EWM28518.1, cds2156 (CDS) Nannochloropsis gaditana

Overview
NameEWM28518.1
Unique Namecds2156
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1049576..1049759 +
Alignment locationCM002458.1:1049909..1050015 +
Alignment locationCM002458.1:1050418..1051782 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28518.1
Productglycerophosphoryl diester phosphodiesterase
Orig transcript idgnl|cribi|Naga_100131g11.7463.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1049576..1049759 +
CM002458.1supercontigCM002458.1:1049909..1050015 +
CM002458.1supercontigCM002458.1:1050418..1051782 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008889glycerophosphodiester phosphodiesterase activity
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
GO:0006071glycerol metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR004129GlyceroP-diester-Pdiesterase
IPR030395GP_PDE_dom
IPR017946PLC-like_Pdiesterase_TIM-brl
Homology
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|585110935|gb|EWM28518.1| (glycerophosphoryl diester phosphodiesterase [Nannochloropsis gaditana])

HSP 1 Score: 1123.61 bits (2905), Expect = 0.000e+0
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query:    1 MRNFSFLYLLCVLAPIVDHEASWCRGVKATSVDTSSGFAHVRPASLVLPSTQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLPEIAAYASGIGPAKSVFTSMDPAVARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLSDDSEAGLEDVSPEIAQAASAAARSSTLSTAPLPSRRGRSSRSNRSSSSSHAKTGREAPAFSVTNGKTSAPKDVMAEIDTMWSSALSALRSLAGSVVGGKDGSSWVEGGVCGGERDADTSSCQPGACSVDGVADAVYRLPYLAVPWLRRKAA 551
            MRNFSFLYLLCVLAPIVDHEASWCRGVKATSVDTSSGFAHVRPASLVLPSTQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLPEIAAYASGIGPAKSVFTSMDPAVARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLSDDSEAGLEDVSPEIAQAASAAARSSTLSTAPLPSRRGRSSRSNRSSSSSHAKTGREAPAFSVTNGKTSAPKDVMAEIDTMWSSALSALRSLAGSVVGGKDGSSWVEGGVCGGERDADTSSCQPGACSVDGVADAVYRLPYLAVPWLRRKAA
Sbjct:    1 MRNFSFLYLLCVLAPIVDHEASWCRGVKATSVDTSSGFAHVRPASLVLPSTQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLPEIAAYASGIGPAKSVFTSMDPAVARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLSDDSEAGLEDVSPEIAQAASAAARSSTLSTAPLPSRRGRSSRSNRSSSSSHAKTGREAPAFSVTNGKTSAPKDVMAEIDTMWSSALSALRSLAGSVVGGKDGSSWVEGGVCGGERDADTSSCQPGACSVDGVADAVYRLPYLAVPWLRRKAA 551          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1072779346|ref|WP_069969209.1| (glycerophosphodiester phosphodiesterase [Desertifilum sp. IPPAS B-1220] >gi|1070568887|gb|OEJ73067.1| glycerophosphodiester phosphodiesterase [Desertifilum sp. IPPAS B-1220])

HSP 1 Score: 247.669 bits (631), Expect = 3.783e-74
Identity = 146/349 (41.83%), Postives = 207/349 (59.31%), Query Frame = 0
Query:   54 PHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLP----EIAAYASGIGPAKSVFT--SMDPAV--ARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMV 394
            P +IAHRGA GY PEHTL++Y LAI+LG ++IEPDLV+++DGHLI RH+ +++ETTDV+ R EFA R+ +     +              +V G+FS DFTLAE+KTLRAK+RL  R+ TYNG FQ+PT  E++ + +     TGR++GIY E K P +F   G  +E  +VE+L  K+ G  S        PD  +PL +Q F+   L++L  R+  VPLVQLL     + +  V Q      G + T+ D+T P    +IA YA  IGP+K +    + D  +     ++ EAH + L VH WTFR EA ++   +Q   + E + FF+ L VD +F +FPD A  V
Sbjct:    4 PIIIAHRGASGYRPEHTLESYTLAIELGADFIEPDLVISRDGHLIARHENNITETTDVAERAEFATRKTSKIIEGK--------------TVTGWFSEDFTLAELKTLRAKERLPFRNQTYNGQFQIPTFREILQLAQHKTQETGREIGIYPETKHPSYFQSIGLPLEEPLVEIL--KEFGYTS--------PD--SPLFIQSFEIANLKKL-NRLIDVPLVQLLGEENQQPYDFVLQ------GDKRTYQDLTTPAALSQIATYADAIGPSKRLIIPQAQDSQLLPPTPLIQEAHRVGLKVHAWTFRNEACFLAPEYQNQPEREYQQFFQ-LGVDGVFSDFPDVAFKV 318          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|504995620|ref|WP_015182722.1| (glycerophosphoryl diester phosphodiesterase [Microcoleus sp. PCC 7113] >gi|428252614|gb|AFZ18573.1| glycerophosphoryl diester phosphodiesterase [Microcoleus sp. PCC 7113])

HSP 1 Score: 239.58 bits (610), Expect = 7.994e-71
Identity = 136/355 (38.31%), Postives = 199/355 (56.06%), Query Frame = 0
Query:   54 PHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLPE----IAAYASGIGPAKSVFTSMDPAV----ARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLS 400
            P VI HRGACGY PEHTL +Y LAI +G +YIEPD+V TKDG L+ RH+ D+SETT+VS   EFA R+       +  +              G+F+ DFTLAE+KTLR K+RL  R+  ++G  ++PTL+E++D+V+++   TGR +GIY E K P +F      +E  +V +L+      +              P+ +Q F+   L++L Q + H+PLVQLL     + +  + +G S       T+ D+T PE    IA YA  IGP K +    +         +++D+AH + L VHPWTFR E  Y+   +  +S+ E   FF+ L +D LF +FPD A  V  ++LS
Sbjct:    9 PIVIGHRGACGYCPEHTLASYELAIQMGADYIEPDIVSTKDGVLVARHENDISETTNVSDAREFANRKTTKIIDGQEVI--------------GWFTEDFTLAELKTLRTKERLPFRNRAFDGDLEIPTLQEIIDLVKKSSTETGRAIGIYPETKHPTYFKSINLSLEEPLVALLEANGYTSQHD------------PIFIQSFEVENLKQLNQ-MTHLPLVQLLAHGEQQPYDLMVKGDSR------TYADLTTPEELAKIAQYADAIGPDKRLVVPTNQKKRLQPPTSLIDDAHAVGLKVHPWTFRNEQQYLAPDYNGNSEAEYEQFFK-LGIDGLFSDFPDTAVSVRNRILS 329          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|495549183|ref|WP_008273762.1| (glycerophosphoryl diester phosphodiesterase [Cyanothece sp. CCY0110] >gi|126622385|gb|EAZ93091.1| Glycerophosphoryl diester phosphodiesterase [Cyanothece sp. CCY0110])

HSP 1 Score: 236.113 bits (601), Expect = 1.650e-69
Identity = 138/359 (38.44%), Postives = 210/359 (58.50%), Query Frame = 0
Query:   51 TQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHL---GREATFGDMTLP----EIAAYASGIGPAKSVFTSMDPAVA-----RAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEK 397
            +Q+P +IAHRGA GY PEHTL+AY+LAI++G  +IEPDLV TKDG LI RH+V++++TT++S RPEF  R     + +++     +T         G+F+ DFTLAEIKTLRA Q L  R  +++GLF++PT +E++D+V++ E  TG+KVGIY E K P +    G  +E  +V++L+      R               L +Q F+   L++L   I  VPLVQLL +   +   ++ +   +     G   T+G++  P    +IA YA+ IGP K +  S+D          +++D+AH++ L VHP+TFR E  Y+ T +  D   E + FF +L VD +F +FPD A   + +
Sbjct:    5 SQKPIIIAHRGASGYRPEHTLEAYQLAIEMGANFIEPDLVSTKDGVLIARHEVNITDTTNISDRPEFFSR-----YTTKIIDGKKET---------GWFADDFTLAEIKTLRAVQSLKFRDQSFDGLFEIPTFQEIIDLVQQVETDTGKKVGIYPETKHPTYHDSVGLSLEEPLVKLLKDNQFCDRDR-------------LFIQSFEVSNLQKLRSLI-DVPLVQLLNAGSIERDGTLIETQPYDFVVNGDSRTYGELRTPTGLADIAIYANAIGPWKRMIVSVDETNKILLPPTSLIDDAHDVGLLVHPFTFRNENAYLATNYNGDPQLEYQQFF-NLGVDGVFSDFPDIAVKTLNQ 334          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1210102497|dbj|BAY21627.1| (glycerophosphoryl diester phosphodiesterase [Calothrix sp. NIES-2100])

HSP 1 Score: 234.958 bits (598), Expect = 4.205e-69
Identity = 139/352 (39.49%), Postives = 199/352 (56.53%), Query Frame = 0
Query:   54 PHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQ---RSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMT----LPEIAAYASGIGPAKSVFTSMDPA----VARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMV 394
            P +I HRGA GY PEHTL AY LAIDLG +YIEPDLV+TKDG LI RH+ ++SETTD++  PEFA R+       E              S  G+F+ DFTL+E+KTLRAK+R+ Q   +++ Y+GLF +PTL+E++++ +    A GR +GIY E K P +F   G  +E  ++  LQ    G + +           AP+ +Q F+   L+ LA +   +PLVQ LL+   K +  +   V      + ++ D+T    L EIA YA  IG  K++   +D         ++V +AH   L VH WTFR E  ++   FQ +  +E   FF SL VD +F +FPD A++V
Sbjct:   10 PIIIGHRGASGYRPEHTLAAYELAIDLGADYIEPDLVITKDGVLIARHENEISETTDIAQHPEFAQRQTTKIIDGE--------------SKTGWFTEDFTLSELKTLRAKERIPQVRSQNTNYDGLFTIPTLQEIINLAQTKSIAVGRTIGIYPETKHPTYFQSIGLPLEDTLLATLQAN--GYQGA----------NAPIFIQSFEVSNLKYLATKT-DLPLVQ-LLNNTGKPYDFIVNNV------DCSYADLTTKSGLQEIAEYAQAIGVHKNMIVPIDSNKKLHFPTSLVTDAHAASLLVHAWTFRNEDFFLPLDFQGNPQKEYELFF-SLGVDGVFSDFPDTANLV 326          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1121279802|ref|WP_073592909.1| (glycerophosphodiester phosphodiesterase [Phormidium ambiguum] >gi|1115275704|gb|OKH39047.1| glycerophosphodiester phosphodiesterase [Phormidium ambiguum IAM M-71])

HSP 1 Score: 231.106 bits (588), Expect = 1.400e-67
Identity = 136/357 (38.10%), Postives = 200/357 (56.02%), Query Frame = 0
Query:   54 PHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHL-GREATFGDMTLPE----IAAYASGIGPAKSVFTSMDPA----VARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLSD 401
            P VIAHRGA G+ PEHTL AY LAI+LG +YIEPDLVLTKDG LI RH+ ++S TT+V+  PEFA R        +              S+ G+F+ DFTLAEIKTL+AK+RL  R  ++NG+F +PT +E++D+V+      GR +GIY E K P +F   G  +E  ++  L   D G +S+            P+ +Q F+   L++L+Q +  +PL+QLL         + GQ     + G   T+ D+T P+    IA YA+GIGP K +   +D         +++ +AH + L +HP+TFR E  Y+   +  + + E   FF  L VD +F +F + A  VI ++  +
Sbjct:    8 PIVIAHRGASGFRPEHTLAAYELAINLGADYIEPDLVLTKDGILIARHENEISTTTNVAEYPEFANRLTTKLIDGK--------------SITGWFTEDFTLAEIKTLKAKERLPFRDQSFNGMFSIPTFQEIIDLVKAKSREIGRSIGIYPETKHPTYFASLGLPLEEPLIATLH--DNGYKSA----------TDPIFIQSFETGNLQKLSQ-LTDLPLIQLL--------ENSGQPFDLAIKGDRRTYQDLTKPQELAKIAEYAAGIGPNKQMIIPIDNQGKLLTPTSLIADAHAVGLLIHPYTFRNETQYLSPDYHNNPELEYEQFFH-LGVDGIFTDFTNTALTVINRIYKE 328          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1059553194|emb|SCL63953.1| (glycerophosphoryl diester phosphodiesterase [Micromonospora citrea])

HSP 1 Score: 231.491 bits (589), Expect = 3.180e-67
Identity = 147/367 (40.05%), Postives = 198/367 (53.95%), Query Frame = 0
Query:   50 STQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQ---RSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLPE----IAAYASGIGPAKSVFTSMDPA----VARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRF-------FFESLNVDALFVEFPDQASMVIEKM 398
            +T RP VI HRGA GY PEHTL+AYRLAI  G +YIEPDLV+T+DG L+ RH+ ++S TTDV+ RPEFAGRR   T                 V+V G+F+ DFTLAE+KTLRAK+RL Q    ++ ++G F+VPTL+EVVD+ R    A GR +G+Y E K P +F   G  +E  +VEVL+   L  R+S            P+++Q F+   LR+L  R+  V L QLL +       +V        G   T+ DM  P     IA+YA G+G  K++    D A        +V +AH   L VH WTFR E  ++    +  SD   R         F  L +D +F + PD A    E +
Sbjct:   39 ATDRPLVIGHRGASGYRPEHTLEAYRLAIRQGADYIEPDLVVTRDGALVARHENEISGTTDVAARPEFAGRRATKTIDG--------------VAVTGWFTEDFTLAELKTLRAKERLPQVRVANTAFDGRFEVPTLQEVVDLARAEGRARGRTIGVYPETKHPTYFASIGLPLEEPLVEVLRRNKLTHRNS------------PVIIQSFETANLRKL-DRMIDVRLAQLLDAAGRPYDFTVA-------GDARTYRDMAAPAGLRWIASYADGVGANKNLIVPRDAAGRLLAPTTLVRDAHRERLIVHAWTFRAENQFLPADLRIGSDPNARGDIQSEYELFLGLGLDGVFTDHPDTAVAAREGL 371          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1149171933|ref|WP_077729839.1| (glycerophosphodiester phosphodiesterase [Methylocaldum sp. 14B])

HSP 1 Score: 231.106 bits (588), Expect = 4.753e-67
Identity = 147/360 (40.83%), Postives = 195/360 (54.17%), Query Frame = 0
Query:   54 PHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHL---GREATFGDMTLP----EIAAYASGIGPAKSVFTSM-DP--------------AVARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQA 391
            P VIAHRGA GYLPEHTL AY LAI+ G ++IEPDLV TKDG LI RH++++SETTDV+  PEFA RR +       A              EG+F+ DFTLAEIKTLRA+QRL  R   +N  F++PT +EVV++ + A   +GR +GIY E K P +    G  +E K+VE+L+   L  R+            AP+V+Q F+   L+ L +++  V LVQL+             G  +     G   T+ D+  P    EI  YA GIGP K     + DP                  AVV +AH + L VH WTFR E+ Y+ + +  D  +E   F+ SL VD +F EFPD A
Sbjct:   18 PVVIAHRGASGYLPEHTLAAYELAIEQGADFIEPDLVSTKDGMLIVRHELNISETTDVAEHPEFAARRTSKIIDGRQA--------------EGWFADDFTLAEIKTLRARQRLPFRPQQFNDRFEIPTFQEVVELAKRASERSGRVIGIYPETKHPTYHRSVGLPLEEKLVEMLKRHGLNGRA------------APVVIQSFETDNLKAL-RKMTEVRLVQLIDGDGVAPGGGPIPGKPYDFTAGGDPRTYADLLTPEGLMEIKTYADGIGPWKRYLIGLADPGEVGASENDYGEKLGYPTAVVRDAHSVGLFVHAWTFRDESRYLASDYGGDPLKEYHQFY-SLGVDGVFSEFPDTA 349          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|1129390635|ref|WP_075353501.1| (glycerophosphodiester phosphodiesterase [Desulfovibrio sp. DV] >gi|1127983752|gb|OLN29883.1| Glycerophosphoryl diester phosphodiesterase [Desulfovibrio sp. DV])

HSP 1 Score: 230.335 bits (586), Expect = 5.855e-67
Identity = 149/371 (40.16%), Postives = 197/371 (53.10%), Query Frame = 0
Query:   38 FAHVRPASLVLPSTQRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQRSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMTLP----EIAAYASGIGPAKSVFTSMDP----AVARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQASMVIEKMLS 400
             A  RPA+        P VI HRGACG+ PEHTL +Y LAIDLG ++IEPDLV TKDG L+ RH+ D+S TTDV+ +           FP   A +  D        +EGFF+ DFTLAEIKTLRAK+RL  R  +Y+G F +PT EE++ +V+  E  TGR VGIY E K P +F   G  +E ++VE+L         S            P+ +Q F+   L+ L Q +  V LV L   P  + +  +   VS   G + TF D+  P    EIA +A GIGP K +    +P         VV +AH   L VHP+TFR +  Y+   +  D  +E   FF+ L VD +F +FPD A    E  LS
Sbjct:   26 LAQARPAA--------PLVIGHRGACGHRPEHTLASYELAIDLGADFIEPDLVATKDGALVARHENDISGTTDVAAK-----------FPERKAKKTIDG-----TEIEGFFTEDFTLAEIKTLRAKERLDFRDHSYDGQFAIPTFEEIIALVKRKETETGRIVGIYPETKHPTYFRGIGLPLEGRLVEILNANGYDKADS------------PVFIQSFEIQNLKDLRQ-MTKVRLVFLYDEPDMRPYDFI---VS---GDKRTFADLLAPEALAEIAGFAQGIGPWKRLIIKENPDKSLNAPNTVVADAHAAGLTVHPYTFRNDPRYLAPDYAGDPIQEYVQFFK-LGVDGVFSDFPDTAVAAREVFLS 352          
BLAST of EWM28518.1 vs. NCBI_GenBank
Match: gi|503090380|ref|WP_013325220.1| (PEP-CTERM sorting domain-containing protein [Cyanothece sp. PCC 7822] >gi|306985301|gb|ADN17182.1| glycerophosphoryl diester phosphodiesterase [Cyanothece sp. PCC 7822])

HSP 1 Score: 231.106 bits (588), Expect = 6.326e-67
Identity = 138/365 (37.81%), Postives = 202/365 (55.34%), Query Frame = 0
Query:   41 VRPASLVLPST---QRPHVIAHRGACGYLPEHTLQAYRLAIDLGVEYIEPDLVLTKDGHLICRHDVDLSETTDVSLRPEFAGRRRNITFPSEVAVRDPDTGAAPLVSVEGFFSFDFTLAEIKTLRAKQRLTQ---RSSTYNGLFQVPTLEEVVDMVREAEGATGRKVGIYAELKEPYFFHLNGFDIESKVVEVLQTKDLGVRSSLPHLVPGPDVPAPLVLQCFDPYTLRRLAQRIPHVPLVQLLLSPLSKEHSSVGQGVSHHLGREATFGDMT----LPEIAAYASGIGPAKSVFTSMDPA----VARAVVDEAHELDLAVHPWTFRREAMYVDTPFQADSDEELRFFFESLNVDALFVEFPDQA 391
            V P   +L  T   + P VI HRGA GY PEHTL++YRLAI+LG +YIEPDLV TKDG L+ RH+ ++S TTDV+  PEFA R+       +              ++ G+F+ DFTLAE+KTLRAK+R+     +++ YNGLF++PTL+EV+D+ ++     GR +GIY E K P +F   G  +E  +V +L+      ++S            P+ +Q F+   L+ L   I  VPL+QL+ S  +K +  V  G +       T+GD+     L +IA YA GIG  K +    D          +VD+AH   L VH WTFRRE  ++    Q   +EE + ++++  +D +F + PD A
Sbjct:   17 VMPTQKILAGTLTGELPIVIGHRGASGYRPEHTLESYRLAIELGADYIEPDLVSTKDGVLVARHENEISGTTDVANHPEFADRKTTKIIDGQ--------------TLTGWFTEDFTLAELKTLRAKERIPNIRPQNTVYNGLFEIPTLQEVIDLAKQKSAELGRTIGIYPETKHPSYFDSIGLSLEEPLVNILKANGYNSQTS------------PVFIQSFEVSNLQELNTLI-DVPLIQLIDSAENKPYDFVLSGDAR------TYGDLITATGLADIANYADGIGAYKWLIIPRDAQGNLLSPTTLVDDAHAAGLLVHSWTFRRENNFLPANLQNQPEEEFKRYYQT-GLDGMFSDNPDIA 347          
The following BLAST results are available for this feature:
BLAST of EWM28518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110935|gb|EWM28518.1|0.000e+0100.00glycerophosphoryl diester phosphodiesterase [Nanno... [more]
gi|1072779346|ref|WP_069969209.1|3.783e-7441.83glycerophosphodiester phosphodiesterase [Desertifi... [more]
gi|504995620|ref|WP_015182722.1|7.994e-7138.31glycerophosphoryl diester phosphodiesterase [Micro... [more]
gi|495549183|ref|WP_008273762.1|1.650e-6938.44glycerophosphoryl diester phosphodiesterase [Cyano... [more]
gi|1210102497|dbj|BAY21627.1|4.205e-6939.49glycerophosphoryl diester phosphodiesterase [Calot... [more]
gi|1121279802|ref|WP_073592909.1|1.400e-6738.10glycerophosphodiester phosphodiesterase [Phormidiu... [more]
gi|1059553194|emb|SCL63953.1|3.180e-6740.05glycerophosphoryl diester phosphodiesterase [Micro... [more]
gi|1149171933|ref|WP_077729839.1|4.753e-6740.83glycerophosphodiester phosphodiesterase [Methyloca... [more]
gi|1129390635|ref|WP_075353501.1|5.855e-6740.16glycerophosphodiester phosphodiesterase [Desulfovi... [more]
gi|503090380|ref|WP_013325220.1|6.326e-6737.81PEP-CTERM sorting domain-containing protein [Cyano... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2164rna2164Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications