EWM30518.1, cds213 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|585113182|gb|EWM30518.1| (cysteinyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 1215.29 bits (3143), Expect = 0.000e+0 Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0 Query: 1 MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE 590 MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE Sbjct: 1 MPCGPSLVVGLSRHESPRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVRE 590
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|298710863|emb|CBJ26372.1| (Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]) HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0 Identity = 307/513 (59.84%), Postives = 375/513 (73.10%), Query Frame = 0 Query: 90 FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEG--GEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK---------------GDSP--RLRPS-GARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKG 582 L+NT R KE F+ +V FYSCGPT+YD AHIGNFRAFLTYDVLKRWLLY G++V+HVCNLTDVDDKII RMARDG+SL ELT K+A++FF+DL++LN++PAS YPRATEHI DIV MVQ L+D+ AY+ GS YFRVS+ YG+LA LD SGME GA +GGG++DA E+ ++K DAKDFALWK YK EDG VFW+T LGKGRPGWHIECSAMAR+FLG T+D+HAGG+DLVFPHHENE+AQSEG +G+ FCRCWVHN FVNV+ EKMSKSKGNFLTL+ +L T LDVRAFRYLVV+SQYR L F+ + L A+ T+ RLDK++ AL A G E G E+ E+ V+ K++ GF+AGM DDLNTPRAAA+LF +VKA E ALK G SP L P A+ +LA L++MD+V GIFYEP E GG G + AD+P E EL+ RR A+E ++WA AD RD +++ G +KD KG Sbjct: 19 LMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAAGNEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAAASLFAVVKAGENALKRVRSANADGGDTAAAGGSPPQSLLPQVDAKYLLAALDRMDSVFGIFYEPAGYEAANTGGDSGGDG---KEADLPGEMAELLARRLAARENKDWATADAVRDEIKA-LGYSVKDVKG 527
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|551632937|ref|XP_005819331.1| (hypothetical protein GUITHDRAFT_82387 [Guillardia theta CCMP2712] >gi|428163271|gb|EKX32351.1| hypothetical protein GUITHDRAFT_82387 [Guillardia theta CCMP2712]) HSP 1 Score: 511.146 bits (1315), Expect = 1.031e-174 Identity = 253/410 (61.71%), Postives = 300/410 (73.17%), Query Frame = 0 Query: 90 FQLYNTASRKKEPFK-TGQPGK-VSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGV----------IDKAVA-GFEAGMADDLNTPRAAAALFTLVKATEKALKGD 486 F++YNT SR KE F+ + GK V Y+CGPTIYDFAHIGNFRAFLTYDVLKRWLLY GYDV+H+CNLTDVDDKII+RM RD + L ELT+KFA FF+DL+ LN++PA YPRATEHI DIV M+ LV +G AYE GS+YF VS FP YG LA+LDF M GA++GGGI+D + + +K +KDFALWKAYK EDG V WET L KGRPGWHIECSAM+RR+LG + D+HAGGVDL FPHHENEIAQSE G ++CR WVHNGFVN+ NEKMSKS GNFLTLR + + D RAFRYLVV+SQYR LNF + L GAR T+ RLDK + RE + A EGG ++ ++K+ A + GM DDLNTPRA AALFT +K+TEK L D Sbjct: 22 FKIYNTLSRDKETFEPMCEDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVEMINGLVQKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMMDGASEGGGITDREGF--EKKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKRR-------REKEEAAEGGRWEDNRMEEEAEERAESLQVEKSAARSLDGGMMDDLNTPRACAALFTFIKSTEKLLNTD 422
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|397646936|gb|EJK77487.1| (hypothetical protein THAOC_00680, partial [Thalassiosira oceanica]) HSP 1 Score: 510.76 bits (1314), Expect = 6.120e-171 Identity = 287/595 (48.24%), Postives = 377/595 (63.36%), Query Frame = 0 Query: 17 PRRLMPWSISIIICLVALMKIVHGFVPPSKRPSSTQIGRCRRQARLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYGS-LAKLDFSGMEMGA-AKGGGIS------DADEYVADKGDAKDFALWKAYKAE--------DGPVFWETA----LGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEE--GGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK-----GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGG 583 PRR ++ + ++A + F P S R SS + R +R+ + + +S + G+ A + N LYN+ SR K PF+ P VS Y+CGPT+YD+AH+GNFRAFLTYDVLKR L Y GY+V+H+CNLTDVDDKIIKR R+ +SL +LT K++++FF+DL+ALN++ A YPRAT++I ++ ++ L G +Y+S+ GS+YF V + YG+ L +LD M+ GA A+ GG DADEY ADK +DF LWKAYK E D V E +GKGRPGWH+ECSAMARR+LGPT+DLHAGGVDL FPHHENEIAQSEGA+ FC CWVHNGFVN+ NEKMSKSKGNFLTLR + + DVRA+RYLVV+SQYR PL+F E L+ A+ + RLD+VK+ + E A E GGE EM ++ +A FEA +ADDL+ PRA+A+LF++VKA EK K D L G R L + +MD V GIFY+ P + G++ EE + VP +LVM+R AKE ++W LAD R +R G +KD KGG Sbjct: 7 PRRKSQQTMRALF-VIASISCSSAFAP-STRYSSYK--RAKRKLGRPSALNSASDQSKGTVAAAAPRTLN-----LYNSLSRTKLPFEPASPPYVSMYTCGPTVYDYAHVGNFRAFLTYDVLKRALTYLGYNVDHICNLTDVDDKIIKRCDRENVSLMDLTTKYSQLFFDDLEALNIIKAREYPRATDNIDEMAKLIIDLERNGLSYQSEEGSWYFSVDKKDGYGTNLVQLDVGQMKKGASAETGGAGAQRGNLDADEYDADKEGVRDFCLWKAYKPEFDRDDATWDPVVTLEDGATKNIGKGRPGWHLECSAMARRYLGPTIDLHAGGVDLKFPHHENEIAQSEGANCAPFCNCWVHNGFVNIGNEKMSKSKGNFLTLRTACPSADDVRAYRYLVVSSQYRNPLSFTDEALSAAKGALKRLDRVKSNIV----EALDANEVTGGE--SEMTTLVGSQLANFEAAIADDLSMPRASASLFSIVKAAEKEFKRFAKSDDDGALDLGGLRCALDAINKMDQVFGIFYDVPAVNGDEASSSEE------DDLSVPGNVLDLVMQRTAAKEAKDWELADSLRTKIR-ELGFAVKDVKGG 579
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|546313435|ref|XP_005715284.1| (Cysteinyl-tRNA Synthetase [Chondrus crispus] >gi|507111754|emb|CDF35465.1| Cysteinyl-tRNA Synthetase [Chondrus crispus]) HSP 1 Score: 495.738 bits (1275), Expect = 1.186e-167 Identity = 262/499 (52.51%), Postives = 329/499 (65.93%), Query Frame = 0 Query: 92 LYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDF--SGMEMGAAKG--GGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVE 586 LYNT SR KE F T +PG V FYSCGPT+YD+AHIGNFRAFLTYDV+KRWLL GYD++HV NLTD+DDKII+++ G SL ELT+K+A FF DL LNV+PA YPRATEHI++I V LV RGYAYE GS YF V++F SYG LA+L+ G AA+ G D+D+Y DK D +DFALWK+YK D +FW++ LGKGRPGWHIEC+ MA ++LGP +D+H GG+DLVFPHHENE+AQSE +G F R WVHNGFVN+ NEKMSKS GNF TLR + D RAFRYLVV+SQYR L F + L AR T+ RLD ++ L E G +GGE E++ VI KA F GM DD NTPRAAAA+F++V A EK LK + +G+ L L+ MD V GIFY P++ G E A+ P +L+ R A++ +++A ADE RD + + I+ +G +E Sbjct: 22 LYNTLSRTKEAFTTVEPGVVRFYSCGPTVYDYAHIGNFRAFLTYDVIKRWLLCRGYDIKHVMNLTDIDDKIIRKVRELGCSLDELTNKYADAFFADLDLLNVIPAQQYPRATEHIKEIEETVGGLVKRGYAYERDGSTYFSVAKFESYGRLAQLEKREKGSRTAAAEATEGENIDSDDY--DKADMRDFALWKSYKTNDAGIFWDSPLGKGRPGWHIECTCMAIKYLGPELDIHGGGIDLVFPHHENELAQSEALTGRPFSRFWVHNGFVNINNEKMSKSLGNFQTLRDIAKKPDDARAFRYLVVSSQYRSALAFTDQSLKSARSTVKRLDALRKRL-----ESAGG-DGGE--EDIAEVIAKAKENFARGMDDDFNTPRAAAAMFSVVNAAEKMLKAKKMNEKAAGS--CLKCLDDMDRVFGIFYN-PVIPGTTSASASEPP------AEAPLHLVKLLDERKTARKAKDFARADEIRDQVSAEGFAIVDTPQGPKLE 501
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|873240621|emb|CEL93242.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 477.248 bits (1227), Expect = 3.386e-159 Identity = 260/561 (46.35%), Postives = 345/561 (61.50%), Query Frame = 0 Query: 76 STARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGK----------VSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-------------GSFYFRVSRFPSYGSLAKLDF-SGMEMGAAK--GGGISDADEYVADKGDA--------KDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAAL-TRVAREGKGAEE--GGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVV-------VELADV----PKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIV 588 ST + + D F+L++T R K F G P V FYSCGPT+YD AHIGNFRAFLTYD+LKR+L+Y GY V HVCNLTDVDDKII+RM +G+S ELT+ + ++FF+D++ALNVLPA+HYPRA+++I + +M+Q L+D G AY +Q S YF VS+ YG L F SG+ G + G +++E +D DA +DFALWKAYK EDG V+W + G+GRPGWHIECSAMA+ LG T+D+HAGG+DL+FPHHENEIAQSEGASG+ FCR WVHNGFVN+ EKMSKSK NFLTLR T DVRAFR+LVV S YR PLNF+ L AR ++ RLD + L A+E ++ G+ + ++ + V FEA + DDLNTPRA AA+F L+ E+AL+ L G + V + L++MD+V G++Y+P G E G EG V+L ++ P E LV RA+AK +++ AD+ R + + G +KD G +E+ Sbjct: 27 STVSGSSIGSADRRFRLFDTGERTKRSFDAGMPSSSAAPLDSERVVRFYSCGPTVYDAAHIGNFRAFLTYDLLKRFLIYLGYTVVHVCNLTDVDDKIIQRMRDEGVSRTELTNTYTQLFFQDIKALNVLPATHYPRASDYIPQMQAMIQTLIDNGLAYTAQEQPRQQGAIELPAASVYFNVSKCERYGVLTDRRFLSGIRAGGGERDGSASEESEEVASDHADAAGTGKVEAEDFALWKAYKEEDGDVWWNSPWGRGRPGWHIECSAMAKALLGDTIDIHAGGIDLIFPHHENEIAQSEGASGQPFCRYWVHNGFVNINQEKMSKSKRNFLTLRQCCPTKDDVRAFRFLVVGSNYRRPLNFSAAALQSARNSVRRLDAFRRRLKAAAAQEAPHLQDLPSGDWNAQLINASSECVNDFEAHLLDDLNTPRAFAAMFKLIATCERALQECQGALLGEGLKGVSSALDRMDSVFGLWYDPVEWGGAPEDGTSEGETSETIRLDPRVDLPEMLEGFPAEILLLVEERAKAKSVKDYQAADKLRTEIET-LGFSVKDLSNGMIELA 586
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|223996950|ref|XP_002288148.1| (probable cysteinyl-trna synthetase, partial [Thalassiosira pseudonana CCMP1335] >gi|220975256|gb|EED93584.1| probable cysteinyl-trna synthetase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 461.455 bits (1186), Expect = 1.015e-154 Identity = 253/512 (49.41%), Postives = 323/512 (63.09%), Query Frame = 0 Query: 90 FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYGS-LAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAE--DGPVFWET-----ALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK---------GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGG 583 LYN+ +R K PF + VS Y+CGPT+YD AH+GNFRAFLTYDVLKR LLY GYDV+HVCNLTDVDDKIIKR R+G+SL ELT KF FFEDL+ALN++ A YPRATEHI ++ ++ L G AY+S+ GS+YF VS+ YG+ L +LD +++GA+ G DADEY +K +DF LWKAYK E W+ +G+GRPGWH+ECSAMAR++LG T+DLHAGGVDL FPHHENEIAQSEGA+ FC CW+HNGFVN+ +EKMSKSKGNFLTLRG+ T DVRA+RYLVV+SQYR PL+F L A+ + RLDKVK L A E G E++ FE +ADDL+ PRA+A LF++VKA EK K ++P L G + V L+ MD V ++P++ +LV++R+ AK+ ++W LAD R + + G +KD KGG Sbjct: 1 LTLYNSLTRSKTPFTPLRSPSVSMYTCGPTVYDSAHVGNFRAFLTYDVLKRVLLYLGYDVDHVCNLTDVDDKIIKRCEREGVSLIELTRKFEGKFFEDLEALNIIKAREYPRATEHIDEMAKLILDLERNGLAYQSEEGSWYFSVSKKEGYGTRLVQLDPEQLKIGASAQRGSLDADEYDTEKEGVRDFCLWKAYKPEFDREDATWDPDGVTRNIGRGRPGWHLECSAMARKYLGDTIDLHAGGVDLKFPHHENEIAQSEGANCAPFCNCWIHNGFVNIGDEKMSKSKGNFLTLRGACPTADDVRAYRYLVVSSQYRNPLSFTDAALGAAKGALKRLDKVKTLLDE-ALESSNDNSGDASAEKL--------TNFEVAIADDLSMPRASACLFSIVKAAEKEFKRVDKAKDEDDNAPPLDLVGLQRVRDALDLMDNVF----------------------------EIPQDVMDLVVQRSAAKDAKDWDLADSLRTRI-TELGFAVKDVKGG 474
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|544210308|ref|XP_005535555.1| (cysteine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D] >gi|449015867|dbj|BAM79269.1| cysteine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 458.759 bits (1179), Expect = 2.209e-152 Identity = 252/537 (46.93%), Postives = 342/537 (63.69%), Query Frame = 0 Query: 63 RTVFSMSSISASGSTARSRNFL---TNDIPFQ------LYNTASRKKEPFKTGQP-GKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGAVEIVR 589 R V ++ GS++RS L ND+ + YNT SR+KEPF+T G V FYSCGPT+YD+AHIGNFRAFLTYD++KRWL++ GY V HV N+TDVDDKII+R R+ ++T +FA FF+DL+ALN++PA YP AT HI D+ +V+ L+ RG+AY+ S Y+ V RF YG+LA+++F + + G DA + A K D +DF LWK +K +DG V W+T +G GRPGWH EC+AMA ++LG +VD+HAGG DLVFPHHENEIAQ E +G F R W+HNGFVN+ EKMSKS GN++TLR + LD RAFRY V+TS YRMPLNF + L A T+ RLD + ++ + R + + G + D+ ++ + + F MADDLNT RAAA +F ++ E AL+ D+ RLRP+ A L+L L +MD V G+FYEP L E P +P E EL RA+A+ +R++A+AD+ R+ LR +G ++D G EI R Sbjct: 35 RRVCKQVTMQRRGSSSRSHGRLRCAENDLAWYARARTVFYNTLSRRKEPFETSSADGVVRFYSCGPTVYDYAHIGNFRAFLTYDLVKRWLMFCGYKVRHVMNITDVDDKIIQRSQREQRRAEDITRQFAAEFFQDLKALNIIPADAYPCATAHIDDMADLVRELLSRGFAYKLGDSVYYSVERFARYGTLARINFESL---LSSNGEEEDAGPHTALKRDPRDFVLWKGHKPDDGDVKWDTPIGCGRPGWHTECAAMAMKYLGSSVDIHAGGSDLVFPHHENEIAQCEAVTGTMFARFWIHNGFVNINGEKMSKSLGNYITLRDLVRDPLDARAFRYAVITSLYRMPLNFTDDTLGAAATTLRRLDLFRKSIIDLER-SEASTPGQKADQGLRASCEAYLRDFCDHMADDLNTARAAAVIFEALRHFE-ALRRDA-RLRPADASLILGMLREMDRVFGVFYEPELAHLS-----ETSEPSST---GIPPEVLELARLRADARARRDFAMADKLREQLRL-YGFAVRDTAQGP-EITR 555
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|219114520|ref|XP_002176430.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402676|gb|EEC42666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 451.825 bits (1161), Expect = 1.272e-149 Identity = 249/508 (49.02%), Postives = 314/508 (61.81%), Query Frame = 0 Query: 90 FQLYNTASRKKEPFKT--GQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLS-LPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYES-QGSFYFRVSRFPSYGS-LAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKA--EDGPVFWETA-LGKGRPGWHIECSAMARRFLGP-TVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALK------GDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKG 582 L+N+ +R KEPF+ VS Y+CGPT+YDFAH+GNFRAFLTYDVLKR L Y GY V HVCNLTDVDDKII+R + + LT ++ + F +DLQALN+ PA YPRATEHI D++ +++ L D+ AYE+ GS+YFR P YG+ L +L++ M A G SD E+ AD F LWKA+K + WE+ + GRPGWH+ECSAMAR F G T+DLH GG+DL FPHHENEIAQSEGA+G FC CW HNGFVN++NEKMSKS GNFLTLRG+ T DVRA+RYL V+SQYR L F + + AR I R+DK+K L R + D E+ V A+ FE + DDL+ PRA+AALF+LVKA E LK D L +G R +L ++QMD V GIFY P+ E E+ E +P + ELV RR AKE ++W LAD R + + G +KD KG Sbjct: 71 LSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDVLKRVLRYLGYHVTHVCNLTDVDDKIIQRANEQKIDHVQTLTRRYEQHFRDDLQALNIQPACQYPRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGTQLVQLNYQEM---AQTERGESDDKEHFAD------FCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTIDLHGGGIDLKFPHHENEIAQSEGATGNVFCNCWFHNGFVNMDNEKMSKSLGNFLTLRGACPTPDDVRAYRYLAVSSQYRQALAFTPQAMTAARNAIARMDKIKNQLEECTRVNGASVVDETTDSELPTVARTALENFEVAICDDLSMPRASAALFSLVKAAEGELKRVNKVSDDEVSLDYTGLRRILDAMKQMDQVFGIFYRVPVSEEEETAQEEALV--------IPDDVVELVERRTAAKEAKDWELADALRSQV-TELGYAVKDVKG 560
BLAST of EWM30518.1 vs. NCBI_GenBank
Match: gi|1072233696|gb|OEU18426.1| (cysteinyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 425.246 bits (1092), Expect = 5.411e-140 Identity = 233/518 (44.98%), Postives = 309/518 (59.65%), Query Frame = 0 Query: 85 TNDIP-FQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGL---SLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQ-GSFYFRVSRFPSYG-SLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKA----EDGPVFWET--ALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVA----GFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSR---FGLILKDKKGG 583 +DIP L+NT SR KE KT P KVS Y+CGPT+YD+AH+GNFRAFLTYD++KR LLY GYDV H+CNLTDVDDKII R + L + ELT KF FFEDL+ALNV+ A YPRAT+HI +++ M+ L ++ AYE+ GS+YF S YG L +L+ MEM G K + +DFALWKAYK ED WE + KGRPGWH+ECSAMAR++LG T+D+H GG DL FPHHENEIAQSEGA+G FC CWVHNGFVN+ +EKMSKS GNFLTLR + DVRAFR+L+++SQY+ L++ ++G+ +++ + R+DKV + + D++ + ++D +A FE + DDL+ PRA+A+LF+L+K E K + A A E + ME V + +LV +R +AKE ++W LAD LR+R G ++KD KGG Sbjct: 19 NDDIPDLILFNTKSRSKESLKTIVPRKVSMYTCGPTVYDYAHVGNFRAFLTYDLVKRVLLYFGYDVTHICNLTDVDDKIINRANENKLPNGKISELTLKFENYFFEDLKALNVILADKYPRATDHIPEMMDMILELAEKDLAYETDDGSWYFATSNKEGYGEQLVQLNRDEMEMSTKSVGNDM--------KRNYQDFALWKAYKENVDREDAT--WELPGKIQKGRPGWHVECSAMARKYLGDTIDIHGGGCDLQFPHHENEIAQSEGATGTTFCNCWVHNGFVNINDEKMSKSLGNFLTLRTACPKPDDVRAFRFLIMSSQYQKQLSYTSDGMVASKRALKRIDKVMQQINDSIIRKSDTTDTESDDQQKKSLLDNDIAKNLENFEKALLDDLSMPRASASLFSLIKIAENEFK------QEEEAAAAAAASEDDNNNNNTDSNNNNME-------------------VMDKVMDLVAKRTDAKEAKDWDLADS----LRTRIVELGFVVKDVKGG 497 The following BLAST results are available for this feature:
BLAST of EWM30518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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