EWM28533.1, cds2148 (CDS) Nannochloropsis gaditana

Overview
NameEWM28533.1
Unique Namecds2148
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1020197..1020297 -
Alignment locationCM002458.1:1019835..1019995 -
Alignment locationCM002458.1:1019421..1019680 -
Alignment locationCM002458.1:1019192..1019284 -
Alignment locationCM002458.1:1018951..1019091 -
Alignment locationCM002458.1:1018787..1018849 -
Alignment locationCM002458.1:1018593..1018699 -
Alignment locationCM002458.1:1018306..1018465 -
Alignment locationCM002458.1:1018054..1018157 -
Alignment locationCM002458.1:1017792..1017879 -
Alignment locationCM002458.1:1017635..1017700 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28533.1
Productbeta-tubulin
Orig transcript idgnl|cribi|Naga_100009g3.576.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1020197..1020297 -
CM002458.1supercontigCM002458.1:1019835..1019995 -
CM002458.1supercontigCM002458.1:1019421..1019680 -
CM002458.1supercontigCM002458.1:1019192..1019284 -
CM002458.1supercontigCM002458.1:1018951..1019091 -
CM002458.1supercontigCM002458.1:1018787..1018849 -
CM002458.1supercontigCM002458.1:1018593..1018699 -
CM002458.1supercontigCM002458.1:1018306..1018465 -
CM002458.1supercontigCM002458.1:1018054..1018157 -
CM002458.1supercontigCM002458.1:1017792..1017879 -
CM002458.1supercontigCM002458.1:1017635..1017700 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005198structural molecule activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005200structural constituent of cytoskeleton
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
GO:0051258protein polymerization
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
GO:0005856cytoskeleton
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR008280Tub_FtsZ_C
IPR013838Beta-tubulin_BS
IPR017975Tubulin_CS
IPR023123Tubulin_C
IPR003008Tubulin_FtsZ_GTPase
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR000217Tubulin
IPR002453Beta_tubulin
Homology
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|553179673|ref|XP_005852742.1| (tubulin beta [Nannochloropsis gaditana CCMP526] >gi|422295792|gb|EKU23091.1| tubulin beta [Nannochloropsis gaditana CCMP526] >gi|585110951|gb|EWM28533.1| beta-tubulin [Nannochloropsis gaditana])

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEVEEMMA 447
            MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEVEEMMA
Sbjct:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEVEEMMA 447
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|676384347|ref|XP_009035452.1| (tubulin beta chain [Aureococcus anophagefferens] >gi|676386943|ref|XP_009036750.1| tubulin beta chain [Aureococcus anophagefferens] >gi|676391591|ref|XP_009039073.1| tubulin beta chain [Aureococcus anophagefferens] >gi|323450235|gb|EGB06117.1| tubulin beta chain [Aureococcus anophagefferens] >gi|323452892|gb|EGB08765.1| tubulin beta chain [Aureococcus anophagefferens] >gi|323453505|gb|EGB09376.1| tubulin beta chain [Aureococcus anophagefferens])

HSP 1 Score: 859.751 bits (2220), Expect = 0.000e+0
Identity = 409/430 (95.12%), Postives = 426/430 (99.07%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVH+Q GQCGNQIGAKFWEVI+DEHGVDPTG YHGDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVEN+DQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTC+C+FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGLKMSTTFIGNSTA+QE WKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|298707748|emb|CBJ26065.1| (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0
Identity = 413/430 (96.05%), Postives = 425/430 (98.84%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVHVQAGQCGNQIG+KFWEVI+DEHG+DPTGAYHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGAYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|267078|sp|P30156.1|TBB5_ECTVR (RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin >gi|167993|gb|AAA33284.1| beta-tubulin [Ectocarpus variabilis] >gi|298708739|emb|CBJ30701.1| beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 857.825 bits (2215), Expect = 0.000e+0
Identity = 412/430 (95.81%), Postives = 425/430 (98.84%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVHVQAGQCGNQIG+KFWEVI+DEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTF+GN+TA+QEVWKRV++QFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|299471584|emb|CBN79446.1| (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0
Identity = 411/430 (95.58%), Postives = 424/430 (98.60%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVHVQAGQCGNQIG+KFWEVI+DEHG+DPTG YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICD+PPKGLKMSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGVYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDVPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|267080|sp|P30157.1|TBB6_ECTVR (RecName: Full=Tubulin beta-6 chain; AltName: Full=Beta-6-tubulin >gi|167995|gb|AAA33285.1| beta-tubulin [Ectocarpus variabilis])

HSP 1 Score: 855.129 bits (2208), Expect = 0.000e+0
Identity = 411/430 (95.58%), Postives = 423/430 (98.37%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVHVQAGQCGNQIG+KFWEVI+DEHG+DPTG YHGDSDLQLERIN YFNEAT GRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGRYHGDSDLQLERINCYFNEATAGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|298707747|emb|CBJ26064.1| (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0
Identity = 410/426 (96.24%), Postives = 422/426 (99.06%), Query Frame = 0 
Query:    5 VHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            VHVQAGQCGNQIG+KFWEVI+DEHG+DPTGAYHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF+LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:   32 VHVQAGQCGNQIGSKFWEVISDEHGIDPTGAYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQMTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFMLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 457
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|676386909|ref|XP_009036733.1| (hypothetical protein AURANDRAFT_71566 [Aureococcus anophagefferens] >gi|323452875|gb|EGB08748.1| hypothetical protein AURANDRAFT_71566 [Aureococcus anophagefferens])

HSP 1 Score: 850.507 bits (2196), Expect = 0.000e+0
Identity = 403/424 (95.05%), Postives = 420/424 (99.06%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
            MREIVH+Q GQCGNQIGAKFWEVI+DEHGVDPTG YHGDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVEN+DQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTC+C+FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGLKMSTTFIGNSTA+QE WKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|224007038|ref|XP_002292479.1| (tubulin beta [Thalassiosira pseudonana CCMP1335] >gi|220972121|gb|EED90454.1| tubulin beta [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 403/430 (93.72%), Postives = 422/430 (98.14%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVH+Q GQCGNQIGAKFWEV++DEHGVDPTG YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDC+QGFQLTHS+GGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+G+APLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTCA +FRGRMS+KEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKG+KM+TTF+GN+TAVQE WKRV++QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVMSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCMQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGIKMATTFVGNTTAVQETWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
[Close]
BLAST of EWM28533.1 vs. NCBI_GenBank
Match: gi|14285787|sp|Q9LKI8.1|TBB_THAWE (RecName: Full=Tubulin beta chain; AltName: Full=Beta-tubulin >gi|8926601|gb|AAF81906.1|AF276908_1 beta-tubulin [Thalassiosira weissflogii])

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 404/430 (93.95%), Postives = 422/430 (98.14%), Query Frame = 0 
Query:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
            MREIVH+Q GQCGNQIGAKFWEV++DEHGVDPTG YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDC+QGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+G+APLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTCA +FRGRMS+KEVDEQMLNVVNK+SSYFVEWIPNNVKASICDIPPKGLKM+TTF+GN+TAVQE WKRV++QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVMSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCMQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQMLNVVNKSSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNTTAVQETWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
The following BLAST results are available for this feature:
BLAST of EWM28533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553179673|ref|XP_005852742.1|0.000e+0100.00tubulin beta [Nannochloropsis gaditana CCMP526] >g... [more]
gi|676384347|ref|XP_009035452.1|0.000e+095.12tubulin beta chain [Aureococcus anophagefferens] >... [more]
gi|298707748|emb|CBJ26065.1|0.000e+096.05beta tubulin [Ectocarpus siliculosus][more]
gi|267078|sp|P30156.1|TBB5_ECTVR0.000e+095.81RecName: Full=Tubulin beta-5 chain; AltName: Full=... [more]
gi|299471584|emb|CBN79446.1|0.000e+095.58beta tubulin [Ectocarpus siliculosus][more]
gi|267080|sp|P30157.1|TBB6_ECTVR0.000e+095.58RecName: Full=Tubulin beta-6 chain; AltName: Full=... [more]
gi|298707747|emb|CBJ26064.1|0.000e+096.24beta tubulin [Ectocarpus siliculosus][more]
gi|676386909|ref|XP_009036733.1|0.000e+095.05hypothetical protein AURANDRAFT_71566 [Aureococcus... [more]
gi|224007038|ref|XP_002292479.1|0.000e+093.72tubulin beta [Thalassiosira pseudonana CCMP1335] >... [more]
gi|14285787|sp|Q9LKI8.1|TBB_THAWE0.000e+093.95RecName: Full=Tubulin beta chain; AltName: Full=Be... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2156rna2156Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications