQEES+WPL++GA LKK+FD+IFESARYTKALEAI K +K R + K+ + DL LT N TA I ++E ++++ + + E++I + L++ ++ EV+ + L + +++V+E++ A K + + ++DE LQ L + ED +R L+ +E K+ E+Y A + + ++ + Q+++AD + Y L Q +++ D+ S AE F + + KQE ++ L+A + ++ LT + +E+T K L +E R E N E++ T EL H Q A +SS E E++ DY +V+A K + + + ++ + + ++ G+ +++ S + +E + + D+ K E +A ++ + D D +++ AV +++ LI + T+ L A + L E T+ + + E+D L ++ + +H+ L+AL E+ P + D R+ E ++E QA D + + +K L K+ CC TP + + E +L + G K DK++K E L R + T +K+ +P K E+E + + + A+ ++LE ++ K+ + ++E + L K +EL + +R++ G R L VEA + +A E NR +Q Q E + + E+++ + L EEK++M ++ +E +QEKT +LK + E+E EV+ T E R A L++ Q DF +DK C Q +G + L+ ++Q T+ E A Q+ L ++ PQ++ + ++R I+DN+ YR + ELEK + E+ L+ V AL+ D+V++ A+E + + L A +E + +LR LK++E+++R+ I ETT +AV DL +Y KALD +L+QYH K+EEIN IIR LW TY+G DI+ I +VSG + G +A RSY+YRVVMKK +DMRGRCSAGQ+VLA++VIRLALAETFC++CG++ LDEPTTNLD ENK GLA AI ++ RS+QQNFQL+ ITHDE+FV M+ + TQT + PEYYWRISRE G R S I+ EW
Sbjct: 30 MSSIEKLSIRGIRSFSPNREEIVEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPG--ARSGQSLVHDPKIAGTNEVKASVRLRFRNRAGKAMVVQRSFQV--RQTKKNLTFKALDGVIRVVNELGEKV-SLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLKEGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMRTAEGIREKIELAQEKLREATEEGQEAEEKIAQAEVTLKELQQLQEEVRKLHTQLQRRQEDVVVKEQSVRSAYGK----IENIMNDSDEELQGFLNDYDGIIEDHRRAFGALKAQEARLQVEQNKSKEDYVA----LRASKARVETNIATYQKMVADLIDLAAKLGTKYRFHL---------QPLSSQQDDI------SAFVAE--------FRNVVKDKQEEVN-SLDAKQRQEDDKLTTELSELTS-RVKQLRDELNSKTRSLETLNQEKRALTSRLRELGGAGVHSQR--EADEMSSQVTEAEKSLEDYKQKNDVMALKSEIQGYNRQINDINDVIDALGQQI-GQLRLYAS------KNSEIEFKRNDYLKKHEAFQATLSEKVADFEEILEGGDKPTDRDSLASAVGRIDS-LIVERKRSCDTKRMELAAAEKRLMENTTS-------SKLAEKELDSLRQKKNELERQHMTGLKALLEKVI------PGE-----DLRNAELGVKEAEQAYAD----AKDKVVRRKNMVMFLNIYKKKGIKDHCCPLCERDMTPEEEQAFEAILSDKTDDG--KVADKIKKAE-ELERSTLE------TLTGIKQQMPSWRKWLELETTIPQKVNELQEIYAAQKALENGVLDKKTALELIQEKFEDAKVAKTELDSLRKTADELHMSDMTITREERMKASQGMGG-RSLADVEAEKDAKQAELQELNRQVQRKQRE-------LDHTNEILQQLQNDLHNRREEKLRMETQRKEYDDAIKEQNRLRDQEKTLKDACSKLKKSEPELEHEVRSKTTERETHRAAAREQMRAQRTELQERQGDFRVF--------SDK------CKQVQRGELEKLEREVQTLSDNIAHTKQREDTAIQS------------LADLVPQMKSAEKNLSKNEIVKRHIQDNLDYRALQKELEKLRAEVEDLKATVG---NLPALDDVNDRVESASMALIAAKESRAVVSGKKQQLMAQIRENKVELRVPNLKDVEEKYRHKLIQFETTQMAVADLDRYFKALDESLLQYHSRKVEEINTIIRSLWQITYKGQDIDTIELVSGHEQGVTAKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSR---TQTMDGTRPEYYWRISREDIGGNRFVSKIERREW 1365
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|632967778|ref|XP_007900169.1| (PREDICTED: DNA repair protein RAD50 [Callorhinchus milii]) HSP 1 Score: 486.878 bits (1252), Expect = 2.068e-145 Identity = 427/1417 (30.13%), Postives = 725/1417 (51.16%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDD--EQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSL--GCQEMEGETDESLQA---RLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFD---DRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEAN--TCMCC--TTPLDAKGVELLEESLATGIRKWTDKVQKLEVSLPRHQQQ------LADLRACATDVKE--LIPLRAKLCEVE---ERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETN-RHLQETQAEQSKAAKRMI-NQAELVRAAETALEE----KVKM---MSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQ--DWEKKALGTQLVEL-----EAAQARLKQ---DLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENE--EKEALERALDKVQNQYRDAREMKI-RNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGED---GGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISR 1367
M+ +EKM+++G+RSF DD +Q I F +PLT++VG NG+GKTTIIECLKY CT PPG T G +++HDPK+ +T+V+A I+L+F+ +G+ + V +SL KGK FK LEG+I + K S L KC +++ + A +S A++ +V+FCHQE+S+WPL +G TLK+KFDDIF + RY KALE + + R+ +A+ ++ + +L L +N+E A +I +L K ++ + +++E++I+ L+ RL + +++L +V + V+ +A+ +KK + Q++E + ++ Q +L+ + H+ E TRL T ++ E Q++ Q+ ++ + G++Q L+ADR +E V DA L RTLAG L SG ER +R VE + + G Q L E K R + + R + T LE + +Q E+ ++ ++ R + L ++E+ERA AD V + +K L+++LR++ E+ E++ ++ RTE +V+++D +K E++ +R N + L H P+ ++ + T+A+ + +R++LT++ + A ++ + +AE+ E++ A ++ EK+ F+ +D E L ++Q +D + I Q E N C C P +A+ +++ + L + +R DK++ E L R +++ L +R T++ E L LR KL + +R+K E+ +A+ S E + ++CL ++ M EL D +RK Q + L+ V+ S + Q + +H ET + + + +++I +Q EL+++ +++L E K+++ M R Q+LE++ L + +++ A E+ PL AL++ LK +LD E +K C + + + ++ K++ DW K + + E E ++ L++ L VE Q E+I I+ + + R ++DN+T R+ + EL + + L +++ E + + + R LD+ Q +D R + R + + + ++E L+ + K+ E++FR + I TT LA DL Y+KALD+A+M++H MK++EINKIIR+LW TYRG DIE I I S D G R+YNYRVVM KG T LDMRGR SAGQ+VLAS++IRLALAETFC++CG++ LDEPTTNLD EN E LA A+ +I RS Q+NFQL+VITHDEDFV+++ + E+++R+ +
Sbjct: 1 MSKIEKMSIQGVRSFGIDDRHKQVITFSTPLTVLVGPNGAGKTTIIECLKYICTSDFPPG---TKGNTFVHDPKVAHETDVRAQIRLQFRDVNGETVAVQKSLLCTQKGKK--IEFKTLEGLITRLRHGEKIS--LSSKCAEIDREMISALGVSKAVINNVIFCHQEDSNWPLSEGKTLKQKFDDIFSATRYIKALETLRQVRQKQAQRVRECQGELKYLKQNKEKAHEIRDQLTNKETQLAASKENVQSIENQIDPLENRLLEIDQSLAKV-----------IKVDNEIKALESRKKQMEEDNQDLEMKMEQVFQGTDEQLIDTYQNHQRTVSEKTRLV---TDRQRELERVNQRCQKLNRQKSDMLVEQGRLQ-LLADRQQENVKRRDA----LVRTLAGQLD-LSGYERPPFSDRQYHGFRQQ----VEERLKIEQEAGNQ--LVNEFTEKDAAKQRQIDKVRDKKTGLERTIDLKLDIHRKKQLELNSVNVDLQQLEGSSDRLQELDQE-LKKAERELERAEADSNVEGLRAEVTALQKEKGELDRSLRKLDQEM-------ETLSFHTVTRTEMEVSKKDKANKEEQIRKIKSRHNDELV-ALLGH--FPNKKQLE---------------DWIHTKANEINSSREKLTKMTKDLASAEQNKNHTSAELKKKEQQLA-------------QYEEKL----------FEVCGGQDFESDLYKLQDDIDKTSKQRAMLSGATAVYTQFISQLTEDNEPCCPVCQRIFPSEAELQDIVND-LQSKLRLVPDKLKATESELKRREKRRDEMMGLKPVRETVTELNERDLPELRNKLQNIIRDIQRLKCDVEEQETLQAAFISEE----------GSAKQCLQDISLMDRYQMELR------DVERKIAQQAA------KLQGVDVSRTMQQVNQEKQEMQHKLETVSSRVELKRKLIQDQQELIQSLKSSLNEVRAEKLQIASNMQRRQQLEEQSVELATEIESLHRDIREAKEQLSPLAAALEKL------LKEKLDLME----KKTASCKEIQEKINDVKEKVKNIDWFAKEIQRYIQEKKDEFKEQKESELQETVTQLNEVEKQREKIQRDIEAFRKDIDTQKLEERWLQDNLTLRKRVEELRGVEAKRQDLLQQIGEMQVMQLKNERRQLDEKLEQLKDNRSLAHGRQKGFEEEILRFRKE----LKEQQYKDAEEKFREMMITIRTTELANRDLDIYYKALDQAIMKFHSMKMQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVTAGDKRRNYNYRVVMVKGDTPLDMRGRYSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSNQRNFQLVVITHDEDFVELLSRS-------QYVEHFYRVKK 1291
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1159662289|gb|OPJ87917.1| (DNA repair protein RAD50 [Patagioenas fasciata monilis]) HSP 1 Score: 469.159 bits (1206), Expect = 6.601e-139 Identity = 414/1418 (29.20%), Postives = 711/1418 (50.14%), Query Frame = 0
Query: 1 MAGLEKMALRGIRSFSPDDE--QTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSE--SLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVE---VKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQASGTERGDVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERA--RADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYR----FD---DRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMC--CTTPLDAKG-VELLEESLATGIRKWTDKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCEVE--------ERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQ-TETNRHLQET-----QAEQSKAAKRMINQAELVRAAETALEEKVKMMS---RSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDE-------NEEK------EALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRAT---RSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRIS 1366
M+ +EKM++ G+RSF +D+ Q I F+SPLT++VG NG+GKTTIIECLKY TG PPG T G S++HDPK+ ++T+V+A I+L+F+ +G+ + V RS+ KGK FK LEGVI TK E SL KC +++ + A +S ++L +V+FCHQEES+WPL +G LK+KFD+IF + RY KALE + + R ++ ++K + +L L +N+E A +I + L + A++ + +++E ++ L++ L E+ LV+ + ++AL ++ +E+ + +K K + +G TDE L+ R +++ QR + ++ + K+ + E QR ++ EL + G++ QL ADR++E + D+ L ++LA L + G ER + R HV A V+ +R D + L RE + K + + R + T LE + + +Q E+KN++ + ++ R + ++ + + E+E+A + E + + R ++ EK NL+KTLR++ E+ E + ++ T+ ++ ++D K E++ +R + + L + P+ N ++ + N K+ NQ RD + L KR A +E + + ++R+ E+ FD +D + L ++Q ++ + I Q E N C C + ++ + L + +R DK++ E L R +Q+ ++ + L PLR + E++ +++ AN + + E ++ +++ + CL +T M A++ D +RK V E L V+ S L+ +Q + +HL +T + Q + +L A EK+++ S R ++LE++ L + E+K A E+ PL L++ Q + E L + A + Q K+ ++ + + +++++ ++ + EA +K L E Q E+I+ +++ + + + R +EDN+T R+ +L++ ++ + L K + E NE+K E+L+R D + R E +R + +LR + ++ ++++R + I+ TT L +DL Y+KALD+A+M +H MK+EEINKIIR+LW TYRG DIE I I S D A+ RSYNYRVVM KG T LDMRGRCSAGQ+VLAS++IRLALAETFC++CG++ LDEPTTNLD EN E LA A+ +I RS+Q+NFQL+VITHDEDFV+++ + +T + + + ++ S
Sbjct: 1 MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG---TKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKK--TEFKTLEGVITR----TKHGEKSSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKENVKSIESQLEPLKSSLAAVEQNLVKAMRLDNDVKALESRRRQMEKDNEDLQQKMKKV----FQG-TDEQLRDR-------YQNHQRTVNEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRL-QLQADRHQEHITTRDS----LIQSLAAQL-ELDGFERVPLSER----HV-ANFHVLLKERQERDAEAANH-LMREFARKEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQEIVKT-EHELEKAERNSSVEKLELEVRTLQNEKI--NLDKTLRKLDQEM-------EQLNLHTATITQMEILKKDKADKEEQIRKIKSRHSDELT-SLLGY--FPNKNQLEDWLHSKNKKI---------------------------NQTRDN---------LGKLNKRLAS------VEYDKSHASSELRRKEEQLSLHEAQIFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKRKEQKRDEMMS-------LKPLRQTVVELQNTDIPGLRNKIQNANRDLVSLKGEIEEQESQLQTALSEEEGAKACLQDITLMERYQADIR------DCERK------VAQQEAKLLGVDLSRSVLQVSQEKQEKKHLWDTVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQLSSSVQRRRQLEEQTVELTTEVQSLCREIKEAQEQVFPLDATLEKLQQEKEDLMNKRTASNKEAQEKISVIKEKVKDINKYVKEIENYIQQRKDDYKKQKEAELEEVKSQLAASEKQKEKISKEMETIRQDIDTQKIQERWLEDNLTLRKRNEDLKEVEDNIKQLVKEMGEMKVPQMKNEQKRLEEKIESLKRNHDVALGRQRGFEEEIVRF--------------KKELRESQFRDADEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIYQCS 1297
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1210511674|dbj|GAX29488.1| (DNA repair protein RAD50 [Fistulifera solaris]) HSP 1 Score: 311.612 bits (797), Expect = 2.354e-83 Identity = 217/623 (34.83%), Postives = 336/623 (53.93%), Query Frame = 0
Query: 779 DKVQKLEVSLPRHQQQLADLRACATDVKELIPLRAKLCE-----VEERMKLANEQ---NAKWRASVRSL---EEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTY---RRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
D +L +L + + DL A D++EL + + C+ E+RM + +Q N + R L E ++ KK +K EE S+++ + T + K L +R++ + D +E+ +E+ K A R + ++L+R L E+ K+ ++L K+++ A++ E +EE L +AL ++AD LK Q ++I+ +E Q E+EA R+ ++ + + + + + +D+ ++Q+ N+T R +++LE+EK EL ++ E +L L+ + + +E+K R E R L + + KL S + K+I++R R I TT+LA EDL+KY+ A+D+AL+ +H +KI EINKIIRELW TY+G DI I IVSG++ G +A +SYNYRVVM KG++ +DMRGRCSAGQRVLASIVIRLALAETF I G + LDEPT NLD++NK+GLA A+A+++A RS+Q+NFQL++ITHDEDFV M+K ELS+ TGFSMPE Y+++ RE A G+ YS I A +W +
Sbjct: 841 DDCNRLRDTLKKQEGYKLDLEADDRDLRELFDMAKRWCDDGTKIAEKRMSIFQKQLDLNTSLPETGRDLKTVERDIAKKSEEK---EETASKISSLLKTQQAMMNKISSLSGLAQRMEQLARDKEEK--------------------------FSEERKNADRKVELSDLIR---NILGEERKL---QEQLAPLKSKVSAKESEQGKMRASGEQEEERLIEALGLFKADLAELK--------KTQEEIIK-----------------YELSNPEDQKQEIEAKMKRVADNISAKRKEANVVIGDLNKRKSSLQDQDRKKKQLVHNITIIESTRKVADLEREKREL---ERKTQGLESISSLFEKLNAAEARKAKEQELKFRTEGRWSELVEQIRTLKRKLASPEYKDIDERCRKTTIEHTTTLLAAEDLKKYYSAIDKALLMFHGLKIAEINKIIRELWMLTYKGEDITNIEIVSGQETGLKAGKSYNYRVVMTKGSSEMDMRGRCSAGQRVLASIVIRLALAETFGICVGSLALDEPTVNLDYKNKQGLAIALAQIVASRSQQRNFQLVLITHDEDFVSMMKTELSSMTGFSMPEKYFQVRREKAIDGKYYSKIDAVDWDDL 1400
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|673027550|ref|XP_008867736.1| (hypothetical protein H310_04952 [Aphanomyces invadans] >gi|574476509|gb|ETW03507.1| hypothetical protein H310_04952 [Aphanomyces invadans]) HSP 1 Score: 306.605 bits (784), Expect = 6.314e-82 Identity = 208/556 (37.41%), Postives = 310/556 (55.76%), Query Frame = 0
Query: 857 LSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEA-VEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKV----IECMQRYQGFDALQCKLQDWEK--KALGTQLVELEAAQARLKQDLQG-----------VEGQLEEIAPQIQVV---ANRSEGK----DQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGED-GGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGT 1386
L+QV + + K E+++F ++L T ERDL + + SL S T TE L+ Q + ++ N+ + + A E +++ ++ ++K L R E+E A ++ LR L++ Q D T + + + Q KV I MQ Q D + +L ++ + + T+ E+E Q KQ+ +G + Q E I+ +I V+ NR+ + +RQI DN+ +R++ ++K KE++A+ +++VD+ + E A A+E + + + D L + +E QA+L LKNI+++ R+ I ETT++AV DL KY+KALD +LM++H KIEEIN IIR LW TYRG DI+ I IVSG D G ++ RSYNYRVVM+K + +LDMRGRCSAGQ+VLA +VIRLALAETFC++CG++ LDEPTTNLD NK GLA AI+ ++ R +QQNFQLI ITHDE+FV M+ + S G S PEY+W +SRE S I W +
Sbjct: 798 LAQVVEGCAMLKSVRKNHEQVEFDSRKLATL-----ERDLISRLADSLGSNPPTMTEAQGVLEAMQVNCRELETKLKNKQKEIHMAS---EAHMRLQGEVNKVREDKHILNQRNNELEK----AKDQRDLLRATLRKLQDDLATSQRDFPGVQRELQIKVNERDISRMQLKQAMDVKRSELTQCQQDMQLVKTKHEEVEQLQ---KQNDEGKLQELEQELQLLNAQSERISREIAVLQPEKNRARSSLSETESFKRQIRDNIQFRQLRDNVDKAKEDIAVFKRKVDKFKSTAEAENACRVANQTLSAAKEARAKLAGKQDNLQELVREVQAQLAHRDLKNIDEKKRHKFIEYETTVMAVSDLDKYYKALDLSLMEFHSRKIEEINAIIRSLWQITYRGQDIDTIEIVSGHDTGDSKSKRSYNYRVVMRKDSAVLDMRGRCSAGQKVLAGLVIRLALAETFCLNCGILALDEPTTNLDTANKLGLAQAISDILIAREKQQNFQLICITHDEEFVQMLNR--SQMLGGSRPEYFWTVSREEIAPRYFVSKIDKRPWSS 1336
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|1210514762|dbj|GAX26241.1| (DNA repair protein RAD50 [Fistulifera solaris]) HSP 1 Score: 304.679 bits (779), Expect = 3.237e-81 Identity = 143/245 (58.37%), Postives = 186/245 (75.92%), Query Frame = 0
Query: 1140 REMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEW 1384
+E+K R E R L + + KL S + K+I++R R I TT+LA EDL+KY+ A+D+AL+ +H +KI EINKIIRELW TY+G DI I IVSG++ G +A +SYNYRVVM KG++ +DMRGRCSAGQRVLASIVIRLALAETF I G + LDEPT NLD++NK+GLA A+A+++A RS+Q+NFQL++ITHDEDFV M+K ELS+ TGFSMPE Y+++ RE A G+ YS I A +W
Sbjct: 1130 QELKFRTEGRWSELVEQIRTLKRKLASPEYKDIDERCRKTTIEHTTTLLAAEDLKKYYSAIDKALLMFHGLKIAEINKIIRELWMLTYKGEDITNIEIVSGQETGLKAGKSYNYRVVMTKGSSEMDMRGRCSAGQRVLASIVIRLALAETFGIHVGSLALDEPTVNLDYKNKQGLAVALAQIVASRSQQRNFQLVLITHDEDFVSMMKTELSSLTGFSMPEKYFQVRREKAIDGKYYSKIDAVDW 1374
BLAST of EWM28490.1 vs. NCBI_GenBank
Match: gi|698810388|ref|XP_009838223.1| (hypothetical protein H257_12631 [Aphanomyces astaci] >gi|574107026|gb|ETV72541.1| hypothetical protein H257_12631 [Aphanomyces astaci]) HSP 1 Score: 297.36 bits (760), Expect = 8.427e-79 Identity = 213/574 (37.11%), Postives = 306/574 (53.31%), Query Frame = 0
Query: 837 RSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEA-VEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIEC-MQRYQGFDALQCKLQDWEKKALGTQLVEL-------------EAAQARLKQDLQGVEGQLEEIAPQIQVV--------ANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSG-EDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGT 1386
R+LE ++ + + E LSQV L K ++++F K+ V ERDL + + SL S T + L+ Q + ++ + V AA AL +++ + +EK +L R ++E A ++ LR L++ Q + T + + + + + Q KV E + R Q DA+ K + QLV+ EA L Q+LQ + Q E I+ I ++ ++ SE + +RQI DN+ +R++ +K KE+L ++++D E A A+E + + + D L +E Q +L LKNI+++ R+ I ETTM+AV DL KY+KALD +LMQ+H KIEEIN IIR LW TYRG DI+ I IVSG E G + RSYNYRVVM+K + +LDMRGRCSAGQ+VLA +VIRLALAETFC++CG++ LDEPTTNLD NK GLA AI+ ++ R +QQNFQLI ITHDE+FV M+ + S G S PEY W +SRE S I W +
Sbjct: 780 RALELDLTQTRLVVQQNEAKLSQVVEGWDLLKALKKSYDQVEFDAKK-----VAASERDLASRLADSLGSNPPTMSMAQEALESMQTKCRDLETKLKQKQAEVHAASDAL---MRLQGEVHRVREEKHQLNQRNIQLEK----AKDQRESLRAKLRKLQEELATAQRDVPSVQRELQIKVNEREISRLQLKDAIDAKRAELTSCQQDLQLVQRKHEEVDEMQKQNDEAKLHALDQELQQLHAQSERISRDIAMLQPEKTRARSSLSET-ESFKRQIRDNIQFRQLRDAADKAKEDLEAFKRKMDTFRSVAEAENACRVASETLNAAKEERAKLAGKQDNLQENVREVQVQLAHRDLKNIDEKKRHKFIEFETTMMAVSDLDKYYKALDMSLMQFHSQKIEEINAIIRSLWQITYRGQDIDTIEIVSGHESGDSNSKRSYNYRVVMRKDSAVLDMRGRCSAGQKVLAGLVIRLALAETFCLNCGILALDEPTTNLDSANKLGLAQAISDILIAREKQQNFQLICITHDEEFVQMLNR--SQMLGGSRPEYLWTVSREEIAPRYFVSKIDKRPWSS 1338 The following BLAST results are available for this feature:
BLAST of EWM28490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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