EWM30518.1, cds213 (CDS) Nannochloropsis gaditana

Overview
NameEWM30518.1
Unique Namecds213
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:541919..542091 +
Alignment locationCM002455.1:542204..542346 +
Alignment locationCM002455.1:542428..542767 +
Alignment locationCM002455.1:542961..544077 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30518.1
Productcysteinyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100013g2.9806.mrna
GeneCYSRS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:541919..542091 +
CM002455.1supercontigCM002455.1:542204..542346 +
CM002455.1supercontigCM002455.1:542428..542767 +
CM002455.1supercontigCM002455.1:542961..544077 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006423cysteinyl-tRNA aminoacylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004817cysteine-tRNA ligase activity
Vocabulary: INTERPRO
TermDefinition
IPR009080tRNAsynth_1a_anticodon-bd
IPR014729Rossmann-like_a/b/a_fold
IPR015803Cys-tRNA-ligase
IPR015273Cys-tRNA-synt_Ia_DALR
IPR024909Cys-tRNA/MSH_ligase
Homology
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|585113182|gb|EWM30518.1| (cysteinyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1215.29 bits (3143), Expect = 0.000e+0
Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0
Query:    1 MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE 590
            MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE
Sbjct:    1 MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE 590          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|298710863|emb|CBJ26372.1| (Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 307/513 (59.84%), Postives = 375/513 (73.10%), Query Frame = 0
Query:   90 FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEG--GEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK---------------GDSP--RLRPS-GARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKG 582
              L+NT  R KE F+     +V FYSCGPT+YD AHIGNFRAFLTYDVLKRWLLY G++V+HVCNLTDVDDKII RMARDG+SL ELT K+A++FF+DL++LN++PAS YPRATEHI DIV MVQ L+D+  AY+  GS YFRVS+   YG+LA LD SGME GA +GGG++DA E+ ++K DAKDFALWK YK EDG VFW+T LGKGRPGWHIECSAMAR+FLG T+D+HAGG+DLVFPHHENE+AQSEG +G+ FCRCWVHN FVNV+ EKMSKSKGNFLTL+ +L T LDVRAFRYLVV+SQYR  L F+ + L  A+ T+ RLDK++ AL   A  G   E G   E+  E+  V+ K++ GF+AGM DDLNTPRAAA+LF +VKA E ALK               G SP   L P   A+ +LA L++MD+V GIFYEP   E    GG   G     + AD+P E  EL+ RR  A+E ++WA AD  RD +++  G  +KD KG
Sbjct:   19 LMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAAGNEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAAASLFAVVKAGENALKRVRSANADGGDTAAAGGSPPQSLLPQVDAKYLLAALDRMDSVFGIFYEPAGYEAANTGGDSGGDG---KEADLPGEMAELLARRLAARENKDWATADAVRDEIKA-LGYSVKDVKG 527          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|551632937|ref|XP_005819331.1| (hypothetical protein GUITHDRAFT_82387 [Guillardia theta CCMP2712] >gi|428163271|gb|EKX32351.1| hypothetical protein GUITHDRAFT_82387 [Guillardia theta CCMP2712])

HSP 1 Score: 511.146 bits (1315), Expect = 1.031e-174
Identity = 253/410 (61.71%), Postives = 300/410 (73.17%), Query Frame = 0
Query:   90 FQLYNTASRKKEPFK-TGQPGK-VSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGV----------IDKAVA-GFEAGMADDLNTPRAAAALFTLVKATEKALKGD 486
            F++YNT SR KE F+   + GK V  Y+CGPTIYDFAHIGNFRAFLTYDVLKRWLLY GYDV+H+CNLTDVDDKII+RM RD + L ELT+KFA  FF+DL+ LN++PA  YPRATEHI DIV M+  LV +G AYE  GS+YF VS FP YG LA+LDF  M  GA++GGGI+D + +  +K  +KDFALWKAYK EDG V WET L KGRPGWHIECSAM+RR+LG + D+HAGGVDL FPHHENEIAQSE   G ++CR WVHNGFVN+ NEKMSKS GNFLTLR + +   D RAFRYLVV+SQYR  LNF  + L GAR T+ RLDK +       RE + A EGG  ++               ++K+ A   + GM DDLNTPRA AALFT +K+TEK L  D
Sbjct:   22 FKIYNTLSRDKETFEPMCEDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVEMINGLVQKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMMDGASEGGGITDREGF--EKKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKRR-------REKEEAAEGGRWEDNRMEEEAEERAESLQVEKSAARSLDGGMMDDLNTPRACAALFTFIKSTEKLLNTD 422          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|397646936|gb|EJK77487.1| (hypothetical protein THAOC_00680, partial [Thalassiosira oceanica])

HSP 1 Score: 510.76 bits (1314), Expect = 6.120e-171
Identity = 287/595 (48.24%), Postives = 377/595 (63.36%), Query Frame = 0
Query:   17 PRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYGS-LAKLDFSGMEMGA-AKGGGIS------DADEYVADKGDAKDFALWKAYKAE--------DGPVFWETA----LGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEE--GGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK-----GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGG 583
            PRR    ++  +  ++A +     F P S R SS +  R +R+    +  + +S  + G+ A +     N     LYN+ SR K PF+   P  VS Y+CGPT+YD+AH+GNFRAFLTYDVLKR L Y GY+V+H+CNLTDVDDKIIKR  R+ +SL +LT K++++FF+DL+ALN++ A  YPRAT++I ++  ++  L   G +Y+S+ GS+YF V +   YG+ L +LD   M+ GA A+ GG        DADEY ADK   +DF LWKAYK E        D  V  E      +GKGRPGWH+ECSAMARR+LGPT+DLHAGGVDL FPHHENEIAQSEGA+   FC CWVHNGFVN+ NEKMSKSKGNFLTLR +  +  DVRA+RYLVV+SQYR PL+F  E L+ A+  + RLD+VK+ +     E   A E  GGE   EM  ++   +A FEA +ADDL+ PRA+A+LF++VKA EK  K      D   L   G R  L  + +MD V GIFY+ P + G++    EE      +   VP    +LVM+R  AKE ++W LAD  R  +R   G  +KD KGG
Sbjct:    7 PRRKSQQTMRALF-VIASISCSSAFAP-STRYSSYK--RAKRKLGRPSALNSASDQSKGTVAAAAPRTLN-----LYNSLSRTKLPFEPASPPYVSMYTCGPTVYDYAHVGNFRAFLTYDVLKRALTYLGYNVDHICNLTDVDDKIIKRCDRENVSLMDLTTKYSQLFFDDLEALNIIKAREYPRATDNIDEMAKLIIDLERNGLSYQSEEGSWYFSVDKKDGYGTNLVQLDVGQMKKGASAETGGAGAQRGNLDADEYDADKEGVRDFCLWKAYKPEFDRDDATWDPVVTLEDGATKNIGKGRPGWHLECSAMARRYLGPTIDLHAGGVDLKFPHHENEIAQSEGANCAPFCNCWVHNGFVNIGNEKMSKSKGNFLTLRTACPSADDVRAYRYLVVSSQYRNPLSFTDEALSAAKGALKRLDRVKSNIV----EALDANEVTGGE--SEMTTLVGSQLANFEAAIADDLSMPRASASLFSIVKAAEKEFKRFAKSDDDGALDLGGLRCALDAINKMDQVFGIFYDVPAVNGDEASSSEE------DDLSVPGNVLDLVMQRTAAKEAKDWELADSLRTKIR-ELGFAVKDVKGG 579          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|546313435|ref|XP_005715284.1| (Cysteinyl-tRNA Synthetase [Chondrus crispus] >gi|507111754|emb|CDF35465.1| Cysteinyl-tRNA Synthetase [Chondrus crispus])

HSP 1 Score: 495.738 bits (1275), Expect = 1.186e-167
Identity = 262/499 (52.51%), Postives = 329/499 (65.93%), Query Frame = 0
Query:   92 LYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDF--SGMEMGAAKG--GGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVE 586
            LYNT SR KE F T +PG V FYSCGPT+YD+AHIGNFRAFLTYDV+KRWLL  GYD++HV NLTD+DDKII+++   G SL ELT+K+A  FF DL  LNV+PA  YPRATEHI++I   V  LV RGYAYE  GS YF V++F SYG LA+L+    G    AA+   G   D+D+Y  DK D +DFALWK+YK  D  +FW++ LGKGRPGWHIEC+ MA ++LGP +D+H GG+DLVFPHHENE+AQSE  +G  F R WVHNGFVN+ NEKMSKS GNF TLR   +   D RAFRYLVV+SQYR  L F  + L  AR T+ RLD ++  L     E  G  +GGE  E++  VI KA   F  GM DD NTPRAAAA+F++V A EK LK      + +G+   L  L+ MD V GIFY  P++ G       E        A+ P    +L+  R  A++ +++A ADE RD + +    I+   +G  +E
Sbjct:   22 LYNTLSRTKEAFTTVEPGVVRFYSCGPTVYDYAHIGNFRAFLTYDVIKRWLLCRGYDIKHVMNLTDIDDKIIRKVRELGCSLDELTNKYADAFFADLDLLNVIPAQQYPRATEHIKEIEETVGGLVKRGYAYERDGSTYFSVAKFESYGRLAQLEKREKGSRTAAAEATEGENIDSDDY--DKADMRDFALWKSYKTNDAGIFWDSPLGKGRPGWHIECTCMAIKYLGPELDIHGGGIDLVFPHHENELAQSEALTGRPFSRFWVHNGFVNINNEKMSKSLGNFQTLRDIAKKPDDARAFRYLVVSSQYRSALAFTDQSLKSARSTVKRLDALRKRL-----ESAGG-DGGE--EDIAEVIAKAKENFARGMDDDFNTPRAAAAMFSVVNAAEKMLKAKKMNEKAAGS--CLKCLDDMDRVFGIFYN-PVIPGTTSASASEPP------AEAPLHLVKLLDERKTARKAKDFARADEIRDQVSAEGFAIVDTPQGPKLE 501          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|873240621|emb|CEL93242.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 477.248 bits (1227), Expect = 3.386e-159
Identity = 260/561 (46.35%), Postives = 345/561 (61.50%), Query Frame = 0
Query:   76 STARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGK----------VSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-------------GSFYFRVSRFPSYGSLAKLDF-SGMEMGAAK--GGGISDADEYVADKGDA--------KDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAAL-TRVAREGKGAEE--GGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVV-------VELADV----PKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIV 588
            ST    +  + D  F+L++T  R K  F  G P            V FYSCGPT+YD AHIGNFRAFLTYD+LKR+L+Y GY V HVCNLTDVDDKII+RM  +G+S  ELT+ + ++FF+D++ALNVLPA+HYPRA+++I  + +M+Q L+D G AY +Q              S YF VS+   YG L    F SG+  G  +  G    +++E  +D  DA        +DFALWKAYK EDG V+W +  G+GRPGWHIECSAMA+  LG T+D+HAGG+DL+FPHHENEIAQSEGASG+ FCR WVHNGFVN+  EKMSKSK NFLTLR    T  DVRAFR+LVV S YR PLNF+   L  AR ++ RLD  +  L    A+E    ++   G+ + ++     + V  FEA + DDLNTPRA AA+F L+   E+AL+     L   G + V + L++MD+V G++Y+P    G  E G  EG           V+L ++    P E   LV  RA+AK  +++  AD+ R  + +  G  +KD   G +E+ 
Sbjct:   27 STVSGSSIGSADRRFRLFDTGERTKRSFDAGMPSSSAAPLDSERVVRFYSCGPTVYDAAHIGNFRAFLTYDLLKRFLIYLGYTVVHVCNLTDVDDKIIQRMRDEGVSRTELTNTYTQLFFQDIKALNVLPATHYPRASDYIPQMQAMIQTLIDNGLAYTAQEQPRQQGAIELPAASVYFNVSKCERYGVLTDRRFLSGIRAGGGERDGSASEESEEVASDHADAAGTGKVEAEDFALWKAYKEEDGDVWWNSPWGRGRPGWHIECSAMAKALLGDTIDIHAGGIDLIFPHHENEIAQSEGASGQPFCRYWVHNGFVNINQEKMSKSKRNFLTLRQCCPTKDDVRAFRFLVVGSNYRRPLNFSAAALQSARNSVRRLDAFRRRLKAAAAQEAPHLQDLPSGDWNAQLINASSECVNDFEAHLLDDLNTPRAFAAMFKLIATCERALQECQGALLGEGLKGVSSALDRMDSVFGLWYDPVEWGGAPEDGTSEGETSETIRLDPRVDLPEMLEGFPAEILLLVEERAKAKSVKDYQAADKLRTEIET-LGFSVKDLSNGMIELA 586          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|223996950|ref|XP_002288148.1| (probable cysteinyl-trna synthetase, partial [Thalassiosira pseudonana CCMP1335] >gi|220975256|gb|EED93584.1| probable cysteinyl-trna synthetase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 461.455 bits (1186), Expect = 1.015e-154
Identity = 253/512 (49.41%), Postives = 323/512 (63.09%), Query Frame = 0
Query:   90 FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYGS-LAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAE--DGPVFWET-----ALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK---------GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGG 583
              LYN+ +R K PF   +   VS Y+CGPT+YD AH+GNFRAFLTYDVLKR LLY GYDV+HVCNLTDVDDKIIKR  R+G+SL ELT KF   FFEDL+ALN++ A  YPRATEHI ++  ++  L   G AY+S+ GS+YF VS+   YG+ L +LD   +++GA+   G  DADEY  +K   +DF LWKAYK E       W+       +G+GRPGWH+ECSAMAR++LG T+DLHAGGVDL FPHHENEIAQSEGA+   FC CW+HNGFVN+ +EKMSKSKGNFLTLRG+  T  DVRA+RYLVV+SQYR PL+F    L  A+  + RLDKVK  L   A E      G    E++          FE  +ADDL+ PRA+A LF++VKA EK  K          ++P L   G + V   L+ MD V                             ++P++  +LV++R+ AK+ ++W LAD  R  + +  G  +KD KGG
Sbjct:    1 LTLYNSLTRSKTPFTPLRSPSVSMYTCGPTVYDSAHVGNFRAFLTYDVLKRVLLYLGYDVDHVCNLTDVDDKIIKRCEREGVSLIELTRKFEGKFFEDLEALNIIKAREYPRATEHIDEMAKLILDLERNGLAYQSEEGSWYFSVSKKEGYGTRLVQLDPEQLKIGASAQRGSLDADEYDTEKEGVRDFCLWKAYKPEFDREDATWDPDGVTRNIGRGRPGWHLECSAMARKYLGDTIDLHAGGVDLKFPHHENEIAQSEGANCAPFCNCWIHNGFVNIGDEKMSKSKGNFLTLRGACPTADDVRAYRYLVVSSQYRNPLSFTDAALGAAKGALKRLDKVKTLLDE-ALESSNDNSGDASAEKL--------TNFEVAIADDLSMPRASACLFSIVKAAEKEFKRVDKAKDEDDNAPPLDLVGLQRVRDALDLMDNVF----------------------------EIPQDVMDLVVQRSAAKDAKDWDLADSLRTRI-TELGFAVKDVKGG 474          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|544210308|ref|XP_005535555.1| (cysteine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D] >gi|449015867|dbj|BAM79269.1| cysteine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 458.759 bits (1179), Expect = 2.209e-152
Identity = 252/537 (46.93%), Postives = 342/537 (63.69%), Query Frame = 0
Query:   63 RTVFSMSSISASGSTARSRNFL---TNDIPFQ------LYNTASRKKEPFKTGQP-GKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVR 589
            R V    ++   GS++RS   L    ND+ +        YNT SR+KEPF+T    G V FYSCGPT+YD+AHIGNFRAFLTYD++KRWL++ GY V HV N+TDVDDKII+R  R+     ++T +FA  FF+DL+ALN++PA  YP AT HI D+  +V+ L+ RG+AY+   S Y+ V RF  YG+LA+++F  +    +  G   DA  + A K D +DF LWK +K +DG V W+T +G GRPGWH EC+AMA ++LG +VD+HAGG DLVFPHHENEIAQ E  +G  F R W+HNGFVN+  EKMSKS GN++TLR  +   LD RAFRY V+TS YRMPLNF  + L  A  T+ RLD  + ++  + R  + +  G + D+ ++   +  +  F   MADDLNT RAAA +F  ++  E AL+ D+ RLRP+ A L+L  L +MD V G+FYEP L         E   P       +P E  EL   RA+A+ +R++A+AD+ R+ LR  +G  ++D   G  EI R
Sbjct:   35 RRVCKQVTMQRRGSSSRSHGRLRCAENDLAWYARARTVFYNTLSRRKEPFETSSADGVVRFYSCGPTVYDYAHIGNFRAFLTYDLVKRWLMFCGYKVRHVMNITDVDDKIIQRSQREQRRAEDITRQFAAEFFQDLKALNIIPADAYPCATAHIDDMADLVRELLSRGFAYKLGDSVYYSVERFARYGTLARINFESL---LSSNGEEEDAGPHTALKRDPRDFVLWKGHKPDDGDVKWDTPIGCGRPGWHTECAAMAMKYLGSSVDIHAGGSDLVFPHHENEIAQCEAVTGTMFARFWIHNGFVNINGEKMSKSLGNYITLRDLVRDPLDARAFRYAVITSLYRMPLNFTDDTLGAAATTLRRLDLFRKSIIDLER-SEASTPGQKADQGLRASCEAYLRDFCDHMADDLNTARAAAVIFEALRHFE-ALRRDA-RLRPADASLILGMLREMDRVFGVFYEPELAHLS-----ETSEPSST---GIPPEVLELARLRADARARRDFAMADKLREQLRL-YGFAVRDTAQGP-EITR 555          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|219114520|ref|XP_002176430.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402676|gb|EEC42666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 451.825 bits (1161), Expect = 1.272e-149
Identity = 249/508 (49.02%), Postives = 314/508 (61.81%), Query Frame = 0
Query:   90 FQLYNTASRKKEPFKT--GQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLS-LPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYES-QGSFYFRVSRFPSYGS-LAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKA--EDGPVFWETA-LGKGRPGWHIECSAMARRFLGP-TVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK------GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKG 582
              L+N+ +R KEPF+        VS Y+CGPT+YDFAH+GNFRAFLTYDVLKR L Y GY V HVCNLTDVDDKII+R     +  +  LT ++ + F +DLQALN+ PA  YPRATEHI D++ +++ L D+  AYE+  GS+YFR    P YG+ L +L++  M   A    G SD  E+ AD      F LWKA+K   +     WE+  +  GRPGWH+ECSAMAR F G  T+DLH GG+DL FPHHENEIAQSEGA+G  FC CW HNGFVN++NEKMSKS GNFLTLRG+  T  DVRA+RYL V+SQYR  L F  + +  AR  I R+DK+K  L    R    +      D E+  V   A+  FE  + DDL+ PRA+AALF+LVKA E  LK       D   L  +G R +L  ++QMD V GIFY  P+ E E+    E           +P +  ELV RR  AKE ++W LAD  R  + +  G  +KD KG
Sbjct:   71 LSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDVLKRVLRYLGYHVTHVCNLTDVDDKIIQRANEQKIDHVQTLTRRYEQHFRDDLQALNIQPACQYPRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGTQLVQLNYQEM---AQTERGESDDKEHFAD------FCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTIDLHGGGIDLKFPHHENEIAQSEGATGNVFCNCWFHNGFVNMDNEKMSKSLGNFLTLRGACPTPDDVRAYRYLAVSSQYRQALAFTPQAMTAARNAIARMDKIKNQLEECTRVNGASVVDETTDSELPTVARTALENFEVAICDDLSMPRASAALFSLVKAAEGELKRVNKVSDDEVSLDYTGLRRILDAMKQMDQVFGIFYRVPVSEEEETAQEEALV--------IPDDVVELVERRTAAKEAKDWELADALRSQV-TELGYAVKDVKG 560          
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|1072233696|gb|OEU18426.1| (cysteinyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 425.246 bits (1092), Expect = 5.411e-140
Identity = 233/518 (44.98%), Postives = 309/518 (59.65%), Query Frame = 0
Query:   85 TNDIP-FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGL---SLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYG-SLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKA----EDGPVFWET--ALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVA----GFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSR---FGLILKDKKGG 583
             +DIP   L+NT SR KE  KT  P KVS Y+CGPT+YD+AH+GNFRAFLTYD++KR LLY GYDV H+CNLTDVDDKII R   + L    + ELT KF   FFEDL+ALNV+ A  YPRAT+HI +++ M+  L ++  AYE+  GS+YF  S    YG  L +L+   MEM     G           K + +DFALWKAYK     ED    WE    + KGRPGWH+ECSAMAR++LG T+D+H GG DL FPHHENEIAQSEGA+G  FC CWVHNGFVN+ +EKMSKS GNFLTLR +     DVRAFR+L+++SQY+  L++ ++G+  +++ + R+DKV   +           +    D++ + ++D  +A     FE  + DDL+ PRA+A+LF+L+K  E   K      +   A    A  E  +           ME                   V  +  +LV +R +AKE ++W LAD     LR+R    G ++KD KGG
Sbjct:   19 NDDIPDLILFNTKSRSKESLKTIVPRKVSMYTCGPTVYDYAHVGNFRAFLTYDLVKRVLLYFGYDVTHICNLTDVDDKIINRANENKLPNGKISELTLKFENYFFEDLKALNVILADKYPRATDHIPEMMDMILELAEKDLAYETDDGSWYFATSNKEGYGEQLVQLNRDEMEMSTKSVGNDM--------KRNYQDFALWKAYKENVDREDAT--WELPGKIQKGRPGWHVECSAMARKYLGDTIDIHGGGCDLQFPHHENEIAQSEGATGTTFCNCWVHNGFVNINDEKMSKSLGNFLTLRTACPKPDDVRAFRFLIMSSQYQKQLSYTSDGMVASKRALKRIDKVMQQINDSIIRKSDTTDTESDDQQKKSLLDNDIAKNLENFEKALLDDLSMPRASASLFSLIKIAENEFK------QEEEAAAAAAASEDDNNNNNTDSNNNNME-------------------VMDKVMDLVAKRTDAKEAKDWDLADS----LRTRIVELGFVVKDVKGG 497          
The following BLAST results are available for this feature:
BLAST of EWM30518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113182|gb|EWM30518.1|0.000e+0100.00cysteinyl-trna synthetase [Nannochloropsis gaditan... [more]
gi|298710863|emb|CBJ26372.1|0.000e+059.84Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus][more]
gi|551632937|ref|XP_005819331.1|1.031e-17461.71hypothetical protein GUITHDRAFT_82387 [Guillardia ... [more]
gi|397646936|gb|EJK77487.1|6.120e-17148.24hypothetical protein THAOC_00680, partial [Thalass... [more]
gi|546313435|ref|XP_005715284.1|1.186e-16752.51Cysteinyl-tRNA Synthetase [Chondrus crispus] >gi|5... [more]
gi|873240621|emb|CEL93242.1|3.386e-15946.35unnamed protein product [Vitrella brassicaformis C... [more]
gi|223996950|ref|XP_002288148.1|1.015e-15449.41probable cysteinyl-trna synthetase, partial [Thala... [more]
gi|544210308|ref|XP_005535555.1|2.209e-15246.93cysteine--tRNA ligase, chloroplast or mitochondria... [more]
gi|219114520|ref|XP_002176430.1|1.272e-14949.02predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072233696|gb|OEU18426.1|5.411e-14044.98cysteinyl-tRNA synthetase [Fragilariopsis cylindru... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna213rna213Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications