EWM28585.1, cds2130 (CDS) Nannochloropsis gaditana

Overview
NameEWM28585.1
Unique Namecds2130
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:963272..964577 -
Alignment locationCM002458.1:962911..963083 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28585.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g23.628.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:963272..964577 -
CM002458.1supercontigCM002458.1:962911..963083 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28585.1 vs. NCBI_GenBank
Match: gi|585111003|gb|EWM28585.1| (hypothetical protein Naga_100009g23 [Nannochloropsis gaditana])

HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0 
Query:    1 MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE 492
            MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE
Sbjct:    1 MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE 492
[Close]
BLAST of EWM28585.1 vs. NCBI_GenBank
Match: gi|585111002|gb|EWM28584.1| (hypothetical protein Naga_100009g23 [Nannochloropsis gaditana])

HSP 1 Score: 1016.14 bits (2626), Expect = 0.000e+0
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0 
Query:    1 MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE 492
            MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE
Sbjct:   82 MLESKGYTPEEIYAVQGVVAVLVNAGVLTVHAEKLEAADLSELTTATSTTGTPKRRLQSNVGCCPCSPDRHTNPPNLVHTKDEEIKHVAFNLTDDGASPPAHPMNAAPTPDRTDPRACERTLLGCEKKSVQLAADRRSMYKSMKAMGQALRRTAAARSYYLFVKDEVHSFEDFEALSKSEQEATRQELATQLLLTCKEYGLQGVELQEYARALGMEVPDLTKTSDAELENLGREMAAQHLLENVAKSMGKDLGKEGLVRFRDTFGDAALRRIGVEPSPEVYTAFGDFATEASRFITLSRQAMEAQGILEPGATEAYKNATAIADRLASTFEGVNVTDVLVTATGLMMDAEPYLTNSIDNPVDDATRQKMKEPWQIILKLSQFEKAAQQQRKSFTMSLKEDNVLDGILLLHEASGTSVESPLMQQLDFGRIAEITEDHMLDASELRFLVQRVGALNEIYDVDDFAELMAEVEDNYRMVHGLPPVREERPSLSE 573
The following BLAST results are available for this feature:
BLAST of EWM28585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585111003|gb|EWM28585.1|0.000e+0100.00hypothetical protein Naga_100009g23 [Nannochlorops... [more]
gi|585111002|gb|EWM28584.1|0.000e+0100.00hypothetical protein Naga_100009g23 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2138rna2138Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications