EWM28486.1, cds2169 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|585110902|gb|EWM28486.1| (phosphoglycerate bisphosphoglycerate mutase family protein [Nannochloropsis gaditana]) HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query: 1 MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGDRSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGALRLRLALPTSLAEATALVQVGGYTLPVTDSETMFAANECGEEDRPMRHYRPVHPNDWEPEEHLPTRMGLNPRETSAPAVGPTI 327
MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGDRSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGALRLRLALPTSLAEATALVQVGGYTLPVTDSETMFAANECGEEDRPMRHYRPVHPNDWEPEEHLPTRMGLNPRETSAPAVGPTI
Sbjct: 1 MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGDRSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGALRLRLALPTSLAEATALVQVGGYTLPVTDSETMFAANECGEEDRPMRHYRPVHPNDWEPEEHLPTRMGLNPRETSAPAVGPTI 327
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|553188657|ref|XP_005854836.1| (phosphoglycerate bisphosphoglycerate mutase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294224|gb|EKU21524.1| phosphoglycerate bisphosphoglycerate mutase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 436.802 bits (1122), Expect = 5.060e-153 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
Query: 1 MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGDRSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERV 210
MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGD SAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERV
Sbjct: 6 MRALAVRGLLLFVNICRSAAFSSVSSQKRSKMSGVAAAGVKISRDGDSSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERV 215
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|299115497|emb|CBN75661.1| (plastid phosphoglycerate mutase protein precursor [Ectocarpus siliculosus]) HSP 1 Score: 153.68 bits (387), Expect = 1.543e-40 Identity = 86/212 (40.57%), Postives = 128/212 (60.38%), Query Frame = 0
Query: 45 DGDRSAFSYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALA--ARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPT--FVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILT----QSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGALRLR 248
DG+ +F L RHG+T NA GR QG D S LT +G SQALE G+ LA A + +SP+ RA+ T + + +E R+ ++ K T VP+I+EI L++WQG L++D+ PE++ +W+ +P+ F +P R+LW RA +W+QI + Q QP R L+VAH+ INQA+ +TALG T +R+L++PNC L L+
Sbjct: 78 DGELESF-----FLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRK---SEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQP--RTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQ 279
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|551646391|ref|XP_005825982.1| (hypothetical protein GUITHDRAFT_76658 [Guillardia theta CCMP2712] >gi|428170074|gb|EKX39002.1| hypothetical protein GUITHDRAFT_76658 [Guillardia theta CCMP2712]) HSP 1 Score: 139.813 bits (351), Expect = 1.519e-36 Identity = 75/190 (39.47%), Postives = 114/190 (60.00%), Query Frame = 0
Query: 57 ILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLR-QDLQAQFPEEFHNWMNE-PAIFRVGD-HFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCG 243
+ RHG+T +NAEGR QG D SRLT +GE+QA +GR L+ D +F+SPL RAR T +L G + + +++E+ L++W+G L+ Q+++ +P+ + W E P F++ +P+R+LW RA + WE + + G+ LIVAH+GINQA+ T LG E +R+L FPNCG
Sbjct: 18 LFLRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRILS--DIPIDSVFVSPLTRARMTLELAAA-----GSGRNLSDSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLRRDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCG 200
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|104640802|gb|ABF73003.1| (plastid phosphoglycerate mutase protein precursor, partial [Karenia brevis]) HSP 1 Score: 142.124 bits (357), Expect = 5.199e-36 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 0
Query: 57 ILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQR-FDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFV--PEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGER-----VLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGAL 245
++ RHGET NA+G QG D+SRLT KG++QA + G LA +++F+SPL RA T +L+ + P P + PE++EI LY W+G ++DL+ + P+ + W + F V H+P+ ELW RA+ +W I S+ G+R LIV H+GI QA+ F+A+G + +R+L+FPN GAL
Sbjct: 100 LILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPIEQVFVSPLTRATSTLELVAQS--------LPCSLPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAI-RASEDGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGAL 287
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|255080054|ref|XP_002503607.1| (predicted protein [Micromonas commoda] >gi|226518874|gb|ACO64865.1| predicted protein [Micromonas commoda]) HSP 1 Score: 140.584 bits (353), Expect = 6.991e-35 Identity = 80/188 (42.55%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 56 VILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCG 243
V L RHG++ N EGR QG D+S LT KGESQA E+ R + K FD F SPLARA T +++ W D + E++EI LY +QG L+++ +A++ +++ W +PA F + HFPVRELW R W+ IL G+ VL+VAH+ +NQ+M ALG G +RRL+ NCG
Sbjct: 60 VTLVRHGQSTWNKEGRIQGSSDLSVLTQKGESQA-EITREMLQGKH-FDIGFRSPLARASRTAEVI--------W-DSRDSKLIDLWELREIDLYSFQGLLKEEGKAKYGDKYAAWKADPANFEIDGHFPVRELWERGAECWKSIL--DADGQDVLVVAHNAVNQSMVANALGLGSEYFRRLSQSNCG 234
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|1032277332|gb|OAO91660.1| (hypothetical protein AXX17_AT5G22050 [Arabidopsis thaliana]) HSP 1 Score: 135.961 bits (341), Expect = 1.544e-34 Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 56 VILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGA 244
V+L RHG++ N EGR QG D S LT KGESQA E+ R + FD F SPL R++ T +++ W + F +++EI LY +QG L+++ + +F E F W +PA F + H+PVRELW RAR W IL + + VL+VAH+ +NQA+ TA+G G +R L NCG
Sbjct: 50 VVLVRHGQSTWNEEGRIQGSSDFSVLTKKGESQA-EISRQMLI-DDSFDVCFTSPLKRSKKTAEII--------WGSR-ESEMIFDYDLREIDLYSFQGLLKKEGKEKFGEAFKQWQEDPANFIIDGHYPVRELWSRARSCWPGIL--AHESKSVLVVAHNAVNQALLATAIGLGTEYFRSLLQSNCGV 225
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|568834588|ref|XP_006471407.1| (PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Citrus sinensis]) HSP 1 Score: 141.354 bits (355), Expect = 1.952e-34 Identity = 78/188 (41.49%), Postives = 110/188 (58.51%), Query Frame = 0
Query: 56 VILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCG 243
V+L RHG++ NAEGR QG D S LT KGE+QA E R + + FD F SPL R++ T +++ + TDY +++EI LY +QG L+ + +A+F +H W PA F + H+PVRELW RAR W +IL + + VL+VAH+ +NQA+ TA+G G +R L NCG
Sbjct: 77 VVLVRHGQSTWNAEGRIQGSSDFSVLTKKGEAQA-ETSRQMLF-DESFDVCFSSPLIRSKRTAEIIWGNRKEEILTDY---------DLREIDLYSFQGLLKHEGKAKFGPAYHQWQVNPANFSIDGHYPVRELWARARNCWTKIL--AHESKSVLVVAHNAVNQALVATAIGLGTGFFRILLQSNCG 251
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|641826257|gb|KDO45488.1| (hypothetical protein CISIN_1g010288mg [Citrus sinensis] >gi|641826258|gb|KDO45489.1| hypothetical protein CISIN_1g010288mg [Citrus sinensis]) HSP 1 Score: 138.272 bits (347), Expect = 2.074e-34 Identity = 76/188 (40.43%), Postives = 108/188 (57.45%), Query Frame = 0
Query: 56 VILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCG 243
V+L RHG++ NAEGR QG D S LT KGE+QA E R + + FD F SPL R++ T +++ + TDY +++EI LY +QG L+ + + +F + W PA F + H+PVRELW RAR W +IL + + VL+VAH+ +NQA+ TA+G G +R L NCG
Sbjct: 71 VVLVRHGQSTWNAEGRIQGSSDFSVLTKKGEAQA-ETSRQMLF-DESFDVCFSSPLIRSKRTAEIIWGNRKEEILTDY---------DLREIDLYSFQGLLKHEGKTKFGPAYRQWQVNPANFSIDGHYPVRELWARARNCWTKIL--AHESKSVLVVAHNAVNQALVATAIGLGTGFFRILLQSNCG 245
BLAST of EWM28486.1 vs. NCBI_GenBank
Match: gi|1032277330|gb|OAO91658.1| (hypothetical protein AXX17_AT5G22050 [Arabidopsis thaliana]) HSP 1 Score: 135.576 bits (340), Expect = 2.394e-34 Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 56 VILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGA 244
V+L RHG++ N EGR QG D S LT KGESQA E+ R + FD F SPL R++ T +++ W + F +++EI LY +QG L+++ + +F E F W +PA F + H+PVRELW RAR W IL + + VL+VAH+ +NQA+ TA+G G +R L NCG
Sbjct: 50 VVLVRHGQSTWNEEGRIQGSSDFSVLTKKGESQA-EISRQMLI-DDSFDVCFTSPLKRSKKTAEII--------WGSR-ESEMIFDYDLREIDLYSFQGLLKKEGKEKFGEAFKQWQEDPANFIIDGHYPVRELWSRARSCWPGIL--AHESKSVLVVAHNAVNQALLATAIGLGTEYFRSLLQSNCGV 225 The following BLAST results are available for this feature:
BLAST of EWM28486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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